| Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-02-08 01:15:23 -0000 (Wed, 08 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4164 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the Rbwa package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rbwa.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1596/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Rbwa 1.3.0 (landing page) Jean-Philippe Fortin
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | ERROR | ERROR | skipped | |||||||||
| Package: Rbwa |
| Version: 1.3.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rbwa |
| StartedAt: 2023-02-06 12:59:07 -0000 (Mon, 06 Feb 2023) |
| EndedAt: 2023-02-06 12:59:09 -0000 (Mon, 06 Feb 2023) |
| EllapsedTime: 2.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rbwa
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* checking for file ‘Rbwa/DESCRIPTION’ ... OK
* preparing ‘Rbwa’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
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* installing *source* package ‘Rbwa’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -Wall -O2 -c utils.c -o utils.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -Wall -O2 -c kthread.c -o kthread.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -Wall -O2 -c kstring.c -o kstring.o
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -Wall -O2 -c ksw.c -o ksw.o
ksw.c:29:10: fatal error: emmintrin.h: No such file or directory
29 | #include <emmintrin.h>
| ^~~~~~~~~~~~~
compilation terminated.
make: *** [/home/biocbuild/bbs-3.17-bioc/R/etc/Makeconf:191: ksw.o] Error 1
ERROR: compilation failed for package ‘Rbwa’
* removing ‘/tmp/RtmpXusluY/Rinst15fc2e536d1551/Rbwa’
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ERROR: package installation failed