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This page was generated on 2023-01-29 16:33:36 -0000 (Sun, 29 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4021
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BUILD results for BiocParallel on kunpeng1


To the developers/maintainers of the BiocParallel package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiocParallel.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 167/2162HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocParallel 1.33.9  (landing page)
Martin Morgan
Snapshot Date: 2023-01-27 13:09:27 -0000 (Fri, 27 Jan 2023)
git_url: https://git.bioconductor.org/packages/BiocParallel
git_branch: master
git_last_commit: 73151e6
git_last_commit_date: 2022-12-23 15:32:55 -0000 (Fri, 23 Dec 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: BiocParallel
Version: 1.33.9
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel
StartedAt: 2023-01-28 05:55:20 -0000 (Sat, 28 Jan 2023)
EndedAt: 2023-01-28 05:56:35 -0000 (Sat, 28 Jan 2023)
EllapsedTime: 75.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel
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* checking for file ‘BiocParallel/DESCRIPTION’ ... OK
* preparing ‘BiocParallel’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Introduction_To_BiocParallel.Rmd’ using rmarkdown
Quitting from lines 360-362 (Introduction_To_BiocParallel.Rmd) 
Error: processing vignette 'Introduction_To_BiocParallel.Rmd' failed with diagnostics:
there is no package called 'RNAseqData.HNRNPC.bam.chr14'
--- failed re-building ‘Introduction_To_BiocParallel.Rmd’

--- re-building ‘Random_Numbers.Rmd’ using rmarkdown
--- finished re-building ‘Random_Numbers.Rmd’

--- re-building ‘BiocParallel_BatchtoolsParam.Rnw’ using knitr
--- finished re-building ‘BiocParallel_BatchtoolsParam.Rnw’

--- re-building ‘Errors_Logs_And_Debugging.Rnw’ using knitr
--- finished re-building ‘Errors_Logs_And_Debugging.Rnw’

SUMMARY: processing the following file failed:
  ‘Introduction_To_BiocParallel.Rmd’

Error: Vignette re-building failed.
Execution halted