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This page was generated on 2023-02-03 02:35:58 -0000 (Fri, 03 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4039
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for gcapc on kunpeng1


To the developers/maintainers of the gcapc package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gcapc.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 727/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gcapc 1.23.0  (landing page)
Mingxiang Teng
Snapshot Date: 2023-02-01 03:13:00 -0000 (Wed, 01 Feb 2023)
git_url: https://git.bioconductor.org/packages/gcapc
git_branch: master
git_last_commit: 353104a
git_last_commit_date: 2022-11-01 15:14:56 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: gcapc
Version: 1.23.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gcapc
StartedAt: 2023-02-01 16:18:50 -0000 (Wed, 01 Feb 2023)
EndedAt: 2023-02-01 16:19:54 -0000 (Wed, 01 Feb 2023)
EllapsedTime: 64.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gcapc
###
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* checking for file ‘gcapc/DESCRIPTION’ ... OK
* preparing ‘gcapc’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘gcapc.Rmd’ using rmarkdown
Quitting from lines 176-178 (gcapc.Rmd) 
Error: processing vignette 'gcapc.Rmd' failed with diagnostics:
BSgenome.Hsapiens.UCSC.hg19 package is not currently installed.
  You first need to install it, which you can do with:
      library(BiocManager)
      install("BSgenome.Hsapiens.UCSC.hg19")
--- failed re-building ‘gcapc.Rmd’

SUMMARY: processing the following file failed:
  ‘gcapc.Rmd’

Error: Vignette re-building failed.
Execution halted