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This page was generated on 2023-01-29 16:34:15 -0000 (Sun, 29 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4021
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BUILD results for sitadela on kunpeng1


To the developers/maintainers of the sitadela package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sitadela.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 1879/2162HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sitadela 1.7.0  (landing page)
Panagiotis Moulos
Snapshot Date: 2023-01-27 13:09:27 -0000 (Fri, 27 Jan 2023)
git_url: https://git.bioconductor.org/packages/sitadela
git_branch: master
git_last_commit: 23f5097
git_last_commit_date: 2022-11-01 15:24:14 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: sitadela
Version: 1.7.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data sitadela
StartedAt: 2023-01-28 15:14:53 -0000 (Sat, 28 Jan 2023)
EndedAt: 2023-01-28 15:16:41 -0000 (Sat, 28 Jan 2023)
EllapsedTime: 108.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data sitadela
###
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* checking for file ‘sitadela/DESCRIPTION’ ... OK
* preparing ‘sitadela’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘sitadela.Rmd’ using rmarkdown
Quitting from lines 190-208 (sitadela.Rmd) 
Error: processing vignette 'sitadela.Rmd' failed with diagnostics:
Transcript annotation for mm10 from ensembl version 100 is required in order to build predefined merged transcript regions for read counting.
Please rerun the addAnnotation function with appropriate parameters.
--- failed re-building ‘sitadela.Rmd’

SUMMARY: processing the following file failed:
  ‘sitadela.Rmd’

Error: Vignette re-building failed.
Execution halted