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This page was generated on 2023-02-08 01:15:11 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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INSTALL results for lpsymphony on kunpeng1


To the developers/maintainers of the lpsymphony package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/lpsymphony.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1049/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lpsymphony 1.27.1  (landing page)
Vladislav Kim
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/lpsymphony
git_branch: master
git_last_commit: d048fd8
git_last_commit_date: 2022-12-07 14:24:36 -0000 (Wed, 07 Dec 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  ERROR    ERROR  skipped

Summary

Package: lpsymphony
Version: 1.27.1
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL lpsymphony
StartedAt: 2023-02-06 02:08:02 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 02:08:03 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 1.7 seconds
RetCode: 1
Status:   ERROR  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL lpsymphony
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘lpsymphony’ ...
** using staged installation
configure: loading site script /home/biocbuild/bbs-3.17-bioc/meat/lpsymphony/src/SYMPHONY/share/config.site
checking build system type... ./config.guess: unable to guess system type

This script, last modified 2007-05-17, has failed to recognize
the operating system you are using. It is advised that you
download the most up to date version of the config scripts from

  http://savannah.gnu.org/cgi-bin/viewcvs/*checkout*/config/config/config.guess
and
  http://savannah.gnu.org/cgi-bin/viewcvs/*checkout*/config/config/config.sub

If the version you run (./config.guess) is already up to date, please
send the following data and any information you think might be
pertinent to <config-patches@gnu.org> in order to provide the needed
information to handle your system.

config.guess timestamp = 2007-05-17

uname -m = aarch64
uname -r = 5.15.0-58-generic
uname -s = Linux
uname -v = #64-Ubuntu SMP Thu Jan 5 12:06:43 UTC 2023

/usr/bin/uname -p = aarch64
/bin/uname -X     = 

hostinfo               = 
/bin/universe          = 
/usr/bin/arch -k       = 
/bin/arch              = aarch64
/usr/bin/oslevel       = 
/usr/convex/getsysinfo = 

UNAME_MACHINE = aarch64
UNAME_RELEASE = 5.15.0-58-generic
UNAME_SYSTEM  = Linux
UNAME_VERSION = #64-Ubuntu SMP Thu Jan 5 12:06:43 UTC 2023
configure: error: cannot guess build type; you must specify one
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
make[1]: Entering directory '/home/biocbuild/bbs-3.17-bioc/meat/lpsymphony/src/SYMPHONY'
make[1]: *** No targets specified and no makefile found.  Stop.
make[1]: Leaving directory '/home/biocbuild/bbs-3.17-bioc/meat/lpsymphony/src/SYMPHONY'
make: *** [Makevars:13: SYMPHONY.ts] Error 2
ERROR: compilation failed for package ‘lpsymphony’
* removing ‘/home/biocbuild/bbs-3.17-bioc/R/library/lpsymphony’