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This page was generated on 2023-02-08 01:15:07 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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BUILD results for GRaNIE on kunpeng1


To the developers/maintainers of the GRaNIE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GRaNIE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 840/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GRaNIE 1.3.20  (landing page)
Christian Arnold
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/GRaNIE
git_branch: master
git_last_commit: 35450cf
git_last_commit_date: 2023-02-01 20:30:08 -0000 (Wed, 01 Feb 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: GRaNIE
Version: 1.3.20
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GRaNIE
StartedAt: 2023-02-06 09:03:09 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 09:04:19 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 70.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GRaNIE
###
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* checking for file ‘GRaNIE/DESCRIPTION’ ... OK
* preparing ‘GRaNIE’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GRaNIE_packageDetails.Rmd’ using rmarkdown
--- finished re-building ‘GRaNIE_packageDetails.Rmd’

--- re-building ‘GRaNIE_singleCell_eGRNs.Rmd’ using rmarkdown
[WARNING] Could not parse YAML metadata at line 17 column 1: leading empty lines contain more spaces than the first non-empty line in scalar: "       \n"
[WARNING] This document format requires a nonempty <title> element.
  Defaulting to 'GRaNIE_singleCell_eGRNs.knit' as the title.
  To specify a title, use 'title' in metadata or --metadata title="...".
--- finished re-building ‘GRaNIE_singleCell_eGRNs.Rmd’

--- re-building ‘GRaNIE_workflow.Rmd’ using rmarkdown
Quitting from lines 283-286 (GRaNIE_workflow.Rmd) 
Error: processing vignette 'GRaNIE_workflow.Rmd' failed with diagnostics:
`false` must be a vector, not `NULL`.
--- failed re-building ‘GRaNIE_workflow.Rmd’

SUMMARY: processing the following file failed:
  ‘GRaNIE_workflow.Rmd’

Error: Vignette re-building failed.
Execution halted