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This page was generated on 2023-02-08 01:15:33 -0000 (Wed, 08 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4164
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INSTALL results for trigger on kunpeng1


To the developers/maintainers of the trigger package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/trigger.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2079/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
trigger 1.45.0  (landing page)
John D. Storey
Snapshot Date: 2023-02-06 00:12:45 -0000 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/trigger
git_branch: master
git_last_commit: dde7c6c
git_last_commit_date: 2022-11-01 15:06:32 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    OK    OK  

Summary

Package: trigger
Version: 1.45.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL trigger
StartedAt: 2023-02-06 03:38:18 -0000 (Mon, 06 Feb 2023)
EndedAt: 2023-02-06 03:38:54 -0000 (Mon, 06 Feb 2023)
EllapsedTime: 35.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL trigger
###
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘trigger’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c trigger.c -o trigger.o
trigger.c: In function ‘mergeorder’:
trigger.c:25:20: warning: variable ‘n3’ set but not used [-Wunused-but-set-variable]
   25 | int i1,i2,i3,n1,n2,n3;
      |                    ^~
trigger.c: In function ‘sec_link_stat’:
trigger.c:81:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
   81 | int ntr, nct, i, j;
      |          ^~~
trigger.c: In function ‘sec_link_stat_x’:
trigger.c:153:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  153 | int ntr, nct, i, j, k, nk;
      |          ^~~
trigger.c: In function ‘condi_indep_stat’:
trigger.c:233:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  233 | int ntr, nct, i, j;
      |          ^~~
trigger.c: In function ‘condi_indep_stat_x’:
trigger.c:310:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  310 | int ntr, nct, i, j, k, nk;
      |          ^~~
trigger.c: In function ‘condi_indep_stat_rx’:
trigger.c:393:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  393 | int ntr, nct, i, j, k, nk;
      |          ^~~
gcc -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o trigger.so trigger.o -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-trigger/00new/trigger/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (trigger)