Back to Build/check report for BioC 3.17:   simplified   long
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-02-27 02:34:33 -0000 (Mon, 27 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4259
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for EpiCompare on kunpeng1


To the developers/maintainers of the EpiCompare package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EpiCompare.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 608/2169HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EpiCompare 1.3.3  (landing page)
Sera Choi
Snapshot Date: 2023-02-23 09:40:21 -0000 (Thu, 23 Feb 2023)
git_url: https://git.bioconductor.org/packages/EpiCompare
git_branch: master
git_last_commit: e0f99c7
git_last_commit_date: 2023-02-23 01:07:51 -0000 (Thu, 23 Feb 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: EpiCompare
Version: 1.3.3
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EpiCompare
StartedAt: 2023-02-23 16:06:05 -0000 (Thu, 23 Feb 2023)
EndedAt: 2023-02-23 16:07:52 -0000 (Thu, 23 Feb 2023)
EllapsedTime: 107.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data EpiCompare
###
##############################################################################
##############################################################################


* checking for file ‘EpiCompare/DESCRIPTION’ ... OK
* preparing ‘EpiCompare’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘EpiCompare.Rmd’ using rmarkdown
[WARNING] This document format requires a nonempty <title> element.
  Defaulting to 'EpiCompare.knit' as the title.
  To specify a title, use 'title' in metadata or --metadata title="...".
--- finished re-building ‘EpiCompare.Rmd’

--- re-building ‘docker.Rmd’ using rmarkdown
--- finished re-building ‘docker.Rmd’

--- re-building ‘example_report.Rmd’ using rmarkdown
Quitting from lines 14-15 (example_report.Rmd) 
Error: processing vignette 'example_report.Rmd' failed with diagnostics:
cannot open the connection to 'https://github.com/neurogenomics/EpiCompare/raw/master/report/EpiCompare_example.html'
--- failed re-building ‘example_report.Rmd’

SUMMARY: processing the following file failed:
  ‘example_report.Rmd’

Error: Vignette re-building failed.
Execution halted