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This page was generated on 2023-02-03 02:36:01 -0000 (Fri, 03 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4039
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BUILD results for GSCA on kunpeng1


To the developers/maintainers of the GSCA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GSCA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 855/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GSCA 2.29.0  (landing page)
Zhicheng Ji
Snapshot Date: 2023-02-01 03:13:00 -0000 (Wed, 01 Feb 2023)
git_url: https://git.bioconductor.org/packages/GSCA
git_branch: master
git_last_commit: d9ee77a
git_last_commit_date: 2022-11-01 15:09:14 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: GSCA
Version: 2.29.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GSCA
StartedAt: 2023-02-01 16:57:36 -0000 (Wed, 01 Feb 2023)
EndedAt: 2023-02-01 16:57:46 -0000 (Wed, 01 Feb 2023)
EllapsedTime: 10.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GSCA
###
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* checking for file ‘GSCA/DESCRIPTION’ ... OK
* preparing ‘GSCA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GSCA.Rnw’ using Sweave
Loading required package: shiny
Loading required package: sp
Loading required package: gplots

Attaching package: ‘gplots’

The following object is masked from ‘package:stats’:

    lowess

Loading required package: ggplot2
Loading required package: reshape2
Loading required package: RColorBrewer
Loading required package: rhdf5
Warning in readChar(con, 5L, useBytes = TRUE) :
  cannot open compressed file '/geneid.rda', probable reason 'No such file or directory'

Error: processing vignette 'GSCA.Rnw' failed with diagnostics:
 chunk 4 
Error in readChar(con, 5L, useBytes = TRUE) : cannot open the connection

--- failed re-building ‘GSCA.Rnw’

SUMMARY: processing the following file failed:
  ‘GSCA.Rnw’

Error: Vignette re-building failed.
Execution halted