This page was generated on 2023-02-08 01:15:20 -0000 (Wed, 08 Feb 2023).
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data pkgDepTools
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* checking for file ‘pkgDepTools/DESCRIPTION’ ... OK
* preparing ‘pkgDepTools’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘pkgDepTools.Rnw’ using Sweave
Loading required package: graph
Loading required package: BiocGenerics
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:stats’:
IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm,
append, as.data.frame, basename, cbind, colnames, dirname,
do.call, duplicated, eval, evalq, get, grep, grepl,
intersect, is.unsorted, lapply, mapply, match, mget, order,
paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
rownames, sapply, setdiff, sort, table, tapply, union,
unique, unsplit, which.max, which.min
Loading required package: RBGL
Warning: Package 'pkgDepTools' is deprecated and will be removed from
Bioconductor version 3.18
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages
'citation("pkgname")'.
Loading required package: grid
Warning in .local(from, to, graph) :
edges replaced: ‘IFAA|mathjaxr’, ‘NA|doRNG’, ‘NA|foreach’, ‘NA|Matrix’, ‘NA|HDCI’, ‘NA|parallel’, ‘NA|doParallel’, ‘NA|parallelly’, ‘NA|glmnet’, ‘NA|stats’, ‘NA|utils’, ‘NA|SummarizedExperiment’, ‘NA|stringr’, ‘NA|S4Vectors’, ‘NA|DescTools’, ‘NA|MatrixExtra’, ‘NA|methods’
Warning in .local(from, to, graph) :
edges replaced: ‘NA|ggplot2’, ‘NA|ggside’, ‘NA|stats’, ‘NA|stringr’
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