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This page was generated on 2023-02-23 01:34:01 -0000 (Thu, 23 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4245
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BUILD results for GEOmetadb on kunpeng1


To the developers/maintainers of the GEOmetadb package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GEOmetadb.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 790/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GEOmetadb 1.61.0  (landing page)
Jack Zhu
Snapshot Date: 2023-02-21 12:29:53 -0000 (Tue, 21 Feb 2023)
git_url: https://git.bioconductor.org/packages/GEOmetadb
git_branch: master
git_last_commit: 5b6aa2c
git_last_commit_date: 2022-11-01 15:03:47 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: GEOmetadb
Version: 1.61.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GEOmetadb
StartedAt: 2023-02-21 20:35:44 -0000 (Tue, 21 Feb 2023)
EndedAt: 2023-02-21 20:41:43 -0000 (Tue, 21 Feb 2023)
EllapsedTime: 359.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GEOmetadb
###
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* checking for file ‘GEOmetadb/DESCRIPTION’ ... OK
* preparing ‘GEOmetadb’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GEOmetadb.Rmd’ using rmarkdown
trying URL 'https://gbnci.cancer.gov/geo/GEOmetadb_demo.sqlite.gz'
Content type 'application/x-gzip' length 20889492 bytes (19.9 MB)
======================
downloaded 8.9 MB

Quitting from lines 88-97 (GEOmetadb.Rmd) 
Error: processing vignette 'GEOmetadb.Rmd' failed with diagnostics:
download from 'https://gbnci.cancer.gov/geo/GEOmetadb_demo.sqlite.gz' failed
--- failed re-building ‘GEOmetadb.Rmd’

SUMMARY: processing the following file failed:
  ‘GEOmetadb.Rmd’

Error: Vignette re-building failed.
Execution halted