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This page was generated on 2023-02-03 02:36:17 -0000 (Fri, 03 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4039 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the QFeatures package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/QFeatures.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1550/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| QFeatures 1.9.2 (landing page) Laurent Gatto
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | ERROR | skipped | |||||||||
| Package: QFeatures |
| Version: 1.9.2 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data QFeatures |
| StartedAt: 2023-02-01 20:15:51 -0000 (Wed, 01 Feb 2023) |
| EndedAt: 2023-02-01 20:17:15 -0000 (Wed, 01 Feb 2023) |
| EllapsedTime: 84.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data QFeatures ### ############################################################################## ############################################################################## * checking for file ‘QFeatures/DESCRIPTION’ ... OK * preparing ‘QFeatures’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Processing.Rmd’ using rmarkdown Quitting from lines 43-44 (Processing.Rmd) Error: processing vignette 'Processing.Rmd' failed with diagnostics: error in evaluating the argument 'path' in selecting a method for function 'basename': there is no package called 'msdata' --- failed re-building ‘Processing.Rmd’ --- re-building ‘QFeatures.Rmd’ using rmarkdown The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/QFeatures_files/figure-html/featuresplot-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/QFeatures_files/figure-html/plotstat3-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/QFeatures_files/figure-html/plotstat-1.png" but not available. --- finished re-building ‘QFeatures.Rmd’ --- re-building ‘Visualization.Rmd’ using rmarkdown The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/plot-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/plot2-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/plot_assay-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/hist_rowData-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/ggplot_rowData-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/ComplexHeatmap-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/ComplexHeatmap_annotations-1.png" but not available. The magick package is required to crop "/tmp/RtmpG7v0AP/Rbuild1842a8fb1e9ad/QFeatures/vignettes/Visualization_files/figure-html/longFormat-1.png" but not available. --- finished re-building ‘Visualization.Rmd’ SUMMARY: processing the following file failed: ‘Processing.Rmd’ Error: Vignette re-building failed. Execution halted