Back to Build/check report for BioC 3.17
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2023-02-08 01:15:31 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for swfdr on kunpeng1


To the developers/maintainers of the swfdr package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/swfdr.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1991/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
swfdr 1.25.0  (landing page)
Simina M. Boca , Jeffrey T. Leek
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/swfdr
git_branch: master
git_last_commit: 4751410
git_last_commit_date: 2022-11-01 15:15:11 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: swfdr
Version: 1.25.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data swfdr
StartedAt: 2023-02-06 15:31:55 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 15:33:12 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 77.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data swfdr
###
##############################################################################
##############################################################################


* checking for file ‘swfdr/DESCRIPTION’ ... OK
* preparing ‘swfdr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘swfdrQ.Rmd’ using rmarkdown
! LaTeX Error: Environment cslreferences undefined.

Error: processing vignette 'swfdrQ.Rmd' failed with diagnostics:
LaTeX failed to compile /tmp/RtmpNM3V9g/Rbuild1838de5503d041/swfdr/vignettes/swfdrQ.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See swfdrQ.log for more info.
--- failed re-building ‘swfdrQ.Rmd’

--- re-building ‘swfdrTutorial.Rmd’ using rmarkdown
! LaTeX Error: Environment cslreferences undefined.

Error: processing vignette 'swfdrTutorial.Rmd' failed with diagnostics:
LaTeX failed to compile /tmp/RtmpNM3V9g/Rbuild1838de5503d041/swfdr/vignettes/swfdrTutorial.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See swfdrTutorial.log for more info.
--- failed re-building ‘swfdrTutorial.Rmd’

SUMMARY: processing the following files failed:
  ‘swfdrQ.Rmd’ ‘swfdrTutorial.Rmd’

Error: Vignette re-building failed.
Execution halted