| Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-02-08 01:15:18 -0000 (Wed, 08 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4164 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the nullranges package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/nullranges.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1358/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| nullranges 1.5.13 (landing page) Michael Love
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | ERROR | skipped | |||||||||
| Package: nullranges |
| Version: 1.5.13 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data nullranges |
| StartedAt: 2023-02-06 11:32:57 -0000 (Mon, 06 Feb 2023) |
| EndedAt: 2023-02-06 11:36:30 -0000 (Mon, 06 Feb 2023) |
| EllapsedTime: 213.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data nullranges
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* checking for file ‘nullranges/DESCRIPTION’ ... OK
* preparing ‘nullranges’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘bootRanges.Rmd’ using rmarkdown
Quitting from lines 615-616 (bootRanges.Rmd)
Error: processing vignette 'bootRanges.Rmd' failed with diagnostics:
Cannot create zero-length unit vector ("unit" subsetting)
--- failed re-building ‘bootRanges.Rmd’
--- re-building ‘matchRanges.Rmd’ using rmarkdown
Quitting from lines 42-218 (matchRanges.Rmd)
Error: processing vignette 'matchRanges.Rmd' failed with diagnostics:
cannot mtfrm
--- failed re-building ‘matchRanges.Rmd’
--- re-building ‘matching_ginteractions.Rmd’ using rmarkdown
Quitting from lines 58-195 (matching_ginteractions.Rmd)
Error: processing vignette 'matching_ginteractions.Rmd' failed with diagnostics:
cannot mtfrm
--- failed re-building ‘matching_ginteractions.Rmd’
--- re-building ‘matching_granges.Rmd’ using rmarkdown
Quitting from lines 49-195 (matching_granges.Rmd)
Error: processing vignette 'matching_granges.Rmd' failed with diagnostics:
cannot mtfrm
--- failed re-building ‘matching_granges.Rmd’
--- re-building ‘matching_pool_set.Rmd’ using rmarkdown
--- finished re-building ‘matching_pool_set.Rmd’
--- re-building ‘nullranges.Rmd’ using rmarkdown
--- finished re-building ‘nullranges.Rmd’
SUMMARY: processing the following files failed:
‘bootRanges.Rmd’ ‘matchRanges.Rmd’ ‘matching_ginteractions.Rmd’
‘matching_granges.Rmd’
Error: Vignette re-building failed.
Execution halted