Back to Build/check report for BioC 3.17
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

This page was generated on 2023-02-08 01:15:09 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for idpr on kunpeng1


To the developers/maintainers of the idpr package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/idpr.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 941/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
idpr 1.9.15  (landing page)
William M. McFadden
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/idpr
git_branch: master
git_last_commit: 455a1f1
git_last_commit_date: 2022-12-11 17:40:42 -0000 (Sun, 11 Dec 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: idpr
Version: 1.9.15
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data idpr
StartedAt: 2023-02-06 09:31:08 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 09:32:42 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 94.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data idpr
###
##############################################################################
##############################################################################


* checking for file ‘idpr/DESCRIPTION’ ... OK
* preparing ‘idpr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘chargeHydropathy-vignette.Rmd’ using rmarkdown
--- finished re-building ‘chargeHydropathy-vignette.Rmd’

--- re-building ‘disorderedMatrices-vignette.Rmd’ using rmarkdown
Quitting from lines 343-351 (disorderedMatrices-vignette.Rmd) 
Error: processing vignette 'disorderedMatrices-vignette.Rmd' failed with diagnostics:
there is no package called 'msa'
--- failed re-building ‘disorderedMatrices-vignette.Rmd’

--- re-building ‘idpr-vignette.Rmd’ using rmarkdown
--- finished re-building ‘idpr-vignette.Rmd’

--- re-building ‘iupred-vignette.Rmd’ using rmarkdown
--- finished re-building ‘iupred-vignette.Rmd’

--- re-building ‘sequenceMAP-vignette.Rmd’ using rmarkdown
--- finished re-building ‘sequenceMAP-vignette.Rmd’

--- re-building ‘structuralTendency-vignette.Rmd’ using rmarkdown
--- finished re-building ‘structuralTendency-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘disorderedMatrices-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted