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This page was generated on 2023-01-29 16:33:50 -0000 (Sun, 29 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4021
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BUILD results for GenomicFeatures on kunpeng1


To the developers/maintainers of the GenomicFeatures package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GenomicFeatures.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 773/2162HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicFeatures 1.51.4  (landing page)
H. Pagès
Snapshot Date: 2023-01-27 13:09:27 -0000 (Fri, 27 Jan 2023)
git_url: https://git.bioconductor.org/packages/GenomicFeatures
git_branch: master
git_last_commit: c864561
git_last_commit_date: 2022-12-15 02:06:06 -0000 (Thu, 15 Dec 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: GenomicFeatures
Version: 1.51.4
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicFeatures
StartedAt: 2023-01-28 08:55:10 -0000 (Sat, 28 Jan 2023)
EndedAt: 2023-01-28 08:56:46 -0000 (Sat, 28 Jan 2023)
EllapsedTime: 95.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicFeatures
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* checking for file ‘GenomicFeatures/DESCRIPTION’ ... OK
* preparing ‘GenomicFeatures’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GenomicFeatures.Rmd’ using knitr
Quitting from lines 355-358 (GenomicFeatures.Rmd) 
Error: processing vignette 'GenomicFeatures.Rmd' failed with diagnostics:
there is no package called 'BSgenome.Hsapiens.UCSC.hg19'
--- failed re-building ‘GenomicFeatures.Rmd’

SUMMARY: processing the following file failed:
  ‘GenomicFeatures.Rmd’

Error: Vignette re-building failed.
Execution halted