Build/check report for BioC 3.17 - BUILD results for LymphoSeq on kunpeng1

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This page was generated on 2023-02-08 01:15:11 -0000 (Wed, 08 Feb 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
kunpeng1	Linux (Ubuntu 22.04.1 LTS)	aarch64	R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences"	4164
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for LymphoSeq on kunpeng1

To the developers/maintainers of the LymphoSeq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/LymphoSeq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

LymphoSeq 1.27.0 (landing page)
David Coffey

Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)

git_url: https://git.bioconductor.org/packages/LymphoSeq

git_branch: master

git_last_commit: 7d4ee8c

git_last_commit_date: 2022-11-01 15:13:34 -0000 (Tue, 01 Nov 2022)

kunpeng1

Linux (Ubuntu 22.04.1 LTS) / aarch64

ERROR

skipped

Summary

Package: LymphoSeq

Version: 1.27.0

Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data LymphoSeq

StartedAt: 2023-02-06 09:56:56 -0000 (Mon, 06 Feb 2023)

EndedAt: 2023-02-06 09:56:57 -0000 (Mon, 06 Feb 2023)

EllapsedTime: 1.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data LymphoSeq
###
##############################################################################
##############################################################################


* checking for file ‘LymphoSeq/DESCRIPTION’ ... OK
* preparing ‘LymphoSeq’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependency ‘msa’ is not available for package ‘LymphoSeq’
* removing ‘/tmp/RtmpvuYQO7/Rinst136b16431773b5/LymphoSeq’
      -----------------------------------
ERROR: package installation failed