| Back to Build/check report for BioC 3.17 | 
  | 
This page was generated on 2023-02-08 01:15:07 -0000 (Wed, 08 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs | 
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4164 | 
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| 
To the developers/maintainers of the graper package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page.  | 
| Package 842/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.15.0  (landing page) Britta Velten 
  | kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
| Package: graper | 
| Version: 1.15.0 | 
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings graper_1.15.0.tar.gz | 
| StartedAt: 2023-02-07 03:42:20 -0000 (Tue, 07 Feb 2023) | 
| EndedAt: 2023-02-07 03:44:09 -0000 (Tue, 07 Feb 2023) | 
| EllapsedTime: 109.1 seconds | 
| RetCode: 0 | 
| Status: OK | 
| CheckDir: graper.Rcheck | 
| Warnings: 0 | 
##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings graper_1.15.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2023-01-14 r83615)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
    GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.1 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.15.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
* checking installed package size ... NOTE
  installed size is  6.1Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘example_linear.Rmd’ using ‘UTF-8’... OK
  ‘example_logistic.Rmd’ using ‘UTF-8’... OK
 NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/arg.hpp:25,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:13,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:27,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/lexical_cast.hpp:30,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/tools/convert_from_string.hpp:15,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/constants/constants.hpp:14,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:20,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
  194 | failed ************ (Pred::************
      |                     ^~~~~~~~~~~~~~~~~~~
  195 |       assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |     );
      |     ~                
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
  194 | failed ************ (Pred::************
      |                     ^~~~~~~~~~~~~~~~~~~
      |                     -
  195 |       assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |     );
      |     ~                
      |     -
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
  199 | failed ************ (boost::mpl::not_<Pred>::************
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |       assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  201 |     );
      |     ~                
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
  199 | failed ************ (boost::mpl::not_<Pred>::************
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      |                     -
  200 |       assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  201 |     );
      |     ~                
      |     -
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.17-bioc/R/lib -lRblas -lgfortran -lm -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.269
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.068
ELB improved by 265.2
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.648
ELB improved by 65.4203
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.699
ELB improved by 41.9487
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.415
ELB improved by 18.2843
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.141
ELB improved by 7.27339
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.952
ELB improved by 4.18966
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.699
ELB improved by 3.25274
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.849
ELB improved by 2.84998
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.265
ELB improved by 2.58368
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.91
ELB improved by 2.35508
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.779
ELB improved by 2.13166
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.884
ELB improved by 1.89503
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.248
ELB improved by 1.63537
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.891
ELB improved by 1.35744
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.807
ELB improved by 1.08365
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.964
ELB improved by 0.843041
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.311
ELB improved by 0.653283
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.796
ELB improved by 0.5144
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.381
ELB improved by 0.4156
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.037
ELB improved by 0.344033
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.747
ELB improved by 0.289517
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.502
ELB improved by 0.245616
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.293
ELB improved by 0.20889
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.115
ELB improved by 0.17772
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.964
ELB improved by 0.151372
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.834
ELB improved by 0.129387
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.723
ELB improved by 0.111294
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.627
ELB improved by 0.09655
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.542
ELB improved by 0.0846054
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.467
ELB improved by 0.0749651
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.4
ELB improved by 0.0672148
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.339
ELB improved by 0.0610145
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.283
ELB improved by 0.0560801
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.23
ELB improved by 0.0521708
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.181
ELB improved by 0.0490816
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.135
ELB improved by 0.0466408
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.09
ELB improved by 0.0447083
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.047
ELB improved by 0.0431725
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.005
ELB improved by 0.0419464
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.964
ELB improved by 0.0409633
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.924
ELB improved by 0.0401722
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.884
ELB improved by 0.0395337
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.845
ELB improved by 0.039017
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.807
ELB improved by 0.0385971
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.768
ELB improved by 0.0382534
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.73
ELB improved by 0.0379679
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.693
ELB improved by 0.0377247
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.655
ELB improved by 0.0375091
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.618
ELB improved by 0.0373075
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.581
ELB improved by 0.0371073
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.544
ELB improved by 0.0368967
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.507
ELB improved by 0.0366651
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.471
ELB improved by 0.0364031
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.435
ELB improved by 0.0361027
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.399
ELB improved by 0.0357576
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.364
ELB improved by 0.0353632
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.329
ELB improved by 0.0349166
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.294
ELB improved by 0.0344169
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.26
ELB improved by 0.0338645
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.227
ELB improved by 0.0332609
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.194
ELB improved by 0.0326087
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.163
ELB improved by 0.0319104
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.131
ELB improved by 0.0311685
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.101
ELB improved by 0.0303848
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.071
ELB improved by 0.0295604
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.043
ELB improved by 0.0286956
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.015
ELB improved by 0.0277901
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.988
ELB improved by 0.0268439
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.962
ELB improved by 0.0258581
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.937
ELB improved by 0.0248349
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.914
ELB improved by 0.023779
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.891
ELB improved by 0.0226975
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.869
ELB improved by 0.0215994
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.849
ELB improved by 0.0204955
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.829
ELB improved by 0.0193973
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.811
ELB improved by 0.0183162
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.794
ELB improved by 0.0172629
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.778
ELB improved by 0.0162464
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.762
ELB improved by 0.0152741
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.748
ELB improved by 0.0143512
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.735
ELB improved by 0.0134811
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.722
ELB improved by 0.0126655
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.71
ELB improved by 0.0119045
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.699
ELB improved by 0.0111973
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.688
ELB improved by 0.0105418
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.678
ELB improved by 0.00993546
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-906.019
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.884
ELB improved by 342.135
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.627
ELB improved by 58.2571
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.356
ELB improved by 32.271
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.842
ELB improved by 13.5144
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.655
ELB improved by 6.18668
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.481
ELB improved by 4.17435
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.06
ELB improved by 3.42064
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.955
ELB improved by 3.10521
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.01
ELB improved by 2.94483
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.207
ELB improved by 2.80262
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.596
ELB improved by 2.61139
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.262
ELB improved by 2.33425
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.292
ELB improved by 1.96982
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.732
ELB improved by 1.56029
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.563
ELB improved by 1.16886
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.721
ELB improved by 0.842115
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.125
ELB improved by 0.595264
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.704
ELB improved by 0.421975
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.397
ELB improved by 0.306612
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.165
ELB improved by 0.231765
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.982
ELB improved by 0.182949
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.832
ELB improved by 0.150171
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.705
ELB improved by 0.127239
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.594
ELB improved by 0.110487
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.497
ELB improved by 0.0977633
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.409
ELB improved by 0.0877823
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.329
ELB improved by 0.0797558
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.256
ELB improved by 0.0731808
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.188
ELB improved by 0.0677233
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.125
ELB improved by 0.0631526
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.066
ELB improved by 0.0593035
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.01
ELB improved by 0.0560542
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.956
ELB improved by 0.0533129
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.905
ELB improved by 0.0510089
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.856
ELB improved by 0.0490873
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.809
ELB improved by 0.0475053
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.762
ELB improved by 0.0462293
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.717
ELB improved by 0.0452331
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.673
ELB improved by 0.0444967
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.629
ELB improved by 0.0440052
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.585
ELB improved by 0.0437481
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.541
ELB improved by 0.043719
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.497
ELB improved by 0.0439151
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.0443369
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.408
ELB improved by 0.0449885
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.362
ELB improved by 0.0458778
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.315
ELB improved by 0.0470162
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.267
ELB improved by 0.0484193
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.217
ELB improved by 0.0501075
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.164
ELB improved by 0.0521065
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.11
ELB improved by 0.0544483
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.053
ELB improved by 0.0571723
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.993
ELB improved by 0.0603268
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.929
ELB improved by 0.0639709
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.86
ELB improved by 0.0681769
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.787
ELB improved by 0.0730337
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.709
ELB improved by 0.0786514
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.624
ELB improved by 0.0851673
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.531
ELB improved by 0.0927566
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.429
ELB improved by 0.101648
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.317
ELB improved by 0.112151
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.192
ELB improved by 0.124707
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.052
ELB improved by 0.13998
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.893
ELB improved by 0.159037
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.71
ELB improved by 0.18367
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.493
ELB improved by 0.216964
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.229
ELB improved by 0.263995
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.897
ELB improved by 0.331555
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.473
ELB improved by 0.423563
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.941
ELB improved by 0.532181
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.296
ELB improved by 0.644966
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.522
ELB improved by 0.77482
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.553
ELB improved by 0.968319
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.248
ELB improved by 1.30542
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.371
ELB improved by 1.87707
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.932
ELB improved by 2.43876
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.528
ELB improved by 2.40438
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.582
ELB improved by 1.94543
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.172
ELB improved by 1.41037
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.232
ELB improved by 0.939532
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.641
ELB improved by 0.590768
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.271
ELB improved by 0.37054
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.025
ELB improved by 0.245535
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.848
ELB improved by 0.177072
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.711
ELB improved by 0.137732
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.599
ELB improved by 0.111377
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.509
ELB improved by 0.0901904
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.437
ELB improved by 0.0721355
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.379
ELB improved by 0.0577548
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.332
ELB improved by 0.0474265
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.291
ELB improved by 0.0406282
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.255
ELB improved by 0.0364319
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.221
ELB improved by 0.0339696
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.188
ELB improved by 0.0325418
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.157
ELB improved by 0.031543
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.126
ELB improved by 0.0303959
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.098
ELB improved by 0.0286078
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.072
ELB improved by 0.0259427
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.049
ELB improved by 0.0225567
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.03
ELB improved by 0.0189168
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.015
ELB improved by 0.0155334
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.002
ELB improved by 0.0127273
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.991
ELB improved by 0.010578
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.982
ELB improved by 0.00900578
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.303
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.509
ELB improved by 278.794
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.609
ELB improved by 57.9006
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.846
ELB improved by 40.7623
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.463
ELB improved by 20.3834
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.786
ELB improved by 8.67679
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.444
ELB improved by 5.34272
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.583
ELB improved by 4.86065
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.658
ELB improved by 4.92503
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.714
ELB improved by 4.94348
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.131
ELB improved by 4.58342
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.312
ELB improved by 3.81864
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.391
ELB improved by 2.92112
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.248
ELB improved by 2.14373
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.685
ELB improved by 1.56278
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.526
ELB improved by 1.15824
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.639
ELB improved by 0.887408
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.93
ELB improved by 0.709322
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.334
ELB improved by 0.59534
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.806
ELB improved by 0.528072
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.314
ELB improved by 0.492049
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.84
ELB improved by 0.473843
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.372
ELB improved by 0.468658
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.892
ELB improved by 0.480089
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.38
ELB improved by 0.511973
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.816
ELB improved by 0.56332
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.189
ELB improved by 0.627799
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.49
ELB improved by 0.698905
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.709
ELB improved by 0.780872
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.818
ELB improved by 0.891227
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.761
ELB improved by 1.05692
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.441
ELB improved by 1.31922
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.718
ELB improved by 1.72344
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.522
ELB improved by 2.19557
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.036
ELB improved by 2.48655
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.43
ELB improved by 2.60563
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.753
ELB improved by 2.6772
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.205
ELB improved by 2.54797
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.263
ELB improved by 1.94253
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.037
ELB improved by 1.22532
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.294
ELB improved by 0.743096
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.819
ELB improved by 0.47521
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.484
ELB improved by 0.33457
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.224
ELB improved by 0.260373
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.009
ELB improved by 0.214807
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.834
ELB improved by 0.174965
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.7
ELB improved by 0.134651
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.601
ELB improved by 0.0990001
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.528
ELB improved by 0.0723784
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.474
ELB improved by 0.0544523
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.431
ELB improved by 0.0427097
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.396
ELB improved by 0.0348007
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.367
ELB improved by 0.0291914
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.342
ELB improved by 0.0250049
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.32
ELB improved by 0.0217513
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.301
ELB improved by 0.0191466
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.284
ELB improved by 0.0170155
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.269
ELB improved by 0.015243
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.255
ELB improved by 0.0137495
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.243
ELB improved by 0.0124778
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.231
ELB improved by 0.0113857
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.221
ELB improved by 0.0104409
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.211
ELB improved by 0.00961835
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.301
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.657
ELB improved by 306.643
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.911
ELB improved by 57.7464
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.974
ELB improved by 37.9364
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.909
ELB improved by 17.0659
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.198
ELB improved by 7.71013
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.489
ELB improved by 5.70978
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.936
ELB improved by 5.55277
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.926
ELB improved by 6.00947
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.534
ELB improved by 6.3927
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.414
ELB improved by 6.11926
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.361
ELB improved by 5.05306
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.646
ELB improved by 3.71528
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.997
ELB improved by 2.64929
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.967
ELB improved by 2.02962
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.074
ELB improved by 1.8931
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.008
ELB improved by 2.06604
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.126
ELB improved by 1.88205
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.641
ELB improved by 1.48464
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.388
ELB improved by 1.25379
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.233
ELB improved by 1.15439
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.076
ELB improved by 1.1571
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.877
ELB improved by 1.1992
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.652
ELB improved by 1.22518
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.37
ELB improved by 1.28136
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.963
ELB improved by 1.40714
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.364
ELB improved by 1.59942
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.53
ELB improved by 1.83422
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.467
ELB improved by 2.06219
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.262
ELB improved by 2.20503
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.076
ELB improved by 2.18652
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.087
ELB improved by 1.98876
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.424
ELB improved by 1.66296
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.137
ELB improved by 1.28749
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.192
ELB improved by 0.944675
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.507
ELB improved by 0.685443
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.997
ELB improved by 0.509732
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.602
ELB improved by 0.394311
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.285
ELB improved by 0.317258
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.021
ELB improved by 0.264115
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.795
ELB improved by 0.226263
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.596
ELB improved by 0.198561
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.418
ELB improved by 0.177838
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.256
ELB improved by 0.162064
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.106
ELB improved by 0.149895
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.966
ELB improved by 0.140413
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.833
ELB improved by 0.13297
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.706
ELB improved by 0.127093
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.584
ELB improved by 0.122421
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.465
ELB improved by 0.118662
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.349
ELB improved by 0.115573
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.236
ELB improved by 0.112942
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.126
ELB improved by 0.110585
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.017
ELB improved by 0.108342
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.911
ELB improved by 0.106076
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.808
ELB improved by 0.103681
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.707
ELB improved by 0.101082
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.608
ELB improved by 0.0982332
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.513
ELB improved by 0.095121
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.422
ELB improved by 0.0917583
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.333
ELB improved by 0.0881797
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.249
ELB improved by 0.0844344
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.168
ELB improved by 0.0805792
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.092
ELB improved by 0.0766713
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.019
ELB improved by 0.0727634
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.95
ELB improved by 0.0689001
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.885
ELB improved by 0.0651168
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.823
ELB improved by 0.0614393
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.766
ELB improved by 0.0578861
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.711
ELB improved by 0.0544701
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.66
ELB improved by 0.0512007
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.612
ELB improved by 0.0480857
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.567
ELB improved by 0.0451322
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.524
ELB improved by 0.0423471
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.485
ELB improved by 0.0397371
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.447
ELB improved by 0.0373076
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.412
ELB improved by 0.0350628
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.379
ELB improved by 0.0330042
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.348
ELB improved by 0.0311306
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.319
ELB improved by 0.0294375
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.291
ELB improved by 0.027917
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.264
ELB improved by 0.0265579
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.239
ELB improved by 0.0253459
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.215
ELB improved by 0.0242641
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.191
ELB improved by 0.0232939
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.169
ELB improved by 0.0224161
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.147
ELB improved by 0.0216117
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.126
ELB improved by 0.0208639
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.106
ELB improved by 0.020159
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.087
ELB improved by 0.0194874
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.068
ELB improved by 0.0188445
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.05
ELB improved by 0.0182304
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.032
ELB improved by 0.0176496
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.015
ELB improved by 0.0171103
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.998
ELB improved by 0.0166233
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.982
ELB improved by 0.0162009
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.966
ELB improved by 0.0158557
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.951
ELB improved by 0.015599
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.935
ELB improved by 0.0154379
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.92
ELB improved by 0.0153714
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.904
ELB improved by 0.0153846
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.889
ELB improved by 0.0154412
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.873
ELB improved by 0.0154776
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.858
ELB improved by 0.0154035
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.843
ELB improved by 0.0151153
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.828
ELB improved by 0.0145266
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.815
ELB improved by 0.013605
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.802
ELB improved by 0.0123961
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.791
ELB improved by 0.011013
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.782
ELB improved by 0.00959542
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.810   0.189   2.991 
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.088 | 0.004 | 0.092 | |
| getPIPs | 0.078 | 0.008 | 0.086 | |
| graper | 0.118 | 0.016 | 0.136 | |
| makeExampleData | 0.013 | 0.000 | 0.013 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.004 | 0.016 | |
| plotELBO | 0.277 | 0.016 | 0.301 | |
| plotGroupPenalties | 1.103 | 0.020 | 1.123 | |
| plotPosterior | 0.706 | 0.008 | 0.714 | |
| predict.graper | 3.109 | 0.048 | 3.158 | |
| print.graper | 0.085 | 0.000 | 0.086 | |