| Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-02-03 02:35:44 -0000 (Fri, 03 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4039 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the BBCAnalyzer package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BBCAnalyzer.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 127/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BBCAnalyzer 1.29.0 (landing page) Sarah Sandmann
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | ERROR | skipped | |||||||||
| Package: BBCAnalyzer |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BBCAnalyzer |
| StartedAt: 2023-02-01 13:19:31 -0000 (Wed, 01 Feb 2023) |
| EndedAt: 2023-02-01 13:21:10 -0000 (Wed, 01 Feb 2023) |
| EllapsedTime: 99.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BBCAnalyzer
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* checking for file ‘BBCAnalyzer/DESCRIPTION’ ... OK
* preparing ‘BBCAnalyzer’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* saving partial Rd database
* creating vignettes ... ERROR
--- re-building ‘BBCAnalyzer.Rnw’ using Sweave
Error: processing vignette 'BBCAnalyzer.Rnw' failed with diagnostics:
chunk 7 (label = 8)
Error in library("BSgenome.Hsapiens.UCSC.hg19") :
there is no package called ‘BSgenome.Hsapiens.UCSC.hg19’
--- failed re-building ‘BBCAnalyzer.Rnw’
SUMMARY: processing the following file failed:
‘BBCAnalyzer.Rnw’
Error: Vignette re-building failed.
Execution halted