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This page was generated on 2023-02-08 01:15:30 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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BUILD results for SPOTlight on kunpeng1


To the developers/maintainers of the SPOTlight package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SPOTlight.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1940/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SPOTlight 1.3.0  (landing page)
Marc Elosua-Bayes
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/SPOTlight
git_branch: master
git_last_commit: e71b201
git_last_commit_date: 2022-11-01 15:26:52 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: SPOTlight
Version: 1.3.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SPOTlight
StartedAt: 2023-02-06 15:18:02 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 15:18:47 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 45.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SPOTlight
###
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* checking for file ‘SPOTlight/DESCRIPTION’ ... OK
* preparing ‘SPOTlight’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘SPOTlight_kidney.Rmd’ using rmarkdown
Quitting from lines 48-54 (SPOTlight_kidney.Rmd) 
Error: processing vignette 'SPOTlight_kidney.Rmd' failed with diagnostics:
there is no package called 'SpatialExperiment'
--- failed re-building ‘SPOTlight_kidney.Rmd’

SUMMARY: processing the following file failed:
  ‘SPOTlight_kidney.Rmd’

Error: Vignette re-building failed.
Execution halted