Back to Build/check report for BioC 3.17 |
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This page was generated on 2023-02-23 01:34:04 -0000 (Thu, 23 Feb 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4245 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 914/2164 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.5.0 (landing page) Matineh Rahmatbakhsh
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz |
StartedAt: 2023-02-22 06:37:21 -0000 (Wed, 22 Feb 2023) |
EndedAt: 2023-02-22 06:54:27 -0000 (Wed, 22 Feb 2023) |
EllapsedTime: 1026.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck’ * using R Under development (unstable) (2023-01-14 r83615) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.1 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 38.651 0.600 39.254 corr_plot 38.229 0.432 38.664 FSmethod 37.752 0.440 38.193 pred_ensembel 18.779 0.537 17.000 getFASTA 1.018 0.024 10.678 enrichfindP 0.444 0.033 16.203 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 101.571740 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 98.834001 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 100.981251 iter 10 value 88.386635 iter 20 value 87.811543 final value 87.811469 converged Fitting Repeat 4 # weights: 103 initial value 99.588196 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 100.735100 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.192196 iter 10 value 92.920683 iter 20 value 92.486458 iter 30 value 92.484823 iter 40 value 92.447719 iter 50 value 92.202202 iter 60 value 92.200993 iter 60 value 92.200992 iter 60 value 92.200992 final value 92.200992 converged Fitting Repeat 2 # weights: 305 initial value 96.222479 final value 94.275362 converged Fitting Repeat 3 # weights: 305 initial value 103.743065 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 100.512394 final value 94.046703 converged Fitting Repeat 5 # weights: 305 initial value 98.991444 iter 10 value 88.994107 iter 20 value 87.076633 iter 30 value 86.949836 iter 40 value 86.947770 final value 86.947734 converged Fitting Repeat 1 # weights: 507 initial value 108.974470 iter 10 value 93.854267 final value 93.826305 converged Fitting Repeat 2 # weights: 507 initial value 100.209656 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 112.384236 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 108.518702 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 100.055230 final value 94.275362 converged Fitting Repeat 1 # weights: 103 initial value 100.563055 iter 10 value 94.297288 iter 20 value 88.868698 iter 30 value 87.797068 iter 40 value 87.757847 iter 50 value 87.419871 iter 60 value 87.212978 iter 70 value 87.138717 iter 80 value 87.125725 iter 90 value 86.242742 iter 100 value 85.718791 final value 85.718791 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 101.213863 iter 10 value 94.461974 iter 20 value 93.938016 iter 30 value 92.296694 iter 40 value 91.740624 iter 50 value 88.401166 iter 60 value 87.311303 iter 70 value 86.625616 iter 80 value 86.538606 iter 90 value 86.489591 iter 100 value 86.469682 final value 86.469682 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.479865 iter 10 value 94.544987 iter 20 value 93.679808 iter 30 value 88.800364 iter 40 value 87.853915 iter 50 value 87.373054 iter 60 value 87.221089 iter 70 value 87.198680 final value 87.198010 converged Fitting Repeat 4 # weights: 103 initial value 96.260124 iter 10 value 92.949345 iter 20 value 89.375204 iter 30 value 87.282011 iter 40 value 86.773499 iter 50 value 86.304893 iter 60 value 86.216654 iter 70 value 86.216323 final value 86.216321 converged Fitting Repeat 5 # weights: 103 initial value 105.392956 iter 10 value 94.493088 iter 20 value 94.168422 iter 30 value 88.813479 iter 40 value 87.164838 iter 50 value 86.590554 final value 86.589845 converged Fitting Repeat 1 # weights: 305 initial value 102.769695 iter 10 value 94.437410 iter 20 value 93.710065 iter 30 value 88.724988 iter 40 value 88.063998 iter 50 value 87.829467 iter 60 value 87.293216 iter 70 value 85.714890 iter 80 value 85.279405 iter 90 value 85.064952 iter 100 value 84.756903 final value 84.756903 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.861411 iter 10 value 94.160966 iter 20 value 88.444547 iter 30 value 88.129691 iter 40 value 87.315615 iter 50 value 86.291782 iter 60 value 86.139820 iter 70 value 85.790633 iter 80 value 85.045717 iter 90 value 84.154980 iter 100 value 84.061121 final value 84.061121 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 105.745263 iter 10 value 94.032435 iter 20 value 89.042782 iter 30 value 86.921239 iter 40 value 85.023991 iter 50 value 84.716805 iter 60 value 83.475549 iter 70 value 83.084795 iter 80 value 82.590008 iter 90 value 82.335427 iter 100 value 82.217530 final value 82.217530 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 115.190007 iter 10 value 94.398446 iter 20 value 88.883015 iter 30 value 88.387785 iter 40 value 87.187583 iter 50 value 85.094610 iter 60 value 84.125477 iter 70 value 83.640821 iter 80 value 83.556218 iter 90 value 83.509144 iter 100 value 83.482657 final value 83.482657 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.193506 iter 10 value 94.128830 iter 20 value 89.656715 iter 30 value 86.328998 iter 40 value 84.316583 iter 50 value 82.857158 iter 60 value 82.385415 iter 70 value 82.325540 iter 80 value 82.144945 iter 90 value 82.110187 iter 100 value 82.103273 final value 82.103273 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 112.377301 iter 10 value 94.468506 iter 20 value 91.808302 iter 30 value 86.624313 iter 40 value 84.226102 iter 50 value 83.457544 iter 60 value 83.394659 iter 70 value 83.293766 iter 80 value 83.199610 iter 90 value 83.170483 iter 100 value 83.107260 final value 83.107260 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 152.160425 iter 10 value 94.838579 iter 20 value 92.426052 iter 30 value 88.312001 iter 40 value 87.069343 iter 50 value 85.491652 iter 60 value 83.358767 iter 70 value 83.103039 iter 80 value 82.836945 iter 90 value 82.562857 iter 100 value 82.365174 final value 82.365174 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.710684 iter 10 value 94.179499 iter 20 value 90.738410 iter 30 value 88.820050 iter 40 value 86.449049 iter 50 value 85.025261 iter 60 value 84.393115 iter 70 value 84.227553 iter 80 value 84.174098 iter 90 value 84.032491 iter 100 value 83.870192 final value 83.870192 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 124.153615 iter 10 value 94.931585 iter 20 value 91.989587 iter 30 value 88.615513 iter 40 value 87.799942 iter 50 value 87.420124 iter 60 value 86.666994 iter 70 value 85.154779 iter 80 value 84.265863 iter 90 value 82.948417 iter 100 value 82.363949 final value 82.363949 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 123.004230 iter 10 value 94.450766 iter 20 value 93.612051 iter 30 value 87.258212 iter 40 value 86.286268 iter 50 value 84.826230 iter 60 value 83.492722 iter 70 value 83.273529 iter 80 value 83.050437 iter 90 value 82.753601 iter 100 value 82.561529 final value 82.561529 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.176658 final value 94.485603 converged Fitting Repeat 2 # weights: 103 initial value 101.852945 final value 94.485922 converged Fitting Repeat 3 # weights: 103 initial value 100.499675 final value 94.485760 converged Fitting Repeat 4 # weights: 103 initial value 103.174125 final value 94.485794 converged Fitting Repeat 5 # weights: 103 initial value 95.735853 iter 10 value 94.486051 final value 94.484216 converged Fitting Repeat 1 # weights: 305 initial value 105.207980 iter 10 value 94.316924 iter 20 value 94.312389 iter 30 value 86.721895 iter 40 value 86.039805 iter 50 value 86.037895 iter 60 value 86.004595 iter 70 value 85.992422 iter 80 value 85.989481 iter 90 value 85.970994 iter 100 value 85.909706 final value 85.909706 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 95.788723 iter 10 value 89.546593 iter 20 value 89.500308 iter 30 value 89.498013 iter 40 value 89.287849 iter 50 value 88.742033 iter 60 value 87.026598 iter 70 value 86.965663 final value 86.965347 converged Fitting Repeat 3 # weights: 305 initial value 101.271569 iter 10 value 94.280276 iter 20 value 94.275851 final value 94.275758 converged Fitting Repeat 4 # weights: 305 initial value 103.308403 iter 10 value 94.280406 iter 20 value 94.276616 iter 30 value 94.273711 iter 40 value 87.322178 iter 50 value 87.321050 iter 60 value 87.320738 iter 70 value 87.184960 final value 87.037640 converged Fitting Repeat 5 # weights: 305 initial value 105.805234 iter 10 value 94.489372 iter 20 value 94.368497 iter 30 value 94.105538 final value 94.105350 converged Fitting Repeat 1 # weights: 507 initial value 105.850226 iter 10 value 94.492519 iter 20 value 94.438411 iter 30 value 92.951323 iter 40 value 91.465200 iter 50 value 91.445620 iter 60 value 91.262111 iter 70 value 91.172183 iter 80 value 91.147489 final value 91.146955 converged Fitting Repeat 2 # weights: 507 initial value 113.414078 iter 10 value 94.283717 iter 20 value 94.282710 iter 30 value 94.281610 iter 40 value 94.047664 iter 50 value 88.428403 iter 60 value 88.338194 iter 70 value 88.092456 final value 88.092243 converged Fitting Repeat 3 # weights: 507 initial value 128.896007 iter 10 value 94.492219 iter 20 value 87.985429 iter 30 value 87.540673 iter 40 value 87.424590 iter 50 value 87.074863 iter 60 value 87.072424 final value 87.070591 converged Fitting Repeat 4 # weights: 507 initial value 113.232585 iter 10 value 94.491610 iter 20 value 94.484123 iter 30 value 90.587109 iter 40 value 89.352528 iter 50 value 89.031813 iter 60 value 88.975649 iter 70 value 88.967700 iter 80 value 88.966987 iter 90 value 88.959087 iter 100 value 87.706043 final value 87.706043 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 99.563206 iter 10 value 94.283116 iter 20 value 94.275092 iter 30 value 86.821682 iter 40 value 85.811811 iter 50 value 85.529278 iter 60 value 85.528278 final value 85.528265 converged Fitting Repeat 1 # weights: 103 initial value 95.891493 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 110.345512 iter 10 value 94.469326 iter 20 value 94.443244 final value 94.443243 converged Fitting Repeat 3 # weights: 103 initial value 107.592542 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 101.591661 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.626537 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 99.993262 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 117.819425 final value 94.443243 converged Fitting Repeat 3 # weights: 305 initial value 100.734842 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.886474 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 95.712819 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 104.425553 final value 94.427726 converged Fitting Repeat 2 # weights: 507 initial value 107.265627 iter 10 value 92.237088 iter 20 value 86.017107 final value 86.017102 converged Fitting Repeat 3 # weights: 507 initial value 99.284809 iter 10 value 91.756776 iter 20 value 89.801983 final value 89.800030 converged Fitting Repeat 4 # weights: 507 initial value 125.040175 final value 94.443244 converged Fitting Repeat 5 # weights: 507 initial value 130.221406 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 102.221086 iter 10 value 94.482984 iter 20 value 90.731996 iter 30 value 82.982005 iter 40 value 82.818195 iter 50 value 82.576359 iter 60 value 82.457253 iter 70 value 82.426151 final value 82.420440 converged Fitting Repeat 2 # weights: 103 initial value 108.935748 iter 10 value 94.487803 iter 20 value 90.235558 iter 30 value 84.037768 iter 40 value 82.926045 iter 50 value 82.618226 iter 60 value 82.491032 iter 70 value 82.413391 final value 82.411529 converged Fitting Repeat 3 # weights: 103 initial value 101.917571 iter 10 value 92.953090 iter 20 value 83.510609 iter 30 value 82.574139 iter 40 value 82.433468 iter 50 value 82.411569 final value 82.411529 converged Fitting Repeat 4 # weights: 103 initial value 101.017245 iter 10 value 93.780243 iter 20 value 84.365100 iter 30 value 82.351646 iter 40 value 82.092894 final value 82.088146 converged Fitting Repeat 5 # weights: 103 initial value 96.299540 iter 10 value 93.837600 iter 20 value 91.342898 iter 30 value 89.821669 iter 40 value 88.735847 iter 50 value 87.184062 iter 60 value 84.333723 iter 70 value 83.834238 iter 80 value 82.476148 iter 90 value 82.421495 final value 82.421473 converged Fitting Repeat 1 # weights: 305 initial value 113.410545 iter 10 value 94.419560 iter 20 value 84.224582 iter 30 value 83.686159 iter 40 value 81.987107 iter 50 value 80.918603 iter 60 value 80.653984 iter 70 value 80.605646 iter 80 value 80.412431 iter 90 value 80.172913 iter 100 value 80.032486 final value 80.032486 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.301728 iter 10 value 93.250062 iter 20 value 92.001875 iter 30 value 91.081438 iter 40 value 88.151203 iter 50 value 83.003398 iter 60 value 81.400082 iter 70 value 79.291195 iter 80 value 78.560411 iter 90 value 78.319409 iter 100 value 78.192855 final value 78.192855 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.182159 iter 10 value 94.791704 iter 20 value 89.562638 iter 30 value 84.789736 iter 40 value 83.288642 iter 50 value 82.848219 iter 60 value 79.846494 iter 70 value 79.309744 iter 80 value 79.142769 iter 90 value 78.975514 iter 100 value 78.753897 final value 78.753897 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 120.050715 iter 10 value 93.104062 iter 20 value 86.270887 iter 30 value 83.483649 iter 40 value 82.040737 iter 50 value 81.789110 iter 60 value 81.660438 iter 70 value 81.439703 iter 80 value 79.798485 iter 90 value 78.808411 iter 100 value 78.649043 final value 78.649043 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.853920 iter 10 value 94.340269 iter 20 value 87.047253 iter 30 value 82.003946 iter 40 value 80.181382 iter 50 value 79.414788 iter 60 value 79.289025 iter 70 value 79.261567 iter 80 value 78.686680 iter 90 value 78.623465 iter 100 value 78.407081 final value 78.407081 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.970095 iter 10 value 94.520834 iter 20 value 91.093636 iter 30 value 86.137444 iter 40 value 83.859056 iter 50 value 82.474249 iter 60 value 81.881090 iter 70 value 81.707442 iter 80 value 81.402927 iter 90 value 81.222900 iter 100 value 79.740619 final value 79.740619 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 116.403822 iter 10 value 94.283633 iter 20 value 84.943189 iter 30 value 83.091585 iter 40 value 82.385244 iter 50 value 80.831624 iter 60 value 80.108186 iter 70 value 79.703384 iter 80 value 79.601920 iter 90 value 79.229279 iter 100 value 78.808634 final value 78.808634 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 116.343326 iter 10 value 94.457720 iter 20 value 94.244819 iter 30 value 88.737735 iter 40 value 82.970681 iter 50 value 79.790397 iter 60 value 78.512479 iter 70 value 78.139074 iter 80 value 78.100569 iter 90 value 78.070294 iter 100 value 78.039620 final value 78.039620 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 139.550161 iter 10 value 95.986829 iter 20 value 86.671202 iter 30 value 81.423041 iter 40 value 80.072543 iter 50 value 79.066399 iter 60 value 78.642254 iter 70 value 78.039997 iter 80 value 77.759165 iter 90 value 77.685279 iter 100 value 77.562814 final value 77.562814 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.455973 iter 10 value 94.951812 iter 20 value 94.452244 iter 30 value 92.273865 iter 40 value 90.008463 iter 50 value 89.562384 iter 60 value 89.107161 iter 70 value 86.000003 iter 80 value 82.120134 iter 90 value 80.947852 iter 100 value 80.624808 final value 80.624808 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.120662 final value 94.485961 converged Fitting Repeat 2 # weights: 103 initial value 95.056312 final value 94.485676 converged Fitting Repeat 3 # weights: 103 initial value 99.292968 final value 94.485945 converged Fitting Repeat 4 # weights: 103 initial value 107.255676 final value 94.485826 converged Fitting Repeat 5 # weights: 103 initial value 90.209374 iter 10 value 84.006385 iter 20 value 81.132248 iter 30 value 81.126759 iter 40 value 81.125600 iter 50 value 81.124052 iter 60 value 80.956737 iter 70 value 80.791469 iter 70 value 80.791469 iter 70 value 80.791469 final value 80.791469 converged Fitting Repeat 1 # weights: 305 initial value 98.364911 iter 10 value 94.487647 iter 20 value 94.476901 iter 30 value 88.865306 final value 83.265483 converged Fitting Repeat 2 # weights: 305 initial value 95.237250 iter 10 value 94.448089 iter 20 value 94.444016 iter 30 value 82.079935 iter 40 value 80.041257 iter 50 value 79.980650 iter 60 value 79.957886 iter 70 value 79.224874 iter 80 value 79.049980 iter 90 value 78.101405 iter 100 value 77.576724 final value 77.576724 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.198648 iter 10 value 94.448304 iter 20 value 94.267257 iter 30 value 92.743711 iter 40 value 84.066317 iter 50 value 82.477836 iter 60 value 82.301521 iter 70 value 82.266687 iter 80 value 82.175194 iter 90 value 78.130124 iter 100 value 77.912955 final value 77.912955 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 109.470978 iter 10 value 94.448087 iter 20 value 94.424962 iter 30 value 85.422717 iter 40 value 81.135346 iter 50 value 81.126283 final value 81.126136 converged Fitting Repeat 5 # weights: 305 initial value 97.324716 iter 10 value 94.447863 iter 20 value 94.439816 iter 30 value 94.254754 final value 94.254731 converged Fitting Repeat 1 # weights: 507 initial value 101.216008 iter 10 value 94.452006 iter 20 value 94.428439 iter 30 value 90.246381 iter 40 value 90.221908 final value 90.220821 converged Fitting Repeat 2 # weights: 507 initial value 110.295265 iter 10 value 94.469455 iter 20 value 94.463922 iter 30 value 93.691265 iter 40 value 93.653647 iter 50 value 93.291035 iter 60 value 92.929243 iter 70 value 92.784121 iter 80 value 92.528820 iter 90 value 89.333674 iter 100 value 83.784626 final value 83.784626 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 98.138426 iter 10 value 86.643233 iter 20 value 86.632934 iter 30 value 86.626091 iter 30 value 86.626090 iter 40 value 86.625510 iter 50 value 83.119815 iter 60 value 81.196686 iter 70 value 80.981899 iter 80 value 80.981644 iter 90 value 80.948418 iter 100 value 80.940061 final value 80.940061 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.736313 final value 94.492839 converged Fitting Repeat 5 # weights: 507 initial value 103.441489 iter 10 value 94.492672 iter 20 value 94.384393 iter 30 value 86.253885 iter 40 value 85.714195 iter 50 value 84.119928 iter 60 value 82.648423 iter 70 value 82.370752 iter 80 value 82.365264 iter 90 value 82.354714 iter 100 value 81.732827 final value 81.732827 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.484601 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 107.882457 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 95.443709 iter 10 value 91.506173 iter 10 value 91.506173 iter 10 value 91.506173 final value 91.506173 converged Fitting Repeat 4 # weights: 103 initial value 95.003324 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 102.520085 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 95.437672 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 95.850833 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 103.077307 iter 10 value 91.770094 iter 20 value 81.812759 final value 81.772829 converged Fitting Repeat 4 # weights: 305 initial value 108.049814 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 111.389471 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 115.544067 iter 10 value 93.289015 iter 20 value 93.274358 iter 30 value 93.180233 iter 30 value 93.180233 iter 30 value 93.180233 final value 93.180233 converged Fitting Repeat 2 # weights: 507 initial value 97.730067 iter 10 value 93.569540 iter 20 value 93.511304 final value 93.511111 converged Fitting Repeat 3 # weights: 507 initial value 101.745102 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 97.648121 final value 93.915746 converged Fitting Repeat 5 # weights: 507 initial value 97.917010 iter 10 value 94.010012 iter 20 value 85.937218 iter 30 value 84.379093 iter 40 value 84.084267 iter 50 value 84.059806 iter 60 value 84.059248 iter 60 value 84.059248 final value 84.059248 converged Fitting Repeat 1 # weights: 103 initial value 104.623351 iter 10 value 92.639690 iter 20 value 86.439093 iter 30 value 83.807248 iter 40 value 83.135319 iter 50 value 82.163815 iter 60 value 81.100160 iter 70 value 81.072152 final value 81.072110 converged Fitting Repeat 2 # weights: 103 initial value 98.717131 iter 10 value 94.058235 iter 20 value 89.382791 iter 30 value 83.806027 iter 40 value 82.172474 iter 50 value 81.648829 iter 60 value 81.198398 iter 70 value 80.980736 final value 80.965992 converged Fitting Repeat 3 # weights: 103 initial value 105.234223 iter 10 value 94.085070 iter 20 value 88.485632 iter 30 value 83.385510 iter 40 value 82.967709 iter 50 value 82.758020 iter 60 value 82.190085 iter 70 value 81.702099 iter 80 value 81.464733 iter 90 value 81.200658 iter 100 value 81.081072 final value 81.081072 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 97.314368 iter 10 value 94.057268 iter 20 value 92.625414 iter 30 value 85.981865 iter 40 value 85.199702 iter 50 value 82.394067 iter 60 value 81.600335 iter 70 value 80.987813 iter 80 value 80.586065 iter 90 value 80.580598 final value 80.577838 converged Fitting Repeat 5 # weights: 103 initial value 98.922777 iter 10 value 94.056693 iter 20 value 92.271113 iter 30 value 82.761061 iter 40 value 82.336280 iter 50 value 81.730713 iter 60 value 81.277656 iter 70 value 81.100220 iter 80 value 81.076658 final value 81.072110 converged Fitting Repeat 1 # weights: 305 initial value 102.302275 iter 10 value 93.742861 iter 20 value 83.827823 iter 30 value 82.453205 iter 40 value 81.582217 iter 50 value 81.456572 iter 60 value 81.177261 iter 70 value 80.923992 iter 80 value 80.905258 iter 90 value 80.727815 iter 100 value 79.842240 final value 79.842240 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 118.519601 iter 10 value 94.416647 iter 20 value 93.959457 iter 30 value 87.090215 iter 40 value 86.438539 iter 50 value 80.909346 iter 60 value 78.177208 iter 70 value 78.043420 iter 80 value 77.864638 iter 90 value 77.803889 iter 100 value 77.532739 final value 77.532739 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 119.843966 iter 10 value 93.507272 iter 20 value 86.066695 iter 30 value 85.700989 iter 40 value 85.059473 iter 50 value 82.846764 iter 60 value 79.382558 iter 70 value 78.441977 iter 80 value 78.175687 iter 90 value 78.041022 iter 100 value 77.933717 final value 77.933717 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 109.706987 iter 10 value 94.050105 iter 20 value 82.205554 iter 30 value 80.190396 iter 40 value 79.352964 iter 50 value 78.323100 iter 60 value 78.225024 iter 70 value 77.722529 iter 80 value 77.560376 iter 90 value 77.490024 iter 100 value 77.398057 final value 77.398057 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.953226 iter 10 value 94.249873 iter 20 value 93.838596 iter 30 value 91.237796 iter 40 value 85.943647 iter 50 value 84.819736 iter 60 value 84.221006 iter 70 value 80.596315 iter 80 value 79.175670 iter 90 value 78.763086 iter 100 value 78.162292 final value 78.162292 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 119.071434 iter 10 value 94.994947 iter 20 value 89.754114 iter 30 value 85.716564 iter 40 value 82.883740 iter 50 value 80.675146 iter 60 value 79.360214 iter 70 value 78.408786 iter 80 value 77.700697 iter 90 value 77.514553 iter 100 value 77.120435 final value 77.120435 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.482229 iter 10 value 94.078250 iter 20 value 89.004188 iter 30 value 88.256287 iter 40 value 85.212350 iter 50 value 83.208706 iter 60 value 82.171315 iter 70 value 81.252395 iter 80 value 79.254846 iter 90 value 78.087014 iter 100 value 77.685281 final value 77.685281 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 116.337962 iter 10 value 94.039436 iter 20 value 93.414016 iter 30 value 86.913732 iter 40 value 86.488494 iter 50 value 86.169606 iter 60 value 84.539712 iter 70 value 81.575173 iter 80 value 79.069039 iter 90 value 78.350635 iter 100 value 78.024821 final value 78.024821 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.364242 iter 10 value 100.021634 iter 20 value 87.047548 iter 30 value 85.205330 iter 40 value 83.740781 iter 50 value 83.351035 iter 60 value 82.333956 iter 70 value 80.982431 iter 80 value 80.050748 iter 90 value 79.756935 iter 100 value 79.701858 final value 79.701858 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 113.386718 iter 10 value 94.133978 iter 20 value 85.143799 iter 30 value 83.948373 iter 40 value 83.020812 iter 50 value 82.649401 iter 60 value 81.961396 iter 70 value 80.957415 iter 80 value 79.989828 iter 90 value 79.294702 iter 100 value 79.198532 final value 79.198532 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.276429 final value 93.917644 converged Fitting Repeat 2 # weights: 103 initial value 95.324971 final value 94.054427 converged Fitting Repeat 3 # weights: 103 initial value 97.444071 final value 94.054585 converged Fitting Repeat 4 # weights: 103 initial value 104.023742 final value 94.054277 converged Fitting Repeat 5 # weights: 103 initial value 101.708522 final value 94.054642 converged Fitting Repeat 1 # weights: 305 initial value 98.595808 iter 10 value 94.057576 iter 20 value 94.050568 iter 30 value 93.645035 iter 40 value 93.126954 iter 50 value 81.833392 iter 60 value 81.286934 final value 81.282599 converged Fitting Repeat 2 # weights: 305 initial value 100.635714 iter 10 value 94.056671 iter 20 value 93.944039 final value 93.944004 converged Fitting Repeat 3 # weights: 305 initial value 97.962329 iter 10 value 94.057953 iter 20 value 94.052966 iter 30 value 86.693889 iter 40 value 85.288321 iter 50 value 85.180188 iter 60 value 85.171997 final value 85.171961 converged Fitting Repeat 4 # weights: 305 initial value 109.629166 iter 10 value 94.057632 iter 20 value 94.052944 iter 30 value 92.996628 iter 40 value 83.016011 iter 50 value 82.365835 iter 60 value 82.218515 iter 70 value 81.915396 iter 80 value 81.908433 iter 90 value 81.903600 final value 81.903542 converged Fitting Repeat 5 # weights: 305 initial value 99.523270 iter 10 value 93.920916 iter 20 value 93.916436 iter 30 value 84.527418 final value 84.526122 converged Fitting Repeat 1 # weights: 507 initial value 95.136202 iter 10 value 93.612707 iter 20 value 93.605268 iter 30 value 92.009419 iter 40 value 82.545959 iter 50 value 81.914218 iter 60 value 81.856560 iter 70 value 81.830842 iter 80 value 81.828127 iter 90 value 81.771100 iter 100 value 80.534092 final value 80.534092 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 128.710241 iter 10 value 94.061991 iter 20 value 94.001462 iter 30 value 93.487897 iter 40 value 86.552874 iter 50 value 86.179885 iter 60 value 86.179749 iter 70 value 86.171719 iter 80 value 85.816459 iter 90 value 85.487548 final value 85.486103 converged Fitting Repeat 3 # weights: 507 initial value 109.710398 iter 10 value 87.914564 iter 20 value 82.636764 iter 30 value 82.620201 iter 40 value 81.955751 iter 50 value 81.863275 iter 60 value 81.567421 iter 70 value 81.560294 iter 80 value 81.528128 iter 90 value 80.965563 iter 100 value 80.620809 final value 80.620809 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.421562 iter 10 value 93.296840 iter 20 value 93.290656 iter 30 value 93.290314 final value 93.290281 converged Fitting Repeat 5 # weights: 507 initial value 105.084588 iter 10 value 93.555745 iter 20 value 93.529125 iter 30 value 92.876123 iter 40 value 85.641239 iter 50 value 85.274365 iter 60 value 85.206079 iter 70 value 85.205124 iter 80 value 84.544800 iter 90 value 84.541998 iter 100 value 83.844038 final value 83.844038 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 108.329105 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 100.827711 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 108.143284 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 95.595060 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 100.221786 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.131927 iter 10 value 94.443183 iter 10 value 94.443182 iter 10 value 94.443182 final value 94.443182 converged Fitting Repeat 2 # weights: 305 initial value 103.276748 final value 94.467391 converged Fitting Repeat 3 # weights: 305 initial value 111.838229 final value 94.467391 converged Fitting Repeat 4 # weights: 305 initial value 105.842063 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 96.349995 iter 10 value 94.325203 final value 94.275364 converged Fitting Repeat 1 # weights: 507 initial value 106.747646 final value 94.275362 converged Fitting Repeat 2 # weights: 507 initial value 100.286316 iter 10 value 94.147546 iter 20 value 94.114681 final value 94.103916 converged Fitting Repeat 3 # weights: 507 initial value 113.626887 final value 94.461538 converged Fitting Repeat 4 # weights: 507 initial value 122.014563 iter 10 value 94.467618 final value 94.467391 converged Fitting Repeat 5 # weights: 507 initial value 114.932945 iter 10 value 90.989392 iter 20 value 89.717109 iter 30 value 89.715372 final value 89.715368 converged Fitting Repeat 1 # weights: 103 initial value 97.424194 iter 10 value 94.204554 iter 20 value 88.718257 iter 30 value 88.394535 iter 40 value 86.696332 iter 50 value 85.440333 iter 60 value 85.172085 iter 70 value 84.836511 iter 80 value 84.731395 iter 90 value 84.721714 final value 84.719501 converged Fitting Repeat 2 # weights: 103 initial value 109.333838 iter 10 value 94.497933 iter 20 value 94.486486 iter 30 value 91.026927 iter 40 value 89.384285 iter 50 value 89.030622 iter 60 value 87.923136 iter 70 value 87.294592 iter 80 value 87.173656 final value 87.152998 converged Fitting Repeat 3 # weights: 103 initial value 102.058501 iter 10 value 94.489400 iter 20 value 94.483207 iter 30 value 90.379405 iter 40 value 89.752847 iter 50 value 88.644212 iter 60 value 86.776288 iter 70 value 86.542128 iter 80 value 86.437729 iter 90 value 86.354715 iter 100 value 86.250952 final value 86.250952 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 99.966155 final value 94.488534 converged Fitting Repeat 5 # weights: 103 initial value 102.968927 iter 10 value 94.446397 iter 20 value 89.180107 iter 30 value 88.901884 iter 40 value 87.659918 iter 50 value 87.533244 iter 60 value 87.454136 iter 70 value 87.411519 final value 87.411322 converged Fitting Repeat 1 # weights: 305 initial value 103.623080 iter 10 value 92.340144 iter 20 value 88.982985 iter 30 value 88.475746 iter 40 value 86.640246 iter 50 value 86.462557 iter 60 value 85.895131 iter 70 value 85.347024 iter 80 value 84.991681 iter 90 value 84.928021 iter 100 value 84.924103 final value 84.924103 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 106.307562 iter 10 value 94.450269 iter 20 value 89.904315 iter 30 value 88.052944 iter 40 value 87.797262 iter 50 value 87.590043 iter 60 value 87.509669 iter 70 value 87.416718 iter 80 value 87.332749 iter 90 value 86.623315 iter 100 value 86.491611 final value 86.491611 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 114.803192 iter 10 value 93.718458 iter 20 value 87.843951 iter 30 value 87.375415 iter 40 value 86.079364 iter 50 value 85.378697 iter 60 value 84.534865 iter 70 value 84.303934 iter 80 value 83.983540 iter 90 value 83.900173 iter 100 value 83.840864 final value 83.840864 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.012978 iter 10 value 94.675917 iter 20 value 94.648416 iter 30 value 91.161205 iter 40 value 90.470033 iter 50 value 89.394905 iter 60 value 88.603185 iter 70 value 86.783800 iter 80 value 86.258929 iter 90 value 85.867762 iter 100 value 85.670702 final value 85.670702 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 112.461632 iter 10 value 96.665313 iter 20 value 94.851856 iter 30 value 89.411308 iter 40 value 88.318850 iter 50 value 88.059617 iter 60 value 87.092286 iter 70 value 85.473934 iter 80 value 85.264909 iter 90 value 85.080300 iter 100 value 84.387470 final value 84.387470 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 136.233906 iter 10 value 94.945924 iter 20 value 88.782017 iter 30 value 86.434630 iter 40 value 85.392142 iter 50 value 84.773165 iter 60 value 84.074893 iter 70 value 83.296665 iter 80 value 83.027144 iter 90 value 82.937439 iter 100 value 82.907670 final value 82.907670 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.797583 iter 10 value 94.528952 iter 20 value 94.336457 iter 30 value 92.069480 iter 40 value 89.740882 iter 50 value 89.304521 iter 60 value 87.971192 iter 70 value 86.037000 iter 80 value 85.337104 iter 90 value 84.944108 iter 100 value 84.751201 final value 84.751201 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 108.181661 iter 10 value 95.216413 iter 20 value 94.492750 iter 30 value 94.416029 iter 40 value 93.144826 iter 50 value 88.803176 iter 60 value 86.309185 iter 70 value 85.706268 iter 80 value 85.097258 iter 90 value 84.724380 iter 100 value 84.502403 final value 84.502403 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 103.915072 iter 10 value 94.375453 iter 20 value 91.977108 iter 30 value 91.104658 iter 40 value 88.289467 iter 50 value 86.066362 iter 60 value 85.316014 iter 70 value 84.472483 iter 80 value 84.029362 iter 90 value 83.831486 iter 100 value 83.685024 final value 83.685024 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.599161 iter 10 value 94.575325 iter 20 value 94.490268 iter 30 value 94.476200 iter 40 value 93.404686 iter 50 value 86.336695 iter 60 value 84.456177 iter 70 value 84.072220 iter 80 value 83.867467 iter 90 value 83.619543 iter 100 value 83.571668 final value 83.571668 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 108.154267 iter 10 value 94.486073 iter 20 value 94.484291 iter 30 value 93.306971 iter 40 value 88.958611 iter 50 value 88.941852 iter 60 value 88.940754 iter 70 value 88.651310 iter 80 value 88.647693 final value 88.647525 converged Fitting Repeat 2 # weights: 103 initial value 95.831450 final value 94.485929 converged Fitting Repeat 3 # weights: 103 initial value 101.526837 iter 10 value 94.485773 iter 20 value 94.484225 iter 30 value 94.172706 iter 40 value 90.969491 iter 50 value 87.964465 iter 60 value 87.913052 iter 70 value 87.903544 final value 87.903484 converged Fitting Repeat 4 # weights: 103 initial value 97.900311 iter 10 value 94.485898 final value 94.484207 converged Fitting Repeat 5 # weights: 103 initial value 97.313534 final value 94.485634 converged Fitting Repeat 1 # weights: 305 initial value 105.268164 iter 10 value 94.488990 iter 20 value 89.893219 iter 30 value 87.318510 iter 40 value 86.550965 iter 50 value 86.312570 iter 60 value 85.968829 iter 70 value 85.405475 iter 80 value 85.327442 iter 90 value 85.309364 iter 100 value 84.822661 final value 84.822661 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.761229 iter 10 value 94.471977 iter 20 value 94.467927 iter 30 value 94.462569 iter 40 value 93.371536 iter 50 value 89.664674 iter 60 value 88.082406 iter 70 value 87.136955 iter 80 value 87.131852 iter 90 value 87.129876 iter 100 value 87.127623 final value 87.127623 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 98.203470 iter 10 value 94.488941 iter 20 value 94.470443 final value 94.467425 converged Fitting Repeat 4 # weights: 305 initial value 103.345008 iter 10 value 94.489091 iter 20 value 94.484213 iter 30 value 94.419793 iter 40 value 92.436436 iter 50 value 92.292439 final value 92.290010 converged Fitting Repeat 5 # weights: 305 initial value 96.132584 iter 10 value 94.471583 iter 20 value 94.467781 final value 94.467522 converged Fitting Repeat 1 # weights: 507 initial value 103.363908 iter 10 value 94.492235 iter 20 value 94.448253 iter 30 value 93.392730 iter 40 value 89.764306 iter 50 value 89.316689 final value 89.311460 converged Fitting Repeat 2 # weights: 507 initial value 100.382529 iter 10 value 94.469504 iter 20 value 92.253161 iter 30 value 88.678774 iter 40 value 87.097918 iter 50 value 82.942404 iter 60 value 82.401193 iter 70 value 82.285962 iter 80 value 82.280536 iter 90 value 82.280303 iter 100 value 82.280038 final value 82.280038 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 123.039340 iter 10 value 94.492854 iter 20 value 94.477253 iter 30 value 94.443337 final value 94.443328 converged Fitting Repeat 4 # weights: 507 initial value 95.822799 iter 10 value 94.436023 iter 20 value 94.393880 iter 30 value 94.393146 iter 40 value 89.727368 iter 50 value 89.720261 iter 60 value 87.765067 final value 87.747931 converged Fitting Repeat 5 # weights: 507 initial value 109.863963 iter 10 value 94.492455 iter 20 value 94.165313 iter 30 value 90.821242 iter 40 value 90.241087 iter 50 value 89.171432 iter 60 value 89.101651 iter 70 value 88.673646 iter 80 value 88.613416 iter 90 value 88.609365 iter 100 value 88.043962 final value 88.043962 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 116.316640 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 95.816029 final value 93.653870 converged Fitting Repeat 3 # weights: 103 initial value 95.959669 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 96.556018 final value 93.410244 converged Fitting Repeat 5 # weights: 103 initial value 96.207341 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 97.962742 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 97.386000 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 122.548360 final value 93.582418 converged Fitting Repeat 4 # weights: 305 initial value 98.840757 iter 10 value 93.504815 iter 20 value 93.322366 iter 30 value 93.303065 final value 93.302943 converged Fitting Repeat 5 # weights: 305 initial value 96.201995 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 100.324221 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 101.197048 iter 10 value 93.069215 iter 20 value 92.062305 iter 30 value 90.429271 iter 40 value 89.684971 iter 50 value 87.940100 iter 60 value 84.467348 iter 70 value 84.295682 iter 80 value 84.225570 iter 90 value 84.220924 final value 84.220909 converged Fitting Repeat 3 # weights: 507 initial value 132.439471 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 100.161371 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 114.905147 final value 93.582418 converged Fitting Repeat 1 # weights: 103 initial value 97.711588 iter 10 value 94.054963 iter 20 value 93.631444 iter 30 value 93.438791 iter 40 value 93.357409 iter 50 value 87.512695 iter 60 value 87.107655 iter 70 value 83.014653 iter 80 value 82.313380 iter 90 value 82.197887 iter 100 value 82.087861 final value 82.087861 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 101.073950 iter 10 value 93.751503 iter 20 value 85.337071 iter 30 value 85.047747 iter 40 value 82.988072 iter 50 value 82.938793 final value 82.938693 converged Fitting Repeat 3 # weights: 103 initial value 98.613635 iter 10 value 94.058725 iter 20 value 93.853335 iter 30 value 91.293748 iter 40 value 88.498190 iter 50 value 87.394801 iter 60 value 86.639009 iter 70 value 86.427199 iter 80 value 83.507522 iter 90 value 80.544499 iter 100 value 80.149303 final value 80.149303 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 101.051082 iter 10 value 94.036470 iter 20 value 92.612349 iter 30 value 86.936682 iter 40 value 82.636028 iter 50 value 81.705728 iter 60 value 80.635878 iter 70 value 80.178863 iter 80 value 79.823495 iter 90 value 79.812122 final value 79.811342 converged Fitting Repeat 5 # weights: 103 initial value 97.381994 iter 10 value 93.501842 iter 20 value 91.844905 iter 30 value 82.710605 iter 40 value 82.072964 iter 50 value 81.911352 iter 60 value 80.457387 iter 70 value 79.944733 iter 80 value 79.811444 final value 79.811342 converged Fitting Repeat 1 # weights: 305 initial value 113.904569 iter 10 value 94.002255 iter 20 value 84.524303 iter 30 value 82.691770 iter 40 value 82.224734 iter 50 value 80.587160 iter 60 value 80.217603 iter 70 value 80.026651 iter 80 value 79.890556 iter 90 value 79.886895 iter 100 value 79.858416 final value 79.858416 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.276803 iter 10 value 93.914229 iter 20 value 90.009372 iter 30 value 86.357466 iter 40 value 83.952532 iter 50 value 81.283464 iter 60 value 80.513858 iter 70 value 80.256726 iter 80 value 80.033224 iter 90 value 79.820426 iter 100 value 79.781752 final value 79.781752 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.071332 iter 10 value 92.553666 iter 20 value 87.927072 iter 30 value 87.560391 iter 40 value 87.238458 iter 50 value 84.571633 iter 60 value 84.038462 iter 70 value 81.944532 iter 80 value 81.371837 iter 90 value 79.983742 iter 100 value 79.238073 final value 79.238073 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 122.154973 iter 10 value 94.528785 iter 20 value 85.913512 iter 30 value 84.559700 iter 40 value 84.004109 iter 50 value 83.914789 iter 60 value 83.544931 iter 70 value 83.095367 iter 80 value 82.888402 iter 90 value 82.219996 iter 100 value 80.158777 final value 80.158777 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.636927 iter 10 value 93.809524 iter 20 value 93.705206 iter 30 value 87.083175 iter 40 value 84.512469 iter 50 value 83.834874 iter 60 value 83.352234 iter 70 value 80.840327 iter 80 value 79.951908 iter 90 value 79.760955 iter 100 value 79.040493 final value 79.040493 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.222909 iter 10 value 93.930043 iter 20 value 88.037951 iter 30 value 87.211483 iter 40 value 82.077344 iter 50 value 80.130059 iter 60 value 79.803355 iter 70 value 79.185023 iter 80 value 78.533757 iter 90 value 78.341890 iter 100 value 78.289963 final value 78.289963 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 116.118288 iter 10 value 93.775684 iter 20 value 91.823624 iter 30 value 84.949562 iter 40 value 84.111352 iter 50 value 81.752770 iter 60 value 81.193213 iter 70 value 80.952323 iter 80 value 80.830825 iter 90 value 80.714260 iter 100 value 80.341584 final value 80.341584 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.961434 iter 10 value 91.096359 iter 20 value 84.789736 iter 30 value 80.966130 iter 40 value 80.353122 iter 50 value 79.486899 iter 60 value 79.226358 iter 70 value 79.158438 iter 80 value 79.045366 iter 90 value 78.937836 iter 100 value 78.892545 final value 78.892545 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 125.316977 iter 10 value 85.350438 iter 20 value 84.686523 iter 30 value 84.238853 iter 40 value 83.476849 iter 50 value 82.776958 iter 60 value 81.151156 iter 70 value 79.919226 iter 80 value 79.604758 iter 90 value 79.222647 iter 100 value 79.156076 final value 79.156076 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 125.195192 iter 10 value 94.036193 iter 20 value 92.044204 iter 30 value 87.047590 iter 40 value 83.664366 iter 50 value 81.030227 iter 60 value 79.909268 iter 70 value 79.493739 iter 80 value 79.103077 iter 90 value 78.909384 iter 100 value 78.656305 final value 78.656305 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.158392 final value 94.054551 converged Fitting Repeat 2 # weights: 103 initial value 98.068382 final value 94.054381 converged Fitting Repeat 3 # weights: 103 initial value 99.332149 iter 10 value 94.054501 iter 20 value 94.052824 iter 30 value 93.493755 iter 40 value 93.249924 final value 93.247547 converged Fitting Repeat 4 # weights: 103 initial value 100.714249 final value 94.054480 converged Fitting Repeat 5 # weights: 103 initial value 97.495194 final value 94.054448 converged Fitting Repeat 1 # weights: 305 initial value 104.160668 iter 10 value 94.063807 iter 20 value 94.058868 iter 30 value 89.847485 iter 40 value 84.694046 iter 50 value 82.815220 iter 60 value 82.747228 iter 70 value 82.745914 iter 80 value 82.745434 iter 90 value 82.298107 iter 100 value 81.653911 final value 81.653911 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 127.075250 iter 10 value 94.124246 iter 20 value 93.619993 iter 30 value 89.343315 iter 40 value 86.434378 iter 50 value 86.394287 iter 60 value 86.227100 iter 70 value 86.195632 iter 80 value 84.916792 iter 90 value 84.887388 iter 100 value 84.887180 final value 84.887180 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 97.520524 iter 10 value 94.056331 iter 20 value 87.809512 iter 30 value 86.927879 iter 40 value 86.910336 final value 86.910241 converged Fitting Repeat 4 # weights: 305 initial value 99.021478 iter 10 value 94.057907 iter 20 value 94.052933 iter 30 value 93.644667 iter 40 value 83.995729 iter 50 value 82.949565 iter 60 value 82.247938 iter 70 value 81.809571 final value 81.809568 converged Fitting Repeat 5 # weights: 305 initial value 107.159197 iter 10 value 94.057528 iter 20 value 93.386961 iter 30 value 93.256116 final value 93.247582 converged Fitting Repeat 1 # weights: 507 initial value 102.829208 iter 10 value 93.590382 iter 20 value 93.581902 iter 30 value 93.306288 iter 40 value 93.248131 final value 93.247835 converged Fitting Repeat 2 # weights: 507 initial value 99.453637 iter 10 value 86.770648 iter 20 value 81.406247 iter 30 value 80.892756 iter 40 value 80.682317 iter 50 value 80.668837 iter 60 value 80.648303 final value 80.646820 converged Fitting Repeat 3 # weights: 507 initial value 107.754385 iter 10 value 93.775794 iter 20 value 93.498232 iter 30 value 93.418978 iter 40 value 93.266900 iter 50 value 93.255839 final value 93.251699 converged Fitting Repeat 4 # weights: 507 initial value 114.417452 iter 10 value 88.548298 iter 20 value 83.541393 iter 30 value 82.875732 iter 40 value 82.874662 iter 50 value 82.870903 iter 60 value 82.764572 iter 70 value 82.624773 iter 80 value 82.415334 iter 90 value 82.408731 final value 82.408612 converged Fitting Repeat 5 # weights: 507 initial value 96.311457 iter 10 value 93.350011 iter 20 value 93.255940 iter 30 value 88.504040 iter 40 value 82.518739 iter 50 value 81.901503 iter 60 value 78.749572 iter 70 value 77.850454 iter 80 value 77.659793 iter 90 value 77.212572 iter 100 value 77.017050 final value 77.017050 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 118.484769 iter 10 value 117.199218 iter 20 value 117.196577 iter 30 value 112.709317 iter 40 value 106.557652 iter 50 value 105.074892 iter 60 value 105.070467 final value 105.069684 converged Fitting Repeat 2 # weights: 305 initial value 124.132203 iter 10 value 117.895000 iter 20 value 117.642641 iter 30 value 106.672525 iter 40 value 102.797274 iter 50 value 101.751005 iter 60 value 101.485612 iter 70 value 101.460422 iter 80 value 101.105860 final value 101.105761 converged Fitting Repeat 3 # weights: 305 initial value 144.499533 iter 10 value 117.895575 iter 20 value 117.664014 iter 30 value 115.616610 final value 115.616592 converged Fitting Repeat 4 # weights: 305 initial value 122.150151 iter 10 value 117.895915 iter 20 value 117.834716 iter 30 value 117.515002 iter 40 value 117.513214 iter 50 value 117.512160 iter 60 value 117.511392 iter 70 value 117.509826 iter 80 value 117.070670 iter 90 value 115.696042 iter 100 value 115.165379 final value 115.165379 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 127.203909 iter 10 value 117.894995 iter 20 value 117.890374 iter 30 value 112.591213 iter 40 value 107.006038 iter 50 value 107.005037 iter 60 value 106.693530 iter 70 value 103.609007 iter 80 value 101.615803 iter 90 value 100.693238 iter 100 value 99.940485 final value 99.940485 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Wed Feb 22 06:43:30 2023 *********************************************** Number of test functions: 8 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 8 test functions, 0 errors, 0 failures Number of test functions: 8 Number of errors: 0 Number of failures: 0 Warning messages: 1: The `.data` argument of `add_column()` must have unique names as of tibble 3.0.0. ℹ Use `.name_repair = "minimal"`. ℹ The deprecated feature was likely used in the tibble package. Please report the issue at <https://github.com/tidyverse/tibble/issues>. 2: `repeats` has no meaning for this resampling method. 3: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 52.751 1.519 98.714
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 37.752 | 0.440 | 38.193 | |
FreqInteractors | 0.281 | 0.008 | 0.290 | |
calculateAAC | 0.071 | 0.008 | 0.080 | |
calculateAutocor | 0.748 | 0.012 | 0.760 | |
calculateBE | 0.235 | 0.004 | 0.239 | |
calculateCTDC | 0.133 | 0.004 | 0.136 | |
calculateCTDD | 0.911 | 0.024 | 0.936 | |
calculateCTDT | 0.302 | 0.004 | 0.306 | |
calculateCTriad | 0.48 | 0.00 | 0.48 | |
calculateDC | 0.135 | 0.004 | 0.138 | |
calculateF | 0.686 | 0.008 | 0.693 | |
calculateKSAAP | 0.157 | 0.000 | 0.157 | |
calculateQD_Sm | 2.373 | 0.036 | 2.409 | |
calculateTC | 2.44 | 0.04 | 2.48 | |
calculateTC_Sm | 0.373 | 0.000 | 0.373 | |
corr_plot | 38.229 | 0.432 | 38.664 | |
enrichfindP | 0.444 | 0.033 | 16.203 | |
enrichfind_hp | 0.039 | 0.008 | 1.563 | |
enrichplot | 0.358 | 0.028 | 0.386 | |
filter_missing_values | 0.001 | 0.000 | 0.002 | |
getFASTA | 1.018 | 0.024 | 10.678 | |
getHPI | 0.000 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.001 | 0.000 | 0.002 | |
plotPPI | 0.074 | 0.008 | 0.082 | |
pred_ensembel | 18.779 | 0.537 | 17.000 | |
var_imp | 38.651 | 0.600 | 39.254 | |