Back to Build/check report for BioC 3.17
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-02-08 01:15:07 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for graper on kunpeng1


To the developers/maintainers of the graper package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 842/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.15.0  (landing page)
Britta Velten
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/graper
git_branch: master
git_last_commit: b25944d
git_last_commit_date: 2022-11-01 15:19:02 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    OK    OK  

Summary

Package: graper
Version: 1.15.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings graper_1.15.0.tar.gz
StartedAt: 2023-02-07 03:42:20 -0000 (Tue, 07 Feb 2023)
EndedAt: 2023-02-07 03:44:09 -0000 (Tue, 07 Feb 2023)
EllapsedTime: 109.1 seconds
RetCode: 0
Status:   OK  
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings graper_1.15.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2023-01-14 r83615)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
    GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.1 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.15.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
* checking installed package size ... NOTE
  installed size is  6.1Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘example_linear.Rmd’ using ‘UTF-8’... OK
  ‘example_logistic.Rmd’ using ‘UTF-8’... OK
 NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck/00check.log’
for details.



Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/arg.hpp:25,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:13,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:27,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/lexical_cast.hpp:30,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/tools/convert_from_string.hpp:15,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/constants/constants.hpp:14,
                 from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:20,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
  194 | failed ************ (Pred::************
      |                     ^~~~~~~~~~~~~~~~~~~
  195 |       assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |     );
      |     ~                
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
  194 | failed ************ (Pred::************
      |                     ^~~~~~~~~~~~~~~~~~~
      |                     -
  195 |       assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |     );
      |     ~                
      |     -
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
  199 | failed ************ (boost::mpl::not_<Pred>::************
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |       assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  201 |     );
      |     ~                
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
  199 | failed ************ (boost::mpl::not_<Pred>::************
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      |                     -
  200 |       assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  201 |     );
      |     ~                
      |     -
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.17-bioc/R/lib -lRblas -lgfortran -lm -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.269
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.068
ELB improved by 265.2

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.648
ELB improved by 65.4203

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.699
ELB improved by 41.9487

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.415
ELB improved by 18.2843

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.141
ELB improved by 7.27339

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.952
ELB improved by 4.18966

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.699
ELB improved by 3.25274

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.849
ELB improved by 2.84998

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.265
ELB improved by 2.58368

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.91
ELB improved by 2.35508

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.779
ELB improved by 2.13166

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.884
ELB improved by 1.89503

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.248
ELB improved by 1.63537

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.891
ELB improved by 1.35744

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.807
ELB improved by 1.08365

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.964
ELB improved by 0.843041

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.311
ELB improved by 0.653283

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.796
ELB improved by 0.5144

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.381
ELB improved by 0.4156

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.037
ELB improved by 0.344033

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.747
ELB improved by 0.289517

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.502
ELB improved by 0.245616

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.293
ELB improved by 0.20889

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.115
ELB improved by 0.17772

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.964
ELB improved by 0.151372

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.834
ELB improved by 0.129387

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.723
ELB improved by 0.111294

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.627
ELB improved by 0.09655

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.542
ELB improved by 0.0846054

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.467
ELB improved by 0.0749651

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.4
ELB improved by 0.0672148

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.339
ELB improved by 0.0610145

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.283
ELB improved by 0.0560801

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.23
ELB improved by 0.0521708

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.181
ELB improved by 0.0490816

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.135
ELB improved by 0.0466408

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.09
ELB improved by 0.0447083

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.047
ELB improved by 0.0431725

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.005
ELB improved by 0.0419464

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.964
ELB improved by 0.0409633

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.924
ELB improved by 0.0401722

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.884
ELB improved by 0.0395337

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.845
ELB improved by 0.039017

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.807
ELB improved by 0.0385971

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.768
ELB improved by 0.0382534

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.73
ELB improved by 0.0379679

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.693
ELB improved by 0.0377247

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.655
ELB improved by 0.0375091

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.618
ELB improved by 0.0373075

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.581
ELB improved by 0.0371073

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.544
ELB improved by 0.0368967

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.507
ELB improved by 0.0366651

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.471
ELB improved by 0.0364031

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.435
ELB improved by 0.0361027

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.399
ELB improved by 0.0357576

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.364
ELB improved by 0.0353632

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.329
ELB improved by 0.0349166

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.294
ELB improved by 0.0344169

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.26
ELB improved by 0.0338645

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.227
ELB improved by 0.0332609

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.194
ELB improved by 0.0326087

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.163
ELB improved by 0.0319104

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.131
ELB improved by 0.0311685

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.101
ELB improved by 0.0303848

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.071
ELB improved by 0.0295604

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.043
ELB improved by 0.0286956

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.015
ELB improved by 0.0277901

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.988
ELB improved by 0.0268439

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.962
ELB improved by 0.0258581

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.937
ELB improved by 0.0248349

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.914
ELB improved by 0.023779

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.891
ELB improved by 0.0226975

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.869
ELB improved by 0.0215994

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.849
ELB improved by 0.0204955

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.829
ELB improved by 0.0193973

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.811
ELB improved by 0.0183162

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.794
ELB improved by 0.0172629

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.778
ELB improved by 0.0162464

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.762
ELB improved by 0.0152741

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.748
ELB improved by 0.0143512

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.735
ELB improved by 0.0134811

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.722
ELB improved by 0.0126655

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.71
ELB improved by 0.0119045

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.699
ELB improved by 0.0111973

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.688
ELB improved by 0.0105418

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.678
ELB improved by 0.00993546

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-906.019
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.884
ELB improved by 342.135

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.627
ELB improved by 58.2571

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.356
ELB improved by 32.271

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.842
ELB improved by 13.5144

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.655
ELB improved by 6.18668

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.481
ELB improved by 4.17435

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.06
ELB improved by 3.42064

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.955
ELB improved by 3.10521

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.01
ELB improved by 2.94483

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.207
ELB improved by 2.80262

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.596
ELB improved by 2.61139

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.262
ELB improved by 2.33425

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.292
ELB improved by 1.96982

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.732
ELB improved by 1.56029

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.563
ELB improved by 1.16886

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.721
ELB improved by 0.842115

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.125
ELB improved by 0.595264

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.704
ELB improved by 0.421975

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.397
ELB improved by 0.306612

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.165
ELB improved by 0.231765

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.982
ELB improved by 0.182949

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.832
ELB improved by 0.150171

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.705
ELB improved by 0.127239

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.594
ELB improved by 0.110487

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.497
ELB improved by 0.0977633

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.409
ELB improved by 0.0877823

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.329
ELB improved by 0.0797558

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.256
ELB improved by 0.0731808

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.188
ELB improved by 0.0677233

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.125
ELB improved by 0.0631526

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.066
ELB improved by 0.0593035

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.01
ELB improved by 0.0560542

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.956
ELB improved by 0.0533129

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.905
ELB improved by 0.0510089

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.856
ELB improved by 0.0490873

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.809
ELB improved by 0.0475053

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.762
ELB improved by 0.0462293

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.717
ELB improved by 0.0452331

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.673
ELB improved by 0.0444967

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.629
ELB improved by 0.0440052

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.585
ELB improved by 0.0437481

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.541
ELB improved by 0.043719

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.497
ELB improved by 0.0439151

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.0443369

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.408
ELB improved by 0.0449885

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.362
ELB improved by 0.0458778

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.315
ELB improved by 0.0470162

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.267
ELB improved by 0.0484193

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.217
ELB improved by 0.0501075

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.164
ELB improved by 0.0521065

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.11
ELB improved by 0.0544483

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.053
ELB improved by 0.0571723

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.993
ELB improved by 0.0603268

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.929
ELB improved by 0.0639709

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.86
ELB improved by 0.0681769

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.787
ELB improved by 0.0730337

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.709
ELB improved by 0.0786514

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.624
ELB improved by 0.0851673

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.531
ELB improved by 0.0927566

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.429
ELB improved by 0.101648

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.317
ELB improved by 0.112151

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.192
ELB improved by 0.124707

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.052
ELB improved by 0.13998

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.893
ELB improved by 0.159037

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.71
ELB improved by 0.18367

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.493
ELB improved by 0.216964

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.229
ELB improved by 0.263995

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.897
ELB improved by 0.331555

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.473
ELB improved by 0.423563

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.941
ELB improved by 0.532181

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.296
ELB improved by 0.644966

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.522
ELB improved by 0.77482

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.553
ELB improved by 0.968319

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.248
ELB improved by 1.30542

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.371
ELB improved by 1.87707

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.932
ELB improved by 2.43876

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.528
ELB improved by 2.40438

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.582
ELB improved by 1.94543

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.172
ELB improved by 1.41037

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.232
ELB improved by 0.939532

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.641
ELB improved by 0.590768

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.271
ELB improved by 0.37054

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.025
ELB improved by 0.245535

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.848
ELB improved by 0.177072

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.711
ELB improved by 0.137732

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.599
ELB improved by 0.111377

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.509
ELB improved by 0.0901904

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.437
ELB improved by 0.0721355

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.379
ELB improved by 0.0577548

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.332
ELB improved by 0.0474265

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.291
ELB improved by 0.0406282

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.255
ELB improved by 0.0364319

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.221
ELB improved by 0.0339696

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.188
ELB improved by 0.0325418

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.157
ELB improved by 0.031543

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.126
ELB improved by 0.0303959

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.098
ELB improved by 0.0286078

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.072
ELB improved by 0.0259427

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.049
ELB improved by 0.0225567

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.03
ELB improved by 0.0189168

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.015
ELB improved by 0.0155334

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.002
ELB improved by 0.0127273

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.991
ELB improved by 0.010578

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.982
ELB improved by 0.00900578

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.303
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.509
ELB improved by 278.794

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.609
ELB improved by 57.9006

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.846
ELB improved by 40.7623

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.463
ELB improved by 20.3834

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.786
ELB improved by 8.67679

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.444
ELB improved by 5.34272

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.583
ELB improved by 4.86065

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.658
ELB improved by 4.92503

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.714
ELB improved by 4.94348

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.131
ELB improved by 4.58342

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.312
ELB improved by 3.81864

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.391
ELB improved by 2.92112

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.248
ELB improved by 2.14373

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.685
ELB improved by 1.56278

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.526
ELB improved by 1.15824

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.639
ELB improved by 0.887408

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.93
ELB improved by 0.709322

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.334
ELB improved by 0.59534

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.806
ELB improved by 0.528072

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.314
ELB improved by 0.492049

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.84
ELB improved by 0.473843

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.372
ELB improved by 0.468658

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.892
ELB improved by 0.480089

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.38
ELB improved by 0.511973

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.816
ELB improved by 0.56332

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.189
ELB improved by 0.627799

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.49
ELB improved by 0.698905

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.709
ELB improved by 0.780872

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.818
ELB improved by 0.891227

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.761
ELB improved by 1.05692

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.441
ELB improved by 1.31922

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.718
ELB improved by 1.72344

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.522
ELB improved by 2.19557

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.036
ELB improved by 2.48655

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.43
ELB improved by 2.60563

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.753
ELB improved by 2.6772

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.205
ELB improved by 2.54797

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.263
ELB improved by 1.94253

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.037
ELB improved by 1.22532

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.294
ELB improved by 0.743096

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.819
ELB improved by 0.47521

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.484
ELB improved by 0.33457

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.224
ELB improved by 0.260373

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.009
ELB improved by 0.214807

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.834
ELB improved by 0.174965

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.7
ELB improved by 0.134651

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.601
ELB improved by 0.0990001

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.528
ELB improved by 0.0723784

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.474
ELB improved by 0.0544523

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.431
ELB improved by 0.0427097

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.396
ELB improved by 0.0348007

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.367
ELB improved by 0.0291914

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.342
ELB improved by 0.0250049

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.32
ELB improved by 0.0217513

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.301
ELB improved by 0.0191466

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.284
ELB improved by 0.0170155

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.269
ELB improved by 0.015243

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.255
ELB improved by 0.0137495

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.243
ELB improved by 0.0124778

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.231
ELB improved by 0.0113857

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.221
ELB improved by 0.0104409

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.211
ELB improved by 0.00961835

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.301
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.657
ELB improved by 306.643

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.911
ELB improved by 57.7464

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.974
ELB improved by 37.9364

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.909
ELB improved by 17.0659

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.198
ELB improved by 7.71013

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.489
ELB improved by 5.70978

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.936
ELB improved by 5.55277

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.926
ELB improved by 6.00947

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.534
ELB improved by 6.3927

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.414
ELB improved by 6.11926

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.361
ELB improved by 5.05306

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.646
ELB improved by 3.71528

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.997
ELB improved by 2.64929

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.967
ELB improved by 2.02962

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.074
ELB improved by 1.8931

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.008
ELB improved by 2.06604

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.126
ELB improved by 1.88205

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.641
ELB improved by 1.48464

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.388
ELB improved by 1.25379

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.233
ELB improved by 1.15439

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.076
ELB improved by 1.1571

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.877
ELB improved by 1.1992

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.652
ELB improved by 1.22518

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.37
ELB improved by 1.28136

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.963
ELB improved by 1.40714

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.364
ELB improved by 1.59942

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.53
ELB improved by 1.83422

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.467
ELB improved by 2.06219

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.262
ELB improved by 2.20503

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.076
ELB improved by 2.18652

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.087
ELB improved by 1.98876

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.424
ELB improved by 1.66296

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.137
ELB improved by 1.28749

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.192
ELB improved by 0.944675

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.507
ELB improved by 0.685443

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.997
ELB improved by 0.509732

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.602
ELB improved by 0.394311

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.285
ELB improved by 0.317258

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.021
ELB improved by 0.264115

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.795
ELB improved by 0.226263

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.596
ELB improved by 0.198561

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.418
ELB improved by 0.177838

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.256
ELB improved by 0.162064

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.106
ELB improved by 0.149895

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.966
ELB improved by 0.140413

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.833
ELB improved by 0.13297

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.706
ELB improved by 0.127093

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.584
ELB improved by 0.122421

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.465
ELB improved by 0.118662

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.349
ELB improved by 0.115573

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.236
ELB improved by 0.112942

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.126
ELB improved by 0.110585

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.017
ELB improved by 0.108342

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.911
ELB improved by 0.106076

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.808
ELB improved by 0.103681

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.707
ELB improved by 0.101082

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.608
ELB improved by 0.0982332

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.513
ELB improved by 0.095121

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.422
ELB improved by 0.0917583

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.333
ELB improved by 0.0881797

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.249
ELB improved by 0.0844344

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.168
ELB improved by 0.0805792

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.092
ELB improved by 0.0766713

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.019
ELB improved by 0.0727634

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.95
ELB improved by 0.0689001

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.885
ELB improved by 0.0651168

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.823
ELB improved by 0.0614393

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.766
ELB improved by 0.0578861

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.711
ELB improved by 0.0544701

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.66
ELB improved by 0.0512007

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.612
ELB improved by 0.0480857

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.567
ELB improved by 0.0451322

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.524
ELB improved by 0.0423471

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.485
ELB improved by 0.0397371

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.447
ELB improved by 0.0373076

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.412
ELB improved by 0.0350628

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.379
ELB improved by 0.0330042

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.348
ELB improved by 0.0311306

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.319
ELB improved by 0.0294375

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.291
ELB improved by 0.027917

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.264
ELB improved by 0.0265579

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.239
ELB improved by 0.0253459

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.215
ELB improved by 0.0242641

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.191
ELB improved by 0.0232939

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.169
ELB improved by 0.0224161

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.147
ELB improved by 0.0216117

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.126
ELB improved by 0.0208639

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.106
ELB improved by 0.020159

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.087
ELB improved by 0.0194874

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.068
ELB improved by 0.0188445

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.05
ELB improved by 0.0182304

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.032
ELB improved by 0.0176496

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.015
ELB improved by 0.0171103

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.998
ELB improved by 0.0166233

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.982
ELB improved by 0.0162009

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.966
ELB improved by 0.0158557

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.951
ELB improved by 0.015599

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.935
ELB improved by 0.0154379

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.92
ELB improved by 0.0153714

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.904
ELB improved by 0.0153846

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.889
ELB improved by 0.0154412

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.873
ELB improved by 0.0154776

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.858
ELB improved by 0.0154035

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.843
ELB improved by 0.0151153

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.828
ELB improved by 0.0145266

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.815
ELB improved by 0.013605

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.802
ELB improved by 0.0123961

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.791
ELB improved by 0.011013

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.782
ELB improved by 0.00959542

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.810   0.189   2.991 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0880.0040.092
getPIPs0.0780.0080.086
graper0.1180.0160.136
makeExampleData0.0130.0000.013
makeExampleDataWithUnequalGroups0.0120.0040.016
plotELBO0.2770.0160.301
plotGroupPenalties1.1030.0201.123
plotPosterior0.7060.0080.714
predict.graper3.1090.0483.158
print.graper0.0850.0000.086