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This page was generated on 2023-01-29 16:34:01 -0000 (Sun, 29 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4021 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the msPurity package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/msPurity.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1267/2162 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| msPurity 1.25.0 (landing page) Thomas N. Lawson
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | ERROR | skipped | |||||||||
| Package: msPurity |
| Version: 1.25.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data msPurity |
| StartedAt: 2023-01-28 11:37:26 -0000 (Sat, 28 Jan 2023) |
| EndedAt: 2023-01-28 11:38:10 -0000 (Sat, 28 Jan 2023) |
| EllapsedTime: 44.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data msPurity
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* checking for file ‘msPurity/DESCRIPTION’ ... OK
* preparing ‘msPurity’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd’ using rmarkdown
Quitting from lines 38-52 (msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd)
Error: processing vignette 'msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd' failed with diagnostics:
No NetCDF/mzXML/mzML files were found.
--- failed re-building ‘msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd’
--- re-building ‘msPurity-spectral-database-vignette.Rmd’ using rmarkdown
--- finished re-building ‘msPurity-spectral-database-vignette.Rmd’
--- re-building ‘msPurity-vignette.Rmd’ using rmarkdown
Quitting from lines 107-110 (msPurity-vignette.Rmd)
Error: processing vignette 'msPurity-vignette.Rmd' failed with diagnostics:
trying to get slot "puritydf" from an object of a basic class ("NULL") with no slots
--- failed re-building ‘msPurity-vignette.Rmd’
SUMMARY: processing the following files failed:
‘msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd’
‘msPurity-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted