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This page was generated on 2023-02-08 01:15:32 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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BUILD results for TADCompare on kunpeng1


To the developers/maintainers of the TADCompare package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TADCompare.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2004/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TADCompare 1.9.0  (landing page)
Kellen Cresswell
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/TADCompare
git_branch: master
git_last_commit: f8a0149
git_last_commit_date: 2022-11-01 15:22:10 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: TADCompare
Version: 1.9.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TADCompare
StartedAt: 2023-02-06 15:35:32 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 15:38:38 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 185.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TADCompare
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* checking for file ‘TADCompare/DESCRIPTION’ ... OK
* preparing ‘TADCompare’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Input_Data.Rmd’ using rmarkdown
The magick package is required to crop "/tmp/RtmpuUMt21/Rbuild1840af23b19a17/TADCompare/vignettes/Input_Data_files/figure-html/unnamed-chunk-3-1.png" but not available.
--- finished re-building ‘Input_Data.Rmd’

--- re-building ‘Ontology_Analysis.Rmd’ using rmarkdown
--- finished re-building ‘Ontology_Analysis.Rmd’

--- re-building ‘TADCompare.Rmd’ using rmarkdown
The magick package is required to crop "/tmp/RtmpuUMt21/Rbuild1840af23b19a17/TADCompare/vignettes/TADCompare_files/figure-html/unnamed-chunk-6-1.png" but not available.
Quitting from lines 96-103 (TADCompare.Rmd) 
Error: processing vignette 'TADCompare.Rmd' failed with diagnostics:
Must group by variables found in `.data`.
✖ Column `Group` is not found.
--- failed re-building ‘TADCompare.Rmd’

SUMMARY: processing the following file failed:
  ‘TADCompare.Rmd’

Error: Vignette re-building failed.
Execution halted