| Back to Build/check report for BioC 3.17 | 
  | 
This page was generated on 2023-02-08 01:15:33 -0000 (Wed, 08 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs | 
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4164 | 
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| 
To the developers/maintainers of the trigger package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/trigger.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page.  | 
| Package 2079/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| trigger 1.45.0  (landing page) John D. Storey 
  | kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
| Package: trigger | 
| Version: 1.45.0 | 
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL trigger | 
| StartedAt: 2023-02-06 03:38:18 -0000 (Mon, 06 Feb 2023) | 
| EndedAt: 2023-02-06 03:38:54 -0000 (Mon, 06 Feb 2023) | 
| EllapsedTime: 35.2 seconds | 
| RetCode: 0 | 
| Status: OK | 
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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL trigger
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘trigger’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c trigger.c -o trigger.o
trigger.c: In function ‘mergeorder’:
trigger.c:25:20: warning: variable ‘n3’ set but not used [-Wunused-but-set-variable]
   25 | int i1,i2,i3,n1,n2,n3;
      |                    ^~
trigger.c: In function ‘sec_link_stat’:
trigger.c:81:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
   81 | int ntr, nct, i, j;
      |          ^~~
trigger.c: In function ‘sec_link_stat_x’:
trigger.c:153:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  153 | int ntr, nct, i, j, k, nk;
      |          ^~~
trigger.c: In function ‘condi_indep_stat’:
trigger.c:233:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  233 | int ntr, nct, i, j;
      |          ^~~
trigger.c: In function ‘condi_indep_stat_x’:
trigger.c:310:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  310 | int ntr, nct, i, j, k, nk;
      |          ^~~
trigger.c: In function ‘condi_indep_stat_rx’:
trigger.c:393:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable]
  393 | int ntr, nct, i, j, k, nk;
      |          ^~~
gcc -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o trigger.so trigger.o -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-trigger/00new/trigger/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (trigger)