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This page was generated on 2023-02-03 02:36:01 -0000 (Fri, 03 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4039
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BUILD results for h5vc on kunpeng1


To the developers/maintainers of the h5vc package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/h5vc.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 875/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
h5vc 2.33.0  (landing page)
Paul Theodor Pyl
Snapshot Date: 2023-02-01 03:13:00 -0000 (Wed, 01 Feb 2023)
git_url: https://git.bioconductor.org/packages/h5vc
git_branch: master
git_last_commit: a9ce41f
git_last_commit_date: 2022-11-01 15:08:58 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: h5vc
Version: 2.33.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data h5vc
StartedAt: 2023-02-01 17:04:01 -0000 (Wed, 01 Feb 2023)
EndedAt: 2023-02-01 17:05:49 -0000 (Wed, 01 Feb 2023)
EllapsedTime: 108.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data h5vc
###
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* checking for file ‘h5vc/DESCRIPTION’ ... OK
* preparing ‘h5vc’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘h5vc.simple.genome.browser.Rmd’ using rmarkdown
[WARNING] This document format requires a nonempty <title> element.
  Defaulting to 'h5vc.simple.genome.browser.knit' as the title.
  To specify a title, use 'title' in metadata or --metadata title="...".
--- finished re-building ‘h5vc.simple.genome.browser.Rmd’

--- re-building ‘h5vc.tour.Rmd’ using rmarkdown
Quitting from lines 351-360 (h5vc.tour.Rmd) 
Error: processing vignette 'h5vc.tour.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function '%in%': object 'Hsapiens' not found
--- failed re-building ‘h5vc.tour.Rmd’

SUMMARY: processing the following file failed:
  ‘h5vc.tour.Rmd’

Error: Vignette re-building failed.
Execution halted