Back to Build/check report for BioC 3.17
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2023-01-29 16:34:09 -0000 (Sun, 29 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4021
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for recount3 on kunpeng1


To the developers/maintainers of the recount3 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/recount3.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1621/2162HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
recount3 1.9.1  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2023-01-27 13:09:27 -0000 (Fri, 27 Jan 2023)
git_url: https://git.bioconductor.org/packages/recount3
git_branch: master
git_last_commit: 7c4e68e
git_last_commit_date: 2023-01-11 17:20:44 -0000 (Wed, 11 Jan 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: recount3
Version: 1.9.1
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data recount3
StartedAt: 2023-01-28 13:25:17 -0000 (Sat, 28 Jan 2023)
EndedAt: 2023-01-28 13:32:13 -0000 (Sat, 28 Jan 2023)
EllapsedTime: 416.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data recount3
###
##############################################################################
##############################################################################


* checking for file ‘recount3/DESCRIPTION’ ... OK
* preparing ‘recount3’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘recount3-quickstart.Rmd’ using rmarkdown
Quitting from lines 161-176 (recount3-quickstart.Rmd) 
Error: processing vignette 'recount3-quickstart.Rmd' failed with diagnostics:
not all 'rnames' found or unique.
--- failed re-building ‘recount3-quickstart.Rmd’

SUMMARY: processing the following file failed:
  ‘recount3-quickstart.Rmd’

Error: Vignette re-building failed.
Execution halted