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This page was generated on 2023-02-08 01:15:06 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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BUILD results for ggcyto on kunpeng1


To the developers/maintainers of the ggcyto package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ggcyto.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 800/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggcyto 1.27.4  (landing page)
Mike Jiang
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/ggcyto
git_branch: master
git_last_commit: 37886ca
git_last_commit_date: 2022-12-12 19:22:00 -0000 (Mon, 12 Dec 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: ggcyto
Version: 1.27.4
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ggcyto
StartedAt: 2023-02-06 08:46:06 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 08:47:42 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 95.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ggcyto
###
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* checking for file ‘ggcyto/DESCRIPTION’ ... OK
* preparing ‘ggcyto’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* saving partial Rd database
* creating vignettes ... ERROR
--- re-building ‘Top_features_of_ggcyto.Rmd’ using rmarkdown
Quitting from lines 100-115 (Top_features_of_ggcyto.Rmd) 
Error: processing vignette 'Top_features_of_ggcyto.Rmd' failed with diagnostics:
there is no package called 'openCyto'
--- failed re-building ‘Top_features_of_ggcyto.Rmd’

--- re-building ‘autoplot.Rmd’ using rmarkdown
--- finished re-building ‘autoplot.Rmd’

--- re-building ‘ggcyto.GatingSet.Rmd’ using rmarkdown
--- finished re-building ‘ggcyto.GatingSet.Rmd’

--- re-building ‘ggcyto.flowSet.Rmd’ using rmarkdown
Quitting from lines 139-141 (ggcyto.flowSet.Rmd) 
Error: processing vignette 'ggcyto.flowSet.Rmd' failed with diagnostics:
there is no package called 'openCyto'
--- failed re-building ‘ggcyto.flowSet.Rmd’

SUMMARY: processing the following files failed:
  ‘Top_features_of_ggcyto.Rmd’ ‘ggcyto.flowSet.Rmd’

Error: Vignette re-building failed.
Execution halted