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This page was generated on 2023-02-08 01:15:25 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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INSTALL results for rhdf5client on kunpeng1


To the developers/maintainers of the rhdf5client package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rhdf5client.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 1659/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rhdf5client 1.21.2  (landing page)
Vincent Carey
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/rhdf5client
git_branch: master
git_last_commit: e780769
git_last_commit_date: 2023-01-10 17:11:58 -0000 (Tue, 10 Jan 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    OK    OK  

Summary

Package: rhdf5client
Version: 1.21.2
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL rhdf5client
StartedAt: 2023-02-06 02:07:08 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 02:07:28 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 19.8 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL rhdf5client
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘rhdf5client’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c extract.c -o extract.o
extract.c: In function ‘extractBin’:
extract.c:101:42: warning: ‘rdp’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
      |                                          ^
extract.c:101:52: warning: ‘rip’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
      |                                                    ^
gcc -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o rhdf5client.so extract.o -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-rhdf5client/00new/rhdf5client/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rhdf5client)