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This page was generated on 2023-02-08 01:14:51 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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BUILD results for bambu on kunpeng1


To the developers/maintainers of the bambu package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bambu.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 107/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bambu 3.1.5  (landing page)
Ying Chen
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/bambu
git_branch: master
git_last_commit: bbe4484
git_last_commit_date: 2023-01-13 01:59:25 -0000 (Fri, 13 Jan 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: bambu
Version: 3.1.5
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data bambu
StartedAt: 2023-02-06 05:02:43 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 05:14:07 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 684.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data bambu
###
##############################################################################
##############################################################################


* checking for file ‘bambu/DESCRIPTION’ ... OK
* preparing ‘bambu’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘bambu.Rmd’ using rmarkdown
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc62d52d98_3847'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcfd46437_3849'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc7d91d11e_3851'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcd236ae7_3853'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc2cdbbd96_3855'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc62d52d98_3847'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcfd46437_3849'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc7d91d11e_3851'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcd236ae7_3853'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc2cdbbd96_3855'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc62d52d98_3847'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcfd46437_3849'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc7d91d11e_3851'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcd236ae7_3853'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc2cdbbd96_3855'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/d6ac321e4da5c_3845'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc62d52d98_3847'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcfd46437_3849'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc7d91d11e_3851'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbcd236ae7_3853'
[E::idx_find_and_load] Could not retrieve index file for '/home/biocbuild/.cache/R/ExperimentHub/21fcbc2cdbbd96_3855'
Quitting from lines 270-272 (bambu.Rmd) 
Error: processing vignette 'bambu.Rmd' failed with diagnostics:
`...` must be empty.
✖ Problematic argument:
• all = TRUE
--- failed re-building ‘bambu.Rmd’

SUMMARY: processing the following file failed:
  ‘bambu.Rmd’

Error: Vignette re-building failed.
Execution halted