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This page was generated on 2023-01-29 16:33:46 -0000 (Sun, 29 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4021
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BUILD results for EpiMix on kunpeng1


To the developers/maintainers of the EpiMix package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EpiMix.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 613/2162HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EpiMix 1.1.0  (landing page)
Yuanning Zheng
Snapshot Date: 2023-01-27 13:09:27 -0000 (Fri, 27 Jan 2023)
git_url: https://git.bioconductor.org/packages/EpiMix
git_branch: master
git_last_commit: 182edea
git_last_commit_date: 2022-11-01 15:27:17 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: EpiMix
Version: 1.1.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EpiMix
StartedAt: 2023-01-28 08:18:16 -0000 (Sat, 28 Jan 2023)
EndedAt: 2023-01-28 08:28:40 -0000 (Sat, 28 Jan 2023)
EllapsedTime: 624.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EpiMix
###
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* checking for file ‘EpiMix/DESCRIPTION’ ... OK
* preparing ‘EpiMix’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Methylation_Modeling.Rmd’ using rmarkdown
trying URL 'https://egg2.wustl.edu/roadmap/data/byFileType/chromhmmSegmentations/ChmmModels/core_K27ac/jointModel/final/E096_18_core_K27ac_hg38lift_mnemonics.bed.gz'
Content type 'application/x-gzip' length 3835377 bytes (3.7 MB)
==================================================
downloaded 3.7 MB

Quitting from lines 314-316 (Methylation_Modeling.Rmd) 
Error: processing vignette 'Methylation_Modeling.Rmd' failed with diagnostics:
Failed to connect to gdac.broadinstitute.org port 80 after 295 ms: Connection refused
--- failed re-building ‘Methylation_Modeling.Rmd’

SUMMARY: processing the following file failed:
  ‘Methylation_Modeling.Rmd’

Error: Vignette re-building failed.
Execution halted