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This page was generated on 2023-01-29 16:34:09 -0000 (Sun, 29 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4021
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BUILD results for Rbwa on kunpeng1


To the developers/maintainers of the Rbwa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rbwa.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 1594/2162HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rbwa 1.3.0  (landing page)
Jean-Philippe Fortin
Snapshot Date: 2023-01-27 13:09:27 -0000 (Fri, 27 Jan 2023)
git_url: https://git.bioconductor.org/packages/Rbwa
git_branch: master
git_last_commit: 192e8ae
git_last_commit_date: 2022-11-01 15:26:35 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  ERROR    ERROR  skipped

Summary

Package: Rbwa
Version: 1.3.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rbwa
StartedAt: 2023-01-28 13:22:16 -0000 (Sat, 28 Jan 2023)
EndedAt: 2023-01-28 13:22:18 -0000 (Sat, 28 Jan 2023)
EllapsedTime: 2.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rbwa
###
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* checking for file ‘Rbwa/DESCRIPTION’ ... OK
* preparing ‘Rbwa’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘Rbwa’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -Wall -O2 -c utils.c -o utils.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -Wall -O2 -c kthread.c -o kthread.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -Wall -O2 -c kstring.c -o kstring.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -Wall -O2 -c ksw.c -o ksw.o
ksw.c:29:10: fatal error: emmintrin.h: No such file or directory
   29 | #include <emmintrin.h>
      |          ^~~~~~~~~~~~~
compilation terminated.
make: *** [/home/biocbuild/bbs-3.17-bioc/R/etc/Makeconf:191: ksw.o] Error 1
ERROR: compilation failed for package ‘Rbwa’
* removing ‘/tmp/RtmpFOAHdf/Rinst1b29796ce50a50/Rbwa’
      -----------------------------------
ERROR: package installation failed