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This page was generated on 2023-02-08 01:14:59 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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INSTALL results for DelayedArray on kunpeng1


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raw results

Package 494/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DelayedArray 0.25.0  (landing page)
Hervé Pagès
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/DelayedArray
git_branch: master
git_last_commit: 3fc1ee7
git_last_commit_date: 2023-01-19 17:08:05 -0000 (Thu, 19 Jan 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    OK    ERROR  

Summary

Package: DelayedArray
Version: 0.25.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL DelayedArray
StartedAt: 2023-02-06 01:54:43 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 01:55:27 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 43.8 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL DelayedArray
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘DelayedArray’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c R_init_DelayedArray.c -o R_init_DelayedArray.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c abind.c -o abind.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c array_selection.c -o array_selection.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c compress_atomic_vector.c -o compress_atomic_vector.o
compress_atomic_vector.c: In function ‘C_encode_atomic_vector’:
compress_atomic_vector.c:66:16: warning: ‘ans’ is used uninitialized [-Wuninitialized]
   66 |         return ans;
      |                ^~~
compress_atomic_vector.c: In function ‘C_decode_atomic_vector’:
compress_atomic_vector.c:73:16: warning: ‘ans’ is used uninitialized [-Wuninitialized]
   73 |         return ans;
      |                ^~~
compress_atomic_vector.c: In function ‘C_compress_atomic_vector’:
compress_atomic_vector.c:85:16: warning: ‘ans’ is used uninitialized [-Wuninitialized]
   85 |         return ans;
      |                ^~~
compress_atomic_vector.c: In function ‘C_decompress_atomic_vector’:
compress_atomic_vector.c:92:16: warning: ‘ans’ is used uninitialized [-Wuninitialized]
   92 |         return ans;
      |                ^~~
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c sparseMatrix_utils.c -o sparseMatrix_utils.o
gcc -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o abind.o array_selection.o compress_atomic_vector.o sparseMatrix_utils.o -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-DelayedArray/00new/DelayedArray/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘rowsum’ in package ‘DelayedArray’
Creating a new generic function for ‘apply’ in package ‘DelayedArray’
Creating a new generic function for ‘sweep’ in package ‘DelayedArray’
Creating a new generic function for ‘scale’ in package ‘DelayedArray’
Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DelayedArray)