| Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-01-29 16:34:08 -0000 (Sun, 29 Jan 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4021 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the rawrr package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rawrr.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1583/2162 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rawrr 1.7.0 (landing page) Christian Panse
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | ERROR | skipped | |||||||||
| Package: rawrr |
| Version: 1.7.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rawrr |
| StartedAt: 2023-01-28 13:20:31 -0000 (Sat, 28 Jan 2023) |
| EndedAt: 2023-01-28 13:21:15 -0000 (Sat, 28 Jan 2023) |
| EllapsedTime: 44.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rawrr ### ############################################################################## ############################################################################## * checking for file ‘rawrr/DESCRIPTION’ ... OK * preparing ‘rawrr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘rawrr.Rmd’ using rmarkdown trying URL 'https://github.com/thermofisherlsms/ThermoRawFileParser/raw/master/packages/ThermoFisher.CommonCore.RawFileReader.4.0.26/lib//ThermoFisher.CommonCore.Data.dll' Content type 'application/octet-stream' length 360448 bytes (352 KB) ================================================== downloaded 352 KB trying URL 'https://github.com/thermofisherlsms/ThermoRawFileParser/raw/master/packages/ThermoFisher.CommonCore.RawFileReader.4.0.26/lib//ThermoFisher.CommonCore.MassPrecisionEstimator.dll' Content type 'application/octet-stream' length 11264 bytes (11 KB) ================================================== downloaded 11 KB trying URL 'https://github.com/thermofisherlsms/ThermoRawFileParser/raw/master/packages/ThermoFisher.CommonCore.RawFileReader.4.0.26/lib//ThermoFisher.CommonCore.RawFileReader.dll' Content type 'application/octet-stream' length 620544 bytes (606 KB) ================================================== downloaded 606 KB trying URL 'http://fgcz-ms.uzh.ch/~cpanse/rawrr/rawrr.1.5.3.exe' Content type 'application/x-msdos-program' length 28672 bytes (28 KB) ================================================== downloaded 28 KB The magick package is required to crop "/tmp/RtmpY2rswo/Rbuild1b1f4c15976aaa/rawrr/vignettes/rawrr_files/figure-html/plotrawrrspectrum-1.png" but not available. The magick package is required to crop "/tmp/RtmpY2rswo/Rbuild1b1f4c15976aaa/rawrr/vignettes/rawrr_files/figure-html/plotSN-1.png" but not available. Quitting from lines 189-192 (rawrr.Rmd) Error: processing vignette 'rawrr.Rmd' failed with diagnostics: no lines available in input --- failed re-building ‘rawrr.Rmd’ SUMMARY: processing the following file failed: ‘rawrr.Rmd’ Error: Vignette re-building failed. Execution halted