Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-02-03 02:36:02 -0000 (Fri, 03 Feb 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4039 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 914/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.5.0 (landing page) Matineh Rahmatbakhsh
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz |
StartedAt: 2023-02-02 09:59:35 -0000 (Thu, 02 Feb 2023) |
EndedAt: 2023-02-02 10:17:08 -0000 (Thu, 02 Feb 2023) |
EllapsedTime: 1053.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck’ * using R Under development (unstable) (2023-01-14 r83615) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.1 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 39.809 0.395 40.924 corr_plot 38.342 0.303 40.340 FSmethod 37.033 0.360 38.347 pred_ensembel 18.368 0.208 19.032 getFASTA 0.886 0.004 8.696 enrichfindP 0.427 0.016 15.100 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 100.640084 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.146552 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 101.917484 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 95.167333 final value 94.466823 converged Fitting Repeat 5 # weights: 103 initial value 108.444920 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 100.164832 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 123.391158 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 96.840247 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 94.756308 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 111.237742 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 128.046586 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 109.623983 final value 94.466823 converged Fitting Repeat 3 # weights: 507 initial value 97.744049 final value 94.466823 converged Fitting Repeat 4 # weights: 507 initial value 103.642888 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 102.047967 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 96.915608 iter 10 value 94.490672 iter 20 value 94.436162 iter 30 value 91.872562 iter 40 value 89.257991 iter 50 value 86.843028 iter 60 value 84.974974 iter 70 value 84.766150 iter 80 value 84.659741 iter 90 value 84.276673 iter 100 value 83.913796 final value 83.913796 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 102.144031 iter 10 value 94.526318 iter 20 value 94.477104 iter 30 value 94.222327 iter 40 value 94.100642 iter 50 value 93.395491 iter 60 value 84.912166 iter 70 value 84.540592 iter 80 value 84.224074 iter 90 value 82.495046 iter 100 value 82.258900 final value 82.258900 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 103.411982 iter 10 value 96.347191 iter 20 value 94.488900 iter 30 value 94.414342 iter 40 value 91.416572 iter 50 value 86.885989 iter 60 value 84.130504 iter 70 value 82.587190 iter 80 value 82.353167 iter 90 value 81.922612 final value 81.904357 converged Fitting Repeat 4 # weights: 103 initial value 99.763009 iter 10 value 94.475621 iter 20 value 94.015252 iter 30 value 93.140405 iter 40 value 91.407811 iter 50 value 91.070613 iter 60 value 85.584994 iter 70 value 85.174079 iter 80 value 82.606715 iter 90 value 82.265977 iter 100 value 82.079931 final value 82.079931 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 96.905256 iter 10 value 94.374337 iter 20 value 91.018895 iter 30 value 83.122013 iter 40 value 82.732359 iter 50 value 82.254218 iter 60 value 81.908193 final value 81.904357 converged Fitting Repeat 1 # weights: 305 initial value 115.528626 iter 10 value 94.475386 iter 20 value 92.262535 iter 30 value 87.885706 iter 40 value 83.112907 iter 50 value 81.474399 iter 60 value 81.191406 iter 70 value 81.178125 iter 80 value 80.911721 iter 90 value 80.768941 iter 100 value 80.684356 final value 80.684356 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.020902 iter 10 value 94.518082 iter 20 value 91.576156 iter 30 value 84.155735 iter 40 value 82.081420 iter 50 value 81.953972 iter 60 value 81.930469 iter 70 value 81.825717 iter 80 value 81.669332 iter 90 value 81.565814 iter 100 value 80.865520 final value 80.865520 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.937915 iter 10 value 94.559781 iter 20 value 94.472359 iter 30 value 94.297215 iter 40 value 93.393653 iter 50 value 87.438054 iter 60 value 82.362817 iter 70 value 82.107259 iter 80 value 81.374291 iter 90 value 81.118630 iter 100 value 81.048093 final value 81.048093 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 121.298992 iter 10 value 94.672004 iter 20 value 91.647288 iter 30 value 88.753665 iter 40 value 85.303700 iter 50 value 83.995837 iter 60 value 83.013656 iter 70 value 82.581035 iter 80 value 82.261361 iter 90 value 82.097456 iter 100 value 81.991233 final value 81.991233 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 111.491916 iter 10 value 94.671462 iter 20 value 93.135937 iter 30 value 90.797773 iter 40 value 85.185572 iter 50 value 84.594549 iter 60 value 84.104296 iter 70 value 84.007501 iter 80 value 83.842732 iter 90 value 82.493241 iter 100 value 81.638511 final value 81.638511 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 131.941446 iter 10 value 94.556966 iter 20 value 92.928783 iter 30 value 87.364272 iter 40 value 84.680849 iter 50 value 83.859145 iter 60 value 83.118500 iter 70 value 82.626020 iter 80 value 82.497183 iter 90 value 82.299108 iter 100 value 81.764705 final value 81.764705 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.709915 iter 10 value 94.393429 iter 20 value 93.214723 iter 30 value 85.871044 iter 40 value 83.115075 iter 50 value 82.401337 iter 60 value 81.356600 iter 70 value 81.274022 iter 80 value 81.145392 iter 90 value 81.110913 iter 100 value 80.905651 final value 80.905651 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.325081 iter 10 value 94.254499 iter 20 value 85.083706 iter 30 value 84.596275 iter 40 value 83.873882 iter 50 value 81.944717 iter 60 value 81.664275 iter 70 value 81.031941 iter 80 value 80.632069 iter 90 value 80.364592 iter 100 value 80.242955 final value 80.242955 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.701579 iter 10 value 96.353665 iter 20 value 87.137130 iter 30 value 84.591653 iter 40 value 84.194205 iter 50 value 84.176876 iter 60 value 84.140899 iter 70 value 84.045360 iter 80 value 84.007717 iter 90 value 83.969764 iter 100 value 83.868679 final value 83.868679 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 128.774934 iter 10 value 94.726328 iter 20 value 94.052243 iter 30 value 86.893034 iter 40 value 85.598835 iter 50 value 84.245968 iter 60 value 81.984784 iter 70 value 80.710677 iter 80 value 80.547600 iter 90 value 79.871918 iter 100 value 79.763033 final value 79.763033 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.915120 final value 94.485989 converged Fitting Repeat 2 # weights: 103 initial value 95.528989 final value 94.485725 converged Fitting Repeat 3 # weights: 103 initial value 96.512913 final value 94.486006 converged Fitting Repeat 4 # weights: 103 initial value 99.341765 final value 94.468257 converged Fitting Repeat 5 # weights: 103 initial value 101.113180 iter 10 value 94.468605 iter 20 value 92.023168 final value 87.334502 converged Fitting Repeat 1 # weights: 305 initial value 104.687563 iter 10 value 94.489113 iter 20 value 94.484360 iter 30 value 89.271917 iter 40 value 82.904401 iter 50 value 81.862037 iter 60 value 81.679351 iter 70 value 81.668228 iter 80 value 81.668116 final value 81.668096 converged Fitting Repeat 2 # weights: 305 initial value 101.764507 iter 10 value 94.489300 iter 20 value 92.287714 iter 30 value 85.790013 iter 40 value 84.029341 iter 50 value 82.263172 iter 60 value 81.337653 iter 70 value 81.304205 iter 80 value 81.303300 iter 90 value 81.169008 iter 100 value 81.032758 final value 81.032758 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 96.622207 iter 10 value 94.446302 iter 20 value 94.442608 iter 30 value 88.510735 iter 40 value 85.313706 iter 50 value 85.313269 iter 60 value 85.312504 iter 70 value 84.693695 iter 80 value 83.461055 iter 90 value 81.858914 iter 100 value 79.283630 final value 79.283630 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 125.755268 iter 10 value 94.472103 iter 20 value 93.752918 iter 30 value 85.532221 iter 40 value 85.519900 iter 50 value 84.881557 iter 60 value 84.214248 iter 70 value 84.210476 iter 80 value 84.208894 iter 90 value 84.206964 final value 84.206474 converged Fitting Repeat 5 # weights: 305 initial value 98.844894 iter 10 value 94.425553 iter 20 value 94.304298 iter 30 value 94.212345 iter 40 value 92.744453 iter 50 value 91.080235 iter 60 value 90.659659 iter 70 value 90.657343 iter 80 value 89.939804 iter 80 value 89.939803 iter 80 value 89.939803 final value 89.939803 converged Fitting Repeat 1 # weights: 507 initial value 97.003460 iter 10 value 94.319849 iter 20 value 94.310589 iter 30 value 92.635060 iter 40 value 92.421799 iter 50 value 92.421760 final value 92.421754 converged Fitting Repeat 2 # weights: 507 initial value 103.495666 iter 10 value 93.438919 iter 20 value 93.433563 iter 30 value 93.425685 iter 40 value 93.087183 iter 50 value 90.905798 iter 60 value 85.619977 iter 70 value 84.330584 final value 84.328004 converged Fitting Repeat 3 # weights: 507 initial value 99.587430 iter 10 value 94.492488 iter 20 value 94.455565 iter 30 value 87.113632 iter 40 value 84.133396 iter 50 value 84.050186 final value 84.049925 converged Fitting Repeat 4 # weights: 507 initial value 98.648467 iter 10 value 94.474840 iter 20 value 94.318417 iter 30 value 93.426583 iter 40 value 93.423871 final value 93.423845 converged Fitting Repeat 5 # weights: 507 initial value 107.764173 iter 10 value 92.189380 iter 20 value 90.797342 iter 30 value 90.790083 iter 40 value 84.245106 iter 50 value 84.183041 iter 60 value 83.877987 iter 70 value 82.266922 iter 80 value 81.440694 iter 90 value 81.011018 iter 100 value 80.826494 final value 80.826494 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.106648 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 95.565641 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 99.948769 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 108.333480 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.820642 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 92.812273 iter 10 value 89.579997 final value 89.579595 converged Fitting Repeat 2 # weights: 305 initial value 94.866612 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 94.184231 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 102.096940 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 102.166627 iter 10 value 93.808227 iter 20 value 93.778232 final value 93.778228 converged Fitting Repeat 1 # weights: 507 initial value 102.725342 iter 10 value 86.297073 iter 20 value 85.837464 final value 85.837406 converged Fitting Repeat 2 # weights: 507 initial value 106.284486 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 106.334034 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 94.185753 iter 10 value 84.536920 iter 20 value 84.116833 iter 30 value 83.890407 iter 40 value 83.514423 iter 40 value 83.514423 final value 83.514423 converged Fitting Repeat 5 # weights: 507 initial value 113.241637 final value 94.032967 converged Fitting Repeat 1 # weights: 103 initial value 112.475268 iter 10 value 97.511738 iter 20 value 94.056775 iter 30 value 94.018784 iter 40 value 93.127233 iter 50 value 93.062809 iter 60 value 90.527731 iter 70 value 87.502705 iter 80 value 87.201244 iter 90 value 86.467351 iter 100 value 85.144678 final value 85.144678 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 104.053408 iter 10 value 93.985922 iter 20 value 85.827725 iter 30 value 84.423869 iter 40 value 84.402334 iter 50 value 84.306792 iter 60 value 84.191624 final value 84.183500 converged Fitting Repeat 3 # weights: 103 initial value 100.482012 iter 10 value 94.065597 iter 20 value 94.054358 iter 30 value 93.363295 iter 40 value 92.203587 iter 50 value 88.173827 iter 60 value 87.574599 iter 70 value 85.907867 iter 80 value 84.917086 iter 90 value 84.755265 iter 100 value 84.176099 final value 84.176099 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 95.697214 iter 10 value 94.063710 iter 20 value 94.000797 iter 30 value 93.298249 iter 40 value 93.192955 iter 50 value 92.298899 iter 60 value 85.988951 iter 70 value 84.739090 iter 80 value 83.764725 iter 90 value 83.372199 iter 100 value 82.947387 final value 82.947387 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 110.638061 iter 10 value 93.903389 iter 20 value 91.346537 iter 30 value 86.788847 iter 40 value 84.587166 iter 50 value 84.521845 iter 60 value 84.128688 iter 70 value 84.052344 iter 80 value 83.935258 iter 90 value 83.921228 iter 90 value 83.921228 iter 90 value 83.921228 final value 83.921228 converged Fitting Repeat 1 # weights: 305 initial value 103.130600 iter 10 value 93.848931 iter 20 value 89.953649 iter 30 value 86.034083 iter 40 value 83.997491 iter 50 value 83.481014 iter 60 value 83.089913 iter 70 value 82.980337 iter 80 value 82.841821 iter 90 value 82.536097 iter 100 value 82.183555 final value 82.183555 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.495063 iter 10 value 94.069207 iter 20 value 91.493250 iter 30 value 89.041355 iter 40 value 88.465360 iter 50 value 87.311547 iter 60 value 84.916133 iter 70 value 83.995782 iter 80 value 83.587048 iter 90 value 82.409291 iter 100 value 82.053943 final value 82.053943 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.684236 iter 10 value 90.993211 iter 20 value 88.609214 iter 30 value 84.836820 iter 40 value 84.416370 iter 50 value 83.192755 iter 60 value 82.449785 iter 70 value 82.309919 iter 80 value 82.254828 iter 90 value 82.208954 iter 100 value 82.201984 final value 82.201984 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.835766 iter 10 value 94.038019 iter 20 value 92.984839 iter 30 value 88.998799 iter 40 value 88.540246 iter 50 value 85.914964 iter 60 value 83.142799 iter 70 value 82.266685 iter 80 value 82.026826 iter 90 value 81.770424 iter 100 value 81.641724 final value 81.641724 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 112.171854 iter 10 value 94.064788 iter 20 value 93.547213 iter 30 value 92.704145 iter 40 value 89.724431 iter 50 value 86.820864 iter 60 value 85.826932 iter 70 value 85.317975 iter 80 value 84.046439 iter 90 value 83.663726 iter 100 value 82.546642 final value 82.546642 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 122.033258 iter 10 value 98.952158 iter 20 value 86.274135 iter 30 value 85.146753 iter 40 value 84.513501 iter 50 value 83.809137 iter 60 value 82.517155 iter 70 value 82.032232 iter 80 value 81.973026 iter 90 value 81.805338 iter 100 value 81.743594 final value 81.743594 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 112.197756 iter 10 value 94.200034 iter 20 value 93.271787 iter 30 value 89.058716 iter 40 value 87.915351 iter 50 value 85.772708 iter 60 value 84.634812 iter 70 value 83.559688 iter 80 value 82.671330 iter 90 value 82.195481 iter 100 value 81.814210 final value 81.814210 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.720228 iter 10 value 96.050526 iter 20 value 92.550934 iter 30 value 92.109334 iter 40 value 90.704770 iter 50 value 88.851974 iter 60 value 85.136498 iter 70 value 84.538779 iter 80 value 84.351593 iter 90 value 84.278659 iter 100 value 83.920401 final value 83.920401 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.223223 iter 10 value 94.504139 iter 20 value 93.799587 iter 30 value 88.350075 iter 40 value 87.026368 iter 50 value 84.482391 iter 60 value 84.133133 iter 70 value 83.894468 iter 80 value 83.120901 iter 90 value 82.617666 iter 100 value 82.256368 final value 82.256368 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.375870 iter 10 value 94.067498 iter 20 value 93.841563 iter 30 value 93.762589 iter 40 value 91.781826 iter 50 value 84.816495 iter 60 value 84.039274 iter 70 value 83.370784 iter 80 value 83.069471 iter 90 value 82.976724 iter 100 value 82.947351 final value 82.947351 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.597403 final value 94.054581 converged Fitting Repeat 2 # weights: 103 initial value 96.567841 final value 94.054470 converged Fitting Repeat 3 # weights: 103 initial value 98.989799 final value 93.373652 converged Fitting Repeat 4 # weights: 103 initial value 96.914733 iter 10 value 94.054794 iter 20 value 93.619902 iter 30 value 93.193065 final value 93.192707 converged Fitting Repeat 5 # weights: 103 initial value 107.419994 final value 94.054518 converged Fitting Repeat 1 # weights: 305 initial value 95.084813 iter 10 value 94.037735 iter 20 value 93.519600 iter 30 value 93.083394 iter 40 value 87.205293 iter 50 value 86.206352 iter 60 value 86.167166 iter 70 value 86.146796 iter 80 value 86.142753 iter 90 value 86.142658 iter 100 value 86.142548 final value 86.142548 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 94.084977 iter 10 value 94.056837 iter 20 value 93.764484 final value 93.666805 converged Fitting Repeat 3 # weights: 305 initial value 128.220853 iter 10 value 94.057589 iter 20 value 91.585825 iter 30 value 88.002692 iter 40 value 86.869644 iter 50 value 86.378742 iter 60 value 85.746436 iter 70 value 83.863159 iter 80 value 83.637744 iter 90 value 83.635451 iter 100 value 83.366718 final value 83.366718 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.603403 iter 10 value 94.057734 iter 20 value 94.030207 iter 30 value 93.192793 final value 93.192705 converged Fitting Repeat 5 # weights: 305 initial value 112.462250 iter 10 value 93.376693 iter 20 value 93.372257 iter 30 value 86.700105 final value 85.978067 converged Fitting Repeat 1 # weights: 507 initial value 108.427878 iter 10 value 94.042328 iter 20 value 93.978243 iter 30 value 93.379967 iter 40 value 91.690395 iter 50 value 85.180736 iter 60 value 83.928812 iter 70 value 83.922413 iter 80 value 83.829976 iter 90 value 83.007102 iter 100 value 82.912948 final value 82.912948 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 115.967724 iter 10 value 94.041895 iter 20 value 93.725678 iter 30 value 92.882334 iter 40 value 92.882080 final value 92.881844 converged Fitting Repeat 3 # weights: 507 initial value 109.851562 iter 10 value 94.061131 iter 20 value 93.368830 iter 30 value 93.040627 final value 93.040405 converged Fitting Repeat 4 # weights: 507 initial value 108.464635 iter 10 value 94.061444 iter 20 value 94.052531 iter 30 value 93.214832 iter 40 value 93.056950 iter 50 value 87.420438 iter 60 value 85.828445 iter 70 value 85.094659 iter 80 value 83.135442 iter 90 value 83.060806 iter 100 value 83.046122 final value 83.046122 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.523023 iter 10 value 93.729130 iter 20 value 93.381202 iter 30 value 87.993087 iter 40 value 86.644098 iter 50 value 86.642619 iter 60 value 86.297987 iter 70 value 86.103377 iter 80 value 86.102189 iter 90 value 86.101726 final value 86.101272 converged Fitting Repeat 1 # weights: 103 initial value 98.169848 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 102.137868 iter 10 value 93.394929 iter 10 value 93.394928 iter 10 value 93.394928 final value 93.394928 converged Fitting Repeat 3 # weights: 103 initial value 95.257338 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 94.614192 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 94.616834 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 100.871668 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 111.414062 iter 10 value 86.897811 final value 86.053792 converged Fitting Repeat 3 # weights: 305 initial value 112.399077 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.580242 iter 10 value 88.291155 iter 20 value 85.335863 iter 30 value 84.820533 iter 40 value 84.473767 iter 50 value 84.473719 final value 84.473716 converged Fitting Repeat 5 # weights: 305 initial value 104.869921 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 103.887583 iter 10 value 93.396347 iter 20 value 93.394942 final value 93.394928 converged Fitting Repeat 2 # weights: 507 initial value 105.521198 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 113.099015 final value 94.114232 converged Fitting Repeat 4 # weights: 507 initial value 113.385126 final value 94.473118 converged Fitting Repeat 5 # weights: 507 initial value 106.060662 iter 10 value 93.081436 final value 93.081395 converged Fitting Repeat 1 # weights: 103 initial value 98.716944 iter 10 value 94.488754 iter 20 value 92.491110 iter 30 value 91.863888 iter 40 value 89.524171 iter 50 value 86.240018 iter 60 value 85.264233 iter 70 value 84.256235 iter 80 value 83.274873 iter 90 value 82.788369 iter 100 value 82.065238 final value 82.065238 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 101.818951 iter 10 value 94.241336 iter 20 value 92.055622 iter 30 value 91.924721 iter 40 value 90.689563 iter 50 value 85.654551 iter 60 value 83.999898 iter 70 value 82.882196 iter 80 value 82.047797 iter 90 value 82.008159 final value 82.008097 converged Fitting Repeat 3 # weights: 103 initial value 114.989487 iter 10 value 94.416956 iter 20 value 88.014044 iter 30 value 87.841466 iter 40 value 87.628521 iter 50 value 87.237569 iter 60 value 87.135370 iter 70 value 85.307845 iter 80 value 83.253516 iter 90 value 82.429077 iter 100 value 81.416187 final value 81.416187 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 107.483272 iter 10 value 93.686929 iter 20 value 91.705477 iter 30 value 85.073489 iter 40 value 84.603532 iter 50 value 83.507561 iter 60 value 82.623672 iter 70 value 81.655313 final value 81.652366 converged Fitting Repeat 5 # weights: 103 initial value 104.128610 iter 10 value 93.528974 iter 20 value 86.990822 iter 30 value 86.140813 iter 40 value 85.417339 iter 50 value 85.028917 iter 60 value 83.920018 iter 70 value 83.280631 iter 80 value 83.243460 final value 83.243444 converged Fitting Repeat 1 # weights: 305 initial value 100.563595 iter 10 value 94.415963 iter 20 value 90.201186 iter 30 value 87.949496 iter 40 value 83.890725 iter 50 value 81.671677 iter 60 value 81.302810 iter 70 value 80.895245 iter 80 value 79.987164 iter 90 value 79.701435 iter 100 value 79.690059 final value 79.690059 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.813308 iter 10 value 94.392278 iter 20 value 85.865250 iter 30 value 84.905726 iter 40 value 84.209298 iter 50 value 83.781295 iter 60 value 83.198786 iter 70 value 80.423680 iter 80 value 79.853531 iter 90 value 79.635225 iter 100 value 79.608169 final value 79.608169 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.613513 iter 10 value 92.280839 iter 20 value 88.462168 iter 30 value 84.931632 iter 40 value 83.477136 iter 50 value 81.431794 iter 60 value 81.135847 iter 70 value 80.871884 iter 80 value 80.740675 iter 90 value 80.728746 iter 100 value 80.711952 final value 80.711952 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.434351 iter 10 value 94.237418 iter 20 value 93.286541 iter 30 value 87.754295 iter 40 value 85.444722 iter 50 value 82.666741 iter 60 value 81.105309 iter 70 value 80.410053 iter 80 value 80.270104 iter 90 value 79.906188 iter 100 value 79.780409 final value 79.780409 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.000052 iter 10 value 94.296108 iter 20 value 93.676024 iter 30 value 86.349264 iter 40 value 84.069360 iter 50 value 83.499359 iter 60 value 83.307800 iter 70 value 83.172801 iter 80 value 81.298781 iter 90 value 80.154181 iter 100 value 79.797767 final value 79.797767 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 148.083642 iter 10 value 96.778521 iter 20 value 88.351516 iter 30 value 86.568123 iter 40 value 84.055421 iter 50 value 83.649832 iter 60 value 83.456581 iter 70 value 83.379759 iter 80 value 83.154136 iter 90 value 82.308826 iter 100 value 82.162348 final value 82.162348 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 132.015127 iter 10 value 94.502528 iter 20 value 92.922002 iter 30 value 83.463723 iter 40 value 81.700555 iter 50 value 81.141933 iter 60 value 81.104212 iter 70 value 79.943257 iter 80 value 79.672112 iter 90 value 79.401801 iter 100 value 79.279861 final value 79.279861 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.843630 iter 10 value 92.119286 iter 20 value 88.577974 iter 30 value 86.052678 iter 40 value 84.999820 iter 50 value 84.624125 iter 60 value 84.126092 iter 70 value 83.324840 iter 80 value 82.914241 iter 90 value 82.872160 iter 100 value 82.526881 final value 82.526881 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 129.004632 iter 10 value 97.021370 iter 20 value 93.139767 iter 30 value 88.232867 iter 40 value 86.719503 iter 50 value 84.625623 iter 60 value 83.529944 iter 70 value 83.108277 iter 80 value 81.287530 iter 90 value 80.596094 iter 100 value 80.334687 final value 80.334687 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.853423 iter 10 value 94.092926 iter 20 value 89.989893 iter 30 value 85.298539 iter 40 value 82.907779 iter 50 value 82.048754 iter 60 value 81.357668 iter 70 value 80.725733 iter 80 value 79.877248 iter 90 value 79.610801 iter 100 value 79.520123 final value 79.520123 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.080285 iter 10 value 93.397670 iter 20 value 93.397138 iter 30 value 93.396394 final value 93.395899 converged Fitting Repeat 2 # weights: 103 initial value 95.711918 final value 94.485856 converged Fitting Repeat 3 # weights: 103 initial value 95.749240 final value 94.485732 converged Fitting Repeat 4 # weights: 103 initial value 97.412659 iter 10 value 94.486059 iter 20 value 94.484216 iter 20 value 94.484216 iter 20 value 94.484216 final value 94.484216 converged Fitting Repeat 5 # weights: 103 initial value 94.534770 iter 10 value 94.116020 iter 20 value 93.176863 iter 30 value 93.084286 iter 40 value 93.080991 final value 93.080977 converged Fitting Repeat 1 # weights: 305 initial value 95.248817 iter 10 value 94.350810 final value 94.331057 converged Fitting Repeat 2 # weights: 305 initial value 122.854710 iter 10 value 94.489304 iter 20 value 94.484499 iter 30 value 94.310890 iter 40 value 93.787749 iter 50 value 87.362327 iter 60 value 87.361056 iter 70 value 87.353210 iter 80 value 83.108940 iter 90 value 82.384747 iter 100 value 82.379643 final value 82.379643 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 98.257046 iter 10 value 94.151919 iter 20 value 89.681869 iter 30 value 84.453417 iter 40 value 84.016915 iter 50 value 83.934247 iter 60 value 83.933893 iter 70 value 83.844726 iter 80 value 83.781888 iter 90 value 83.282012 iter 100 value 82.616233 final value 82.616233 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 94.458582 iter 10 value 87.742468 iter 20 value 84.909943 iter 30 value 84.252740 iter 40 value 84.251909 iter 50 value 84.247928 iter 60 value 83.900804 iter 70 value 82.917791 iter 80 value 81.744741 iter 90 value 81.117219 iter 100 value 80.874084 final value 80.874084 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 97.755764 iter 10 value 94.488412 iter 20 value 94.466094 iter 30 value 93.395767 iter 30 value 93.395767 iter 30 value 93.395767 final value 93.395767 converged Fitting Repeat 1 # weights: 507 initial value 100.863659 iter 10 value 94.491810 iter 20 value 94.428874 iter 30 value 85.013227 iter 40 value 83.917462 iter 50 value 83.574694 iter 60 value 83.497210 iter 70 value 83.483655 iter 80 value 83.394161 iter 90 value 82.292194 iter 100 value 82.175106 final value 82.175106 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 95.699563 iter 10 value 94.481575 iter 20 value 87.643996 iter 30 value 86.731825 iter 40 value 86.730571 iter 50 value 86.215505 iter 60 value 84.252609 iter 70 value 83.613188 iter 80 value 83.543246 iter 90 value 83.533640 iter 100 value 83.532893 final value 83.532893 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 98.367579 iter 10 value 94.492560 iter 20 value 94.474230 iter 30 value 93.097470 iter 40 value 93.077823 iter 50 value 92.987679 iter 60 value 92.973596 final value 92.973567 converged Fitting Repeat 4 # weights: 507 initial value 101.252764 iter 10 value 94.492476 iter 20 value 91.422072 iter 30 value 88.722367 iter 40 value 88.220571 iter 50 value 87.318114 iter 60 value 87.309746 iter 70 value 87.309682 iter 80 value 87.309254 iter 90 value 85.298034 iter 100 value 85.029841 final value 85.029841 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.740776 iter 10 value 94.491502 iter 20 value 92.071421 iter 30 value 85.721966 iter 40 value 85.671418 iter 50 value 85.669534 iter 60 value 84.269862 iter 70 value 83.336324 iter 80 value 79.854010 iter 90 value 78.339960 iter 100 value 78.072614 final value 78.072614 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.381919 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 94.778342 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 103.809795 final value 94.467391 converged Fitting Repeat 4 # weights: 103 initial value 99.026201 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 94.531343 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 112.036538 final value 94.467391 converged Fitting Repeat 2 # weights: 305 initial value 112.009296 final value 94.467391 converged Fitting Repeat 3 # weights: 305 initial value 102.092304 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 95.651044 final value 93.079545 converged Fitting Repeat 5 # weights: 305 initial value 96.532364 iter 10 value 93.111074 final value 93.109890 converged Fitting Repeat 1 # weights: 507 initial value 105.204007 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 124.989937 iter 10 value 94.504537 final value 94.455556 converged Fitting Repeat 3 # weights: 507 initial value 139.503387 iter 10 value 94.585919 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 117.319964 final value 94.467391 converged Fitting Repeat 5 # weights: 507 initial value 118.487016 iter 10 value 94.437038 final value 94.436782 converged Fitting Repeat 1 # weights: 103 initial value 107.251395 iter 10 value 94.556234 iter 20 value 94.477868 iter 30 value 94.476597 iter 40 value 94.048990 iter 50 value 87.505439 iter 60 value 82.763856 iter 70 value 81.978983 iter 80 value 81.543051 iter 90 value 81.322316 iter 100 value 81.256700 final value 81.256700 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.780546 iter 10 value 94.477630 iter 20 value 93.969980 iter 30 value 92.961340 iter 40 value 87.079180 iter 50 value 85.767971 iter 60 value 82.666847 iter 70 value 82.293666 iter 80 value 81.616233 iter 90 value 81.411526 final value 81.410259 converged Fitting Repeat 3 # weights: 103 initial value 96.830887 iter 10 value 94.248424 iter 20 value 86.915336 iter 30 value 85.096874 iter 40 value 83.733121 iter 50 value 81.976164 iter 60 value 81.428267 iter 70 value 81.410270 final value 81.410259 converged Fitting Repeat 4 # weights: 103 initial value 104.225878 iter 10 value 89.382771 iter 20 value 84.829620 iter 30 value 83.742134 iter 40 value 83.352186 iter 50 value 83.322070 iter 60 value 83.216211 iter 70 value 83.178212 final value 83.178136 converged Fitting Repeat 5 # weights: 103 initial value 102.192549 iter 10 value 94.488438 iter 20 value 94.437686 iter 30 value 86.900526 iter 40 value 86.356322 iter 50 value 86.200574 iter 60 value 86.071362 iter 70 value 86.062081 iter 80 value 84.977637 iter 90 value 83.958779 iter 100 value 83.851239 final value 83.851239 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.276296 iter 10 value 89.587403 iter 20 value 82.901215 iter 30 value 82.330492 iter 40 value 81.200650 iter 50 value 80.843951 iter 60 value 80.419118 iter 70 value 80.074523 iter 80 value 79.372904 iter 90 value 78.189416 iter 100 value 78.057028 final value 78.057028 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 120.643409 iter 10 value 95.103917 iter 20 value 94.477855 iter 30 value 86.371813 iter 40 value 86.199799 iter 50 value 86.064083 iter 60 value 81.762418 iter 70 value 81.049017 iter 80 value 79.594926 iter 90 value 78.883992 iter 100 value 78.700426 final value 78.700426 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.765464 iter 10 value 94.383730 iter 20 value 84.757487 iter 30 value 83.837386 iter 40 value 83.579043 iter 50 value 80.685856 iter 60 value 80.221928 iter 70 value 79.795769 iter 80 value 78.963388 iter 90 value 78.490224 iter 100 value 78.310787 final value 78.310787 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.878713 iter 10 value 94.444146 iter 20 value 87.318439 iter 30 value 84.933041 iter 40 value 84.061113 iter 50 value 83.521580 iter 60 value 82.225764 iter 70 value 79.079249 iter 80 value 78.810901 iter 90 value 78.454311 iter 100 value 78.346256 final value 78.346256 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 119.265748 iter 10 value 94.531953 iter 20 value 91.801986 iter 30 value 90.551744 iter 40 value 82.829816 iter 50 value 82.122877 iter 60 value 81.723742 iter 70 value 81.574012 iter 80 value 81.419160 iter 90 value 81.079826 iter 100 value 80.977809 final value 80.977809 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.299973 iter 10 value 94.720386 iter 20 value 93.653463 iter 30 value 87.328255 iter 40 value 86.410661 iter 50 value 85.755662 iter 60 value 81.711178 iter 70 value 79.840234 iter 80 value 79.324073 iter 90 value 78.633623 iter 100 value 78.184157 final value 78.184157 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 104.781953 iter 10 value 96.359723 iter 20 value 84.552083 iter 30 value 82.333385 iter 40 value 82.105176 iter 50 value 81.389542 iter 60 value 81.196451 iter 70 value 80.984823 iter 80 value 78.815433 iter 90 value 78.373405 iter 100 value 78.026094 final value 78.026094 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 118.822758 iter 10 value 95.238369 iter 20 value 92.852412 iter 30 value 91.134066 iter 40 value 91.061150 iter 50 value 88.802210 iter 60 value 81.458014 iter 70 value 81.067664 iter 80 value 80.851039 iter 90 value 80.547878 iter 100 value 79.619486 final value 79.619486 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.368247 iter 10 value 94.271720 iter 20 value 90.965192 iter 30 value 85.676594 iter 40 value 83.331964 iter 50 value 80.158170 iter 60 value 79.323723 iter 70 value 79.147080 iter 80 value 79.134023 iter 90 value 79.086690 iter 100 value 78.671369 final value 78.671369 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.612388 iter 10 value 94.978412 iter 20 value 93.257864 iter 30 value 84.703690 iter 40 value 83.409651 iter 50 value 80.965447 iter 60 value 80.079551 iter 70 value 79.346599 iter 80 value 79.142091 iter 90 value 78.677435 iter 100 value 78.580374 final value 78.580374 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.022525 final value 94.485961 converged Fitting Repeat 2 # weights: 103 initial value 96.475951 final value 94.485937 converged Fitting Repeat 3 # weights: 103 initial value 99.304355 final value 94.485862 converged Fitting Repeat 4 # weights: 103 initial value 107.376570 iter 10 value 94.486088 iter 20 value 94.383097 iter 30 value 86.962021 iter 40 value 86.955541 iter 50 value 86.955208 final value 86.955058 converged Fitting Repeat 5 # weights: 103 initial value 101.084206 final value 94.485902 converged Fitting Repeat 1 # weights: 305 initial value 98.295025 iter 10 value 94.489391 iter 20 value 94.484334 iter 30 value 89.187193 iter 40 value 83.324813 iter 50 value 82.359727 iter 60 value 82.029059 iter 70 value 82.027582 iter 80 value 82.011921 iter 90 value 81.819062 iter 100 value 81.610088 final value 81.610088 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 109.873538 iter 10 value 94.489144 iter 20 value 94.480782 iter 30 value 93.923578 iter 40 value 83.370926 iter 50 value 83.266005 final value 83.257749 converged Fitting Repeat 3 # weights: 305 initial value 98.598877 iter 10 value 94.472518 iter 20 value 94.467529 iter 30 value 90.231988 final value 89.897817 converged Fitting Repeat 4 # weights: 305 initial value 100.124092 iter 10 value 91.167230 iter 20 value 90.999891 iter 30 value 90.999122 iter 40 value 90.997354 final value 90.996999 converged Fitting Repeat 5 # weights: 305 initial value 117.675437 iter 10 value 91.044466 iter 20 value 91.033970 iter 30 value 91.032047 iter 40 value 91.029337 iter 50 value 91.028295 iter 60 value 90.840045 iter 70 value 89.450991 iter 80 value 89.438265 iter 90 value 89.437893 final value 89.437794 converged Fitting Repeat 1 # weights: 507 initial value 98.017158 iter 10 value 94.475709 iter 20 value 88.210303 iter 30 value 86.370173 final value 86.370041 converged Fitting Repeat 2 # weights: 507 initial value 104.866367 iter 10 value 94.492349 iter 20 value 94.406989 iter 30 value 84.263700 iter 40 value 83.849521 iter 50 value 83.583763 iter 60 value 80.399941 iter 70 value 80.138120 iter 80 value 80.096782 iter 90 value 79.934320 final value 79.928334 converged Fitting Repeat 3 # weights: 507 initial value 96.482956 iter 10 value 94.491350 iter 20 value 94.462087 iter 30 value 92.387091 iter 40 value 88.390371 iter 50 value 88.384877 iter 60 value 88.383990 iter 70 value 87.290396 iter 80 value 87.282928 iter 90 value 87.281335 iter 100 value 87.281017 final value 87.281017 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.800779 iter 10 value 94.492293 iter 20 value 94.439240 iter 30 value 87.542809 iter 40 value 87.406260 iter 50 value 85.963608 iter 60 value 85.963395 iter 70 value 85.043926 iter 80 value 83.187847 iter 90 value 82.367751 iter 100 value 81.979781 final value 81.979781 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 96.149145 iter 10 value 94.491860 iter 20 value 94.477106 iter 30 value 92.289706 iter 40 value 82.741106 iter 50 value 81.905335 iter 60 value 81.892088 iter 70 value 81.891741 iter 80 value 81.841292 iter 90 value 81.826866 final value 81.826741 converged Fitting Repeat 1 # weights: 103 initial value 96.588521 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 98.552146 final value 93.356725 converged Fitting Repeat 3 # weights: 103 initial value 99.351779 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.829074 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.275190 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 96.445297 iter 10 value 90.194469 iter 20 value 88.157418 iter 30 value 86.994684 iter 40 value 86.470727 iter 50 value 86.298122 final value 86.297847 converged Fitting Repeat 2 # weights: 305 initial value 96.914928 iter 10 value 93.086920 final value 93.086891 converged Fitting Repeat 3 # weights: 305 initial value 107.753233 iter 10 value 93.656850 iter 20 value 93.307911 iter 30 value 93.305807 iter 30 value 93.305806 iter 30 value 93.305806 final value 93.305806 converged Fitting Repeat 4 # weights: 305 initial value 91.853000 iter 10 value 84.159480 iter 20 value 84.157880 iter 20 value 84.157880 final value 84.157880 converged Fitting Repeat 5 # weights: 305 initial value 95.272893 iter 10 value 93.183870 final value 93.183866 converged Fitting Repeat 1 # weights: 507 initial value 105.773042 iter 10 value 93.525212 final value 93.523811 converged Fitting Repeat 2 # weights: 507 initial value 95.943182 iter 10 value 87.668057 iter 20 value 85.684112 final value 85.651213 converged Fitting Repeat 3 # weights: 507 initial value 100.371122 iter 10 value 93.173409 final value 93.173405 converged Fitting Repeat 4 # weights: 507 initial value 101.625723 final value 93.551913 converged Fitting Repeat 5 # weights: 507 initial value 94.957623 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 97.027750 iter 10 value 94.055382 iter 20 value 93.708572 iter 30 value 92.794637 iter 40 value 83.612738 iter 50 value 82.323598 iter 60 value 81.773552 iter 70 value 81.399254 iter 80 value 79.583914 iter 90 value 79.159418 iter 100 value 79.029549 final value 79.029549 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 114.649193 iter 10 value 94.055578 iter 20 value 93.985163 iter 30 value 93.889021 iter 40 value 92.893077 iter 50 value 92.823798 iter 60 value 92.804401 iter 70 value 91.227017 iter 80 value 82.261834 iter 90 value 80.391313 iter 100 value 80.105530 final value 80.105530 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.017504 iter 10 value 93.856014 iter 20 value 87.265369 iter 30 value 85.498462 iter 40 value 85.302114 iter 50 value 84.797788 iter 60 value 84.677418 iter 70 value 80.152144 iter 80 value 79.732327 iter 90 value 79.287411 iter 100 value 78.948052 final value 78.948052 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 102.328455 iter 10 value 94.421743 iter 20 value 92.196412 iter 30 value 86.357497 iter 40 value 84.848585 iter 50 value 83.541443 iter 60 value 83.299274 iter 70 value 82.979594 iter 80 value 80.387328 iter 90 value 80.180109 iter 100 value 79.299084 final value 79.299084 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 98.466159 iter 10 value 94.139113 iter 20 value 94.055616 iter 30 value 92.925211 iter 40 value 92.811354 iter 50 value 88.533611 iter 60 value 83.516560 iter 70 value 83.273102 iter 80 value 82.809128 iter 90 value 79.580704 iter 100 value 78.977286 final value 78.977286 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 106.959045 iter 10 value 94.140490 iter 20 value 92.849646 iter 30 value 92.743444 iter 40 value 92.318801 iter 50 value 84.579354 iter 60 value 83.150942 iter 70 value 82.810520 iter 80 value 82.104498 iter 90 value 81.810015 iter 100 value 81.684231 final value 81.684231 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 106.005693 iter 10 value 93.035509 iter 20 value 92.666738 iter 30 value 89.709649 iter 40 value 86.574349 iter 50 value 84.116079 iter 60 value 83.533231 iter 70 value 83.122580 iter 80 value 82.475899 iter 90 value 80.208498 iter 100 value 79.011434 final value 79.011434 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 111.773891 iter 10 value 93.917420 iter 20 value 84.664225 iter 30 value 83.932663 iter 40 value 82.649046 iter 50 value 81.759098 iter 60 value 80.240102 iter 70 value 79.408872 iter 80 value 79.303448 iter 90 value 79.201837 iter 100 value 78.970265 final value 78.970265 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.384159 iter 10 value 93.720693 iter 20 value 91.355151 iter 30 value 83.068691 iter 40 value 82.035981 iter 50 value 80.524623 iter 60 value 80.379267 iter 70 value 78.874642 iter 80 value 78.031028 iter 90 value 77.869516 iter 100 value 77.849980 final value 77.849980 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 109.325092 iter 10 value 94.065474 iter 20 value 93.234966 iter 30 value 92.845353 iter 40 value 90.349893 iter 50 value 83.620226 iter 60 value 82.099922 iter 70 value 79.680920 iter 80 value 79.095615 iter 90 value 78.713790 iter 100 value 78.487161 final value 78.487161 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.799840 iter 10 value 94.903277 iter 20 value 93.477577 iter 30 value 92.103376 iter 40 value 86.623563 iter 50 value 84.917034 iter 60 value 82.924763 iter 70 value 82.290706 iter 80 value 81.526839 iter 90 value 81.316503 iter 100 value 80.601474 final value 80.601474 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 118.637257 iter 10 value 95.460497 iter 20 value 93.832542 iter 30 value 87.910418 iter 40 value 86.303041 iter 50 value 82.359986 iter 60 value 80.865492 iter 70 value 79.762969 iter 80 value 78.503977 iter 90 value 77.744276 iter 100 value 77.219151 final value 77.219151 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.349019 iter 10 value 92.292562 iter 20 value 85.506360 iter 30 value 85.289359 iter 40 value 83.086606 iter 50 value 82.361892 iter 60 value 81.608051 iter 70 value 81.209885 iter 80 value 79.096369 iter 90 value 78.437325 iter 100 value 78.202899 final value 78.202899 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.490614 iter 10 value 96.318779 iter 20 value 90.563378 iter 30 value 86.620459 iter 40 value 86.394850 iter 50 value 85.305975 iter 60 value 80.133328 iter 70 value 79.434514 iter 80 value 78.094692 iter 90 value 77.642229 iter 100 value 77.430274 final value 77.430274 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 115.925057 iter 10 value 97.134112 iter 20 value 83.065012 iter 30 value 82.167494 iter 40 value 79.928888 iter 50 value 79.303176 iter 60 value 78.084357 iter 70 value 77.424816 iter 80 value 77.248418 iter 90 value 77.165468 iter 100 value 77.070032 final value 77.070032 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.391020 final value 94.054349 converged Fitting Repeat 2 # weights: 103 initial value 94.831853 final value 94.054497 converged Fitting Repeat 3 # weights: 103 initial value 98.217804 final value 94.054478 converged Fitting Repeat 4 # weights: 103 initial value 95.784390 iter 10 value 93.837798 iter 20 value 93.836438 iter 30 value 92.691463 iter 40 value 92.691325 final value 92.691318 converged Fitting Repeat 5 # weights: 103 initial value 98.167207 final value 94.054559 converged Fitting Repeat 1 # weights: 305 initial value 95.673920 iter 10 value 94.057292 iter 20 value 93.280781 iter 30 value 83.974165 iter 40 value 83.516558 iter 50 value 82.516988 iter 60 value 82.045417 final value 82.045407 converged Fitting Repeat 2 # weights: 305 initial value 94.613356 iter 10 value 94.057563 iter 20 value 94.051909 iter 30 value 93.357180 final value 93.357178 converged Fitting Repeat 3 # weights: 305 initial value 111.774114 iter 10 value 93.879129 iter 20 value 93.841343 iter 30 value 93.836426 final value 93.836375 converged Fitting Repeat 4 # weights: 305 initial value 95.519917 iter 10 value 94.056766 iter 20 value 94.049020 iter 30 value 87.851547 iter 40 value 87.188518 iter 50 value 86.780192 iter 60 value 85.012995 iter 70 value 82.495938 iter 80 value 82.446066 iter 90 value 82.443646 final value 82.442996 converged Fitting Repeat 5 # weights: 305 initial value 94.877531 iter 10 value 93.840347 iter 20 value 92.832217 iter 30 value 92.691199 iter 40 value 92.567767 iter 50 value 88.923583 iter 60 value 88.914761 iter 70 value 88.712208 iter 80 value 87.462541 iter 90 value 78.451737 iter 100 value 76.626194 final value 76.626194 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.240750 iter 10 value 93.844728 iter 20 value 93.838375 final value 93.837849 converged Fitting Repeat 2 # weights: 507 initial value 103.262005 iter 10 value 94.030976 iter 20 value 93.273732 iter 30 value 82.053101 iter 40 value 78.695136 iter 50 value 78.096664 iter 60 value 78.039567 iter 70 value 77.962917 iter 80 value 77.961971 iter 90 value 77.960703 iter 100 value 77.960561 final value 77.960561 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.785552 iter 10 value 94.060806 iter 20 value 94.052628 iter 30 value 92.954011 iter 40 value 87.288766 iter 50 value 86.045997 iter 60 value 85.752909 iter 70 value 83.975135 iter 80 value 81.186183 iter 90 value 80.650784 iter 100 value 80.222994 final value 80.222994 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.471729 iter 10 value 94.060489 iter 20 value 94.052934 iter 30 value 93.877744 iter 40 value 93.357655 iter 50 value 93.269915 iter 60 value 92.282347 iter 70 value 92.281614 iter 80 value 92.281099 iter 90 value 92.281055 iter 100 value 83.723381 final value 83.723381 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.612832 iter 10 value 92.698641 iter 20 value 92.684864 iter 30 value 92.679486 iter 40 value 92.577810 iter 50 value 92.556466 iter 60 value 92.556357 iter 70 value 92.547927 iter 80 value 87.344200 iter 90 value 84.482712 iter 100 value 82.611061 final value 82.611061 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 125.436861 final value 117.890295 converged Fitting Repeat 2 # weights: 305 initial value 118.452681 iter 10 value 112.019169 iter 20 value 111.641459 final value 111.641314 converged Fitting Repeat 3 # weights: 305 initial value 122.554990 final value 117.890295 converged Fitting Repeat 4 # weights: 305 initial value 131.921100 final value 117.890295 converged Fitting Repeat 5 # weights: 305 initial value 119.495730 final value 117.890295 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Thu Feb 2 10:05:33 2023 *********************************************** Number of test functions: 8 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 8 test functions, 0 errors, 0 failures Number of test functions: 8 Number of errors: 0 Number of failures: 0 Warning messages: 1: The `.data` argument of `add_column()` must have unique names as of tibble 3.0.0. ℹ Use `.name_repair = "minimal"`. ℹ The deprecated feature was likely used in the tibble package. Please report the issue at <https://github.com/tidyverse/tibble/issues>. 2: `repeats` has no meaning for this resampling method. 3: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 53.688 0.749 78.066
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 37.033 | 0.360 | 38.347 | |
FreqInteractors | 0.287 | 0.004 | 0.420 | |
calculateAAC | 0.078 | 0.000 | 0.079 | |
calculateAutocor | 0.707 | 0.032 | 0.755 | |
calculateBE | 0.238 | 0.000 | 0.239 | |
calculateCTDC | 0.131 | 0.000 | 0.144 | |
calculateCTDD | 0.940 | 0.015 | 0.964 | |
calculateCTDT | 0.299 | 0.000 | 0.299 | |
calculateCTriad | 0.454 | 0.008 | 0.469 | |
calculateDC | 0.148 | 0.004 | 0.157 | |
calculateF | 0.713 | 0.000 | 0.726 | |
calculateKSAAP | 0.144 | 0.004 | 0.150 | |
calculateQD_Sm | 2.295 | 0.008 | 2.339 | |
calculateTC | 2.450 | 0.064 | 2.534 | |
calculateTC_Sm | 0.310 | 0.000 | 0.311 | |
corr_plot | 38.342 | 0.303 | 40.340 | |
enrichfindP | 0.427 | 0.016 | 15.100 | |
enrichfind_hp | 0.034 | 0.008 | 1.381 | |
enrichplot | 0.351 | 0.001 | 0.452 | |
filter_missing_values | 0.002 | 0.000 | 0.001 | |
getFASTA | 0.886 | 0.004 | 8.696 | |
getHPI | 0.001 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.000 | 0.001 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.000 | 0.002 | 0.001 | |
plotPPI | 0.074 | 0.001 | 0.114 | |
pred_ensembel | 18.368 | 0.208 | 19.032 | |
var_imp | 39.809 | 0.395 | 40.924 | |