Back to Build/check report for BioC 3.17: simplified long |
|
This page was generated on 2023-02-27 02:34:35 -0000 (Mon, 27 Feb 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4259 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 914/2169 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.5.0 (landing page) Matineh Rahmatbakhsh
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz |
StartedAt: 2023-02-24 12:35:34 -0000 (Fri, 24 Feb 2023) |
EndedAt: 2023-02-24 12:51:45 -0000 (Fri, 24 Feb 2023) |
EllapsedTime: 970.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck’ * using R Under development (unstable) (2023-01-14 r83615) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.1 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 38.415 0.692 39.108 corr_plot 38.216 0.415 38.638 FSmethod 37.915 0.548 38.475 pred_ensembel 18.420 0.517 16.636 getFASTA 0.721 0.024 9.702 enrichfindP 0.407 0.057 15.516 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 95.106056 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 97.863277 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 97.858079 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.672524 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 100.899952 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 95.272685 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 95.107353 final value 93.582418 converged Fitting Repeat 3 # weights: 305 initial value 124.748809 iter 10 value 93.353684 iter 20 value 93.301806 final value 93.301233 converged Fitting Repeat 4 # weights: 305 initial value 107.913504 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 105.801093 final value 93.582418 converged Fitting Repeat 1 # weights: 507 initial value 95.518421 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 104.991632 final value 93.582418 converged Fitting Repeat 3 # weights: 507 initial value 109.015821 final value 93.582418 converged Fitting Repeat 4 # weights: 507 initial value 110.950097 iter 10 value 93.582423 final value 93.582418 converged Fitting Repeat 5 # weights: 507 initial value 96.914877 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 102.635982 iter 10 value 87.781512 iter 20 value 83.204306 iter 30 value 82.953612 iter 40 value 82.271983 iter 50 value 82.192194 iter 60 value 82.170883 iter 70 value 82.148930 iter 70 value 82.148930 iter 70 value 82.148930 final value 82.148930 converged Fitting Repeat 2 # weights: 103 initial value 104.000246 iter 10 value 94.017945 iter 20 value 87.631563 iter 30 value 85.720360 iter 40 value 83.607638 iter 50 value 81.529292 iter 60 value 81.180997 iter 70 value 80.622386 iter 80 value 80.458249 iter 90 value 80.373732 iter 100 value 80.326536 final value 80.326536 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.177917 iter 10 value 94.055127 iter 20 value 94.054596 iter 30 value 93.581638 iter 40 value 86.095994 iter 50 value 82.173300 iter 60 value 82.064797 iter 70 value 81.587932 iter 80 value 80.376222 iter 90 value 80.226587 iter 100 value 80.213654 final value 80.213654 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 99.386557 iter 10 value 91.076340 iter 20 value 85.599114 iter 30 value 83.100849 iter 40 value 82.012857 iter 50 value 81.951349 iter 60 value 81.907919 final value 81.907881 converged Fitting Repeat 5 # weights: 103 initial value 101.042181 iter 10 value 92.951826 iter 20 value 83.960745 iter 30 value 82.853294 iter 40 value 81.994843 iter 50 value 81.957444 iter 60 value 81.913306 iter 70 value 81.909034 final value 81.907881 converged Fitting Repeat 1 # weights: 305 initial value 111.008242 iter 10 value 94.051236 iter 20 value 83.725844 iter 30 value 82.923623 iter 40 value 82.135409 iter 50 value 81.139078 iter 60 value 80.143197 iter 70 value 79.517460 iter 80 value 79.121815 iter 90 value 79.011210 iter 100 value 79.003988 final value 79.003988 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 114.756585 iter 10 value 94.055172 iter 20 value 93.714639 iter 30 value 84.190895 iter 40 value 83.886904 iter 50 value 83.136652 iter 60 value 82.108828 iter 70 value 81.969178 iter 80 value 81.684490 iter 90 value 80.930848 iter 100 value 79.763116 final value 79.763116 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.461459 iter 10 value 94.008368 iter 20 value 93.470656 iter 30 value 93.284597 iter 40 value 88.916556 iter 50 value 83.778046 iter 60 value 81.394303 iter 70 value 81.073677 iter 80 value 80.507337 iter 90 value 79.551167 iter 100 value 79.039968 final value 79.039968 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.655450 iter 10 value 93.971822 iter 20 value 93.539279 iter 30 value 93.498273 iter 40 value 93.075038 iter 50 value 85.681366 iter 60 value 82.945921 iter 70 value 82.203868 iter 80 value 80.918053 iter 90 value 80.409614 iter 100 value 79.847359 final value 79.847359 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.090512 iter 10 value 93.543256 iter 20 value 91.956001 iter 30 value 84.846924 iter 40 value 81.767837 iter 50 value 80.239363 iter 60 value 78.674230 iter 70 value 78.362853 iter 80 value 78.259142 iter 90 value 78.230268 iter 100 value 78.214196 final value 78.214196 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 137.166889 iter 10 value 95.625874 iter 20 value 93.558083 iter 30 value 93.044353 iter 40 value 85.861150 iter 50 value 82.124663 iter 60 value 81.421761 iter 70 value 80.576088 iter 80 value 80.016840 iter 90 value 79.688713 iter 100 value 79.421041 final value 79.421041 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 112.238034 iter 10 value 89.649857 iter 20 value 84.475455 iter 30 value 79.932730 iter 40 value 79.068586 iter 50 value 78.636269 iter 60 value 78.375928 iter 70 value 78.348987 iter 80 value 78.239639 iter 90 value 78.221719 iter 100 value 78.166131 final value 78.166131 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 135.879229 iter 10 value 94.610781 iter 20 value 87.276398 iter 30 value 86.786766 iter 40 value 83.271088 iter 50 value 82.902107 iter 60 value 82.844255 iter 70 value 80.709736 iter 80 value 80.360640 iter 90 value 79.407312 iter 100 value 79.322318 final value 79.322318 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.358105 iter 10 value 95.195825 iter 20 value 91.139999 iter 30 value 86.042196 iter 40 value 82.925420 iter 50 value 82.201501 iter 60 value 81.847776 iter 70 value 81.078677 iter 80 value 80.027641 iter 90 value 79.787197 iter 100 value 79.624571 final value 79.624571 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 117.954480 iter 10 value 92.968885 iter 20 value 84.946855 iter 30 value 82.006327 iter 40 value 81.766107 iter 50 value 81.106437 iter 60 value 80.785153 iter 70 value 80.529347 iter 80 value 80.296989 iter 90 value 79.967678 iter 100 value 79.251914 final value 79.251914 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.600815 iter 10 value 94.054535 iter 20 value 93.380657 iter 30 value 86.821543 iter 40 value 86.377044 final value 86.367518 converged Fitting Repeat 2 # weights: 103 initial value 99.603904 final value 94.054639 converged Fitting Repeat 3 # weights: 103 initial value 97.506550 final value 94.054548 converged Fitting Repeat 4 # weights: 103 initial value 97.996553 iter 10 value 94.054492 final value 94.052964 converged Fitting Repeat 5 # weights: 103 initial value 95.463900 final value 94.055456 converged Fitting Repeat 1 # weights: 305 initial value 102.181220 iter 10 value 90.343761 iter 20 value 90.342145 iter 30 value 90.340702 iter 40 value 90.340203 iter 50 value 90.339348 iter 60 value 90.113227 iter 70 value 90.049296 iter 80 value 90.048668 iter 90 value 90.048496 iter 100 value 90.047946 final value 90.047946 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 95.182491 iter 10 value 87.700637 iter 20 value 83.808185 iter 30 value 82.714214 iter 40 value 82.698851 iter 50 value 82.697633 iter 60 value 80.666972 iter 70 value 80.404975 iter 80 value 79.844556 iter 90 value 79.806334 iter 100 value 79.730010 final value 79.730010 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 116.857253 iter 10 value 94.058068 iter 20 value 94.053155 iter 30 value 93.630280 iter 40 value 82.879370 iter 50 value 82.072388 iter 60 value 82.071747 iter 70 value 82.071110 final value 82.070854 converged Fitting Repeat 4 # weights: 305 initial value 99.073441 iter 10 value 93.308990 iter 20 value 93.300411 iter 30 value 91.132469 iter 40 value 90.438881 iter 50 value 90.438344 iter 60 value 88.409211 iter 70 value 86.075354 iter 80 value 82.207138 iter 90 value 82.149501 iter 100 value 82.147640 final value 82.147640 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 127.558383 iter 10 value 93.588586 iter 20 value 93.584464 iter 30 value 87.702110 iter 40 value 84.235869 iter 50 value 84.191786 iter 60 value 84.190840 final value 84.190408 converged Fitting Repeat 1 # weights: 507 initial value 106.585976 iter 10 value 93.385876 iter 20 value 93.330978 iter 30 value 93.302025 final value 93.301964 converged Fitting Repeat 2 # weights: 507 initial value 129.125650 iter 10 value 94.060253 iter 20 value 92.705824 iter 30 value 83.173478 iter 40 value 80.337591 iter 50 value 79.434721 iter 60 value 79.395122 final value 79.394098 converged Fitting Repeat 3 # weights: 507 initial value 122.590091 iter 10 value 94.061494 iter 20 value 94.052952 iter 30 value 85.753290 iter 40 value 85.412131 iter 50 value 84.823946 iter 60 value 83.855385 iter 70 value 83.853132 iter 80 value 83.013975 iter 90 value 82.037287 iter 100 value 81.640351 final value 81.640351 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.330901 iter 10 value 90.514794 iter 20 value 90.000525 iter 30 value 86.121286 iter 40 value 85.617702 iter 50 value 85.187935 iter 60 value 85.110103 iter 70 value 85.108479 iter 80 value 85.095824 iter 90 value 81.814326 iter 100 value 80.987801 final value 80.987801 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.591164 iter 10 value 93.463584 iter 20 value 93.430468 iter 30 value 93.342807 iter 40 value 82.307277 iter 50 value 81.652122 iter 60 value 81.247993 iter 70 value 81.236771 iter 80 value 80.985415 final value 80.985404 converged Fitting Repeat 1 # weights: 103 initial value 94.309572 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 94.470848 iter 10 value 93.728134 final value 93.714286 converged Fitting Repeat 3 # weights: 103 initial value 96.127233 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 99.521245 final value 94.008696 converged Fitting Repeat 5 # weights: 103 initial value 98.787212 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 117.167920 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 97.727776 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 91.096934 iter 10 value 84.838644 iter 20 value 81.086030 iter 30 value 79.151199 iter 40 value 79.082810 final value 79.080232 converged Fitting Repeat 4 # weights: 305 initial value 94.725371 final value 93.944596 converged Fitting Repeat 5 # weights: 305 initial value 96.866453 iter 10 value 93.722226 final value 93.722224 converged Fitting Repeat 1 # weights: 507 initial value 100.605160 final value 93.671509 converged Fitting Repeat 2 # weights: 507 initial value 101.079632 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 95.694654 iter 10 value 89.574308 iter 20 value 83.781393 iter 30 value 82.075941 iter 40 value 81.984381 final value 81.984066 converged Fitting Repeat 4 # weights: 507 initial value 106.047144 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 95.931431 final value 94.052911 converged Fitting Repeat 1 # weights: 103 initial value 97.231658 iter 10 value 93.869139 iter 20 value 88.922317 iter 30 value 84.194474 iter 40 value 83.859084 iter 50 value 79.973688 iter 60 value 79.661345 iter 70 value 79.628760 iter 80 value 79.394149 iter 90 value 79.206324 final value 79.205831 converged Fitting Repeat 2 # weights: 103 initial value 97.293138 iter 10 value 94.060126 iter 20 value 94.053538 iter 30 value 93.459769 iter 40 value 85.470496 iter 50 value 83.253745 iter 60 value 81.774082 iter 70 value 80.638071 iter 80 value 80.390620 iter 90 value 80.363007 final value 80.362840 converged Fitting Repeat 3 # weights: 103 initial value 96.390187 iter 10 value 94.059615 iter 20 value 87.444957 iter 30 value 85.108093 iter 40 value 83.706199 iter 50 value 83.222143 iter 60 value 83.050185 iter 70 value 82.650420 final value 82.649796 converged Fitting Repeat 4 # weights: 103 initial value 103.733326 iter 10 value 94.053414 iter 20 value 83.070643 iter 30 value 82.158889 iter 40 value 82.100939 iter 50 value 82.085793 final value 82.085008 converged Fitting Repeat 5 # weights: 103 initial value 108.353484 iter 10 value 94.054862 iter 20 value 88.903564 iter 30 value 85.559826 iter 40 value 85.185299 iter 50 value 84.935175 iter 60 value 84.695477 iter 70 value 83.881905 iter 80 value 83.363218 iter 90 value 82.701643 iter 100 value 82.663004 final value 82.663004 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 107.770045 iter 10 value 94.076295 iter 20 value 92.002141 iter 30 value 86.256977 iter 40 value 85.435680 iter 50 value 82.820971 iter 60 value 81.046506 iter 70 value 79.561144 iter 80 value 78.599703 iter 90 value 78.357857 iter 100 value 78.291962 final value 78.291962 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.012546 iter 10 value 94.573581 iter 20 value 94.037750 iter 30 value 93.929023 iter 40 value 85.308180 iter 50 value 83.477709 iter 60 value 81.724560 iter 70 value 79.722410 iter 80 value 79.516269 iter 90 value 79.389711 iter 100 value 79.311886 final value 79.311886 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.135857 iter 10 value 93.018593 iter 20 value 83.438768 iter 30 value 82.400388 iter 40 value 82.172836 iter 50 value 81.374341 iter 60 value 79.739131 iter 70 value 79.379719 iter 80 value 78.986842 iter 90 value 78.502543 iter 100 value 78.119693 final value 78.119693 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.160393 iter 10 value 94.520006 iter 20 value 93.791902 iter 30 value 90.938980 iter 40 value 89.247039 iter 50 value 88.661921 iter 60 value 88.015268 iter 70 value 85.236544 iter 80 value 84.562420 iter 90 value 82.649766 iter 100 value 78.993242 final value 78.993242 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.994363 iter 10 value 94.287456 iter 20 value 93.982295 iter 30 value 86.286636 iter 40 value 85.007039 iter 50 value 82.439552 iter 60 value 81.745791 iter 70 value 80.874793 iter 80 value 80.709262 iter 90 value 80.467141 iter 100 value 80.316801 final value 80.316801 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 118.833804 iter 10 value 93.931877 iter 20 value 88.469033 iter 30 value 87.073373 iter 40 value 86.736370 iter 50 value 82.442341 iter 60 value 81.046085 iter 70 value 80.499029 iter 80 value 80.451014 iter 90 value 80.349226 iter 100 value 80.265112 final value 80.265112 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.143497 iter 10 value 93.743684 iter 20 value 84.421221 iter 30 value 83.818792 iter 40 value 82.796212 iter 50 value 81.270413 iter 60 value 80.777887 iter 70 value 80.717837 iter 80 value 79.701930 iter 90 value 79.363481 iter 100 value 78.767647 final value 78.767647 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 101.965963 iter 10 value 94.783189 iter 20 value 84.630072 iter 30 value 83.705539 iter 40 value 81.274848 iter 50 value 78.327299 iter 60 value 77.883693 iter 70 value 77.684327 iter 80 value 77.523345 iter 90 value 77.320266 iter 100 value 77.237236 final value 77.237236 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 102.426368 iter 10 value 92.545755 iter 20 value 83.109643 iter 30 value 81.835651 iter 40 value 81.337135 iter 50 value 80.386961 iter 60 value 79.870983 iter 70 value 79.635942 iter 80 value 79.087420 iter 90 value 78.374001 iter 100 value 78.191350 final value 78.191350 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.197547 iter 10 value 90.747681 iter 20 value 84.062349 iter 30 value 80.133168 iter 40 value 79.473496 iter 50 value 78.660679 iter 60 value 78.480668 iter 70 value 78.351183 iter 80 value 78.173900 iter 90 value 78.021961 iter 100 value 77.942831 final value 77.942831 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.617893 final value 94.054509 converged Fitting Repeat 2 # weights: 103 initial value 100.726318 final value 94.054661 converged Fitting Repeat 3 # weights: 103 initial value 97.265206 iter 10 value 93.962973 iter 20 value 90.609017 iter 30 value 85.865905 iter 40 value 85.853343 iter 50 value 85.502711 iter 60 value 85.372009 iter 70 value 85.371802 iter 70 value 85.371801 iter 70 value 85.371801 final value 85.371801 converged Fitting Repeat 4 # weights: 103 initial value 98.223866 final value 94.054484 converged Fitting Repeat 5 # weights: 103 initial value 95.300578 iter 10 value 94.055459 iter 20 value 94.052914 iter 30 value 87.626368 iter 40 value 87.457822 iter 50 value 82.596966 iter 60 value 81.641075 iter 70 value 81.322773 iter 80 value 81.314405 iter 90 value 81.310144 final value 81.309964 converged Fitting Repeat 1 # weights: 305 initial value 97.904570 final value 94.057660 converged Fitting Repeat 2 # weights: 305 initial value 101.965877 iter 10 value 93.826761 iter 20 value 93.823182 iter 30 value 93.479871 iter 40 value 93.476890 iter 50 value 93.419127 iter 60 value 93.418181 iter 70 value 93.385174 iter 80 value 93.383301 iter 90 value 93.325821 iter 100 value 86.653390 final value 86.653390 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.636038 iter 10 value 87.556299 iter 20 value 83.241501 iter 30 value 81.989921 iter 40 value 80.093830 iter 50 value 79.405243 iter 60 value 79.363345 iter 70 value 79.361431 iter 80 value 79.358404 iter 90 value 79.356281 iter 100 value 79.299252 final value 79.299252 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 99.030808 iter 10 value 94.057206 iter 20 value 93.979484 iter 30 value 92.982978 iter 40 value 92.962399 iter 50 value 92.566783 iter 60 value 92.562981 final value 92.562943 converged Fitting Repeat 5 # weights: 305 initial value 103.461041 iter 10 value 94.013556 iter 20 value 94.010394 iter 30 value 93.792099 iter 40 value 87.167806 iter 50 value 85.815631 iter 60 value 85.646190 final value 85.609962 converged Fitting Repeat 1 # weights: 507 initial value 106.565043 iter 10 value 93.673077 iter 20 value 93.650450 iter 30 value 93.567691 iter 40 value 92.393324 iter 50 value 81.263065 iter 60 value 79.044762 iter 70 value 78.843522 iter 80 value 78.582691 iter 90 value 78.242173 iter 100 value 78.184788 final value 78.184788 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 100.713951 iter 10 value 94.016856 iter 20 value 93.894144 iter 30 value 93.671876 iter 30 value 93.671876 iter 30 value 93.671876 final value 93.671876 converged Fitting Repeat 3 # weights: 507 initial value 105.556079 iter 10 value 93.722255 iter 20 value 90.280023 iter 30 value 81.311958 final value 81.311718 converged Fitting Repeat 4 # weights: 507 initial value 116.906343 iter 10 value 94.014283 iter 20 value 93.962686 iter 30 value 93.949989 iter 40 value 93.945394 iter 50 value 93.943809 iter 60 value 86.914165 iter 70 value 85.352508 iter 80 value 79.890923 iter 90 value 79.833100 iter 100 value 79.827456 final value 79.827456 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.198102 iter 10 value 94.016541 iter 20 value 94.009634 iter 30 value 93.541246 iter 40 value 91.963353 iter 50 value 91.953282 iter 60 value 91.953060 final value 91.953054 converged Fitting Repeat 1 # weights: 103 initial value 101.784157 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 107.238478 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.847799 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 96.616131 final value 94.466823 converged Fitting Repeat 5 # weights: 103 initial value 100.767718 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 101.864918 iter 10 value 87.705521 final value 87.590732 converged Fitting Repeat 2 # weights: 305 initial value 96.914412 final value 94.466823 converged Fitting Repeat 3 # weights: 305 initial value 99.921275 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.002804 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 105.395062 final value 94.484210 converged Fitting Repeat 1 # weights: 507 initial value 99.520860 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 110.611595 iter 10 value 94.466590 final value 94.466580 converged Fitting Repeat 3 # weights: 507 initial value 105.215855 iter 10 value 94.467370 final value 94.466823 converged Fitting Repeat 4 # weights: 507 initial value 104.192654 final value 94.466823 converged Fitting Repeat 5 # weights: 507 initial value 94.924051 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 97.996152 iter 10 value 90.044354 iter 20 value 85.808866 iter 30 value 85.615795 iter 40 value 85.559965 iter 50 value 85.463044 iter 60 value 85.460386 final value 85.460369 converged Fitting Repeat 2 # weights: 103 initial value 108.114053 iter 10 value 94.488947 iter 20 value 93.954117 iter 30 value 93.870625 iter 40 value 93.835527 iter 50 value 92.225338 iter 60 value 84.892461 iter 70 value 83.922290 iter 80 value 83.809353 iter 90 value 83.531879 iter 100 value 83.403862 final value 83.403862 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.846681 iter 10 value 94.459141 iter 20 value 88.808197 iter 30 value 87.102651 iter 40 value 86.782274 iter 50 value 85.824365 iter 60 value 85.494777 iter 70 value 85.451025 iter 80 value 85.278151 iter 90 value 85.195102 final value 85.192346 converged Fitting Repeat 4 # weights: 103 initial value 112.150828 iter 10 value 94.076193 iter 20 value 91.146059 iter 30 value 87.246313 iter 40 value 86.880655 iter 50 value 86.550760 iter 60 value 85.742733 iter 70 value 85.537890 iter 80 value 85.486215 iter 90 value 85.405878 iter 100 value 85.340098 final value 85.340098 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 99.196220 iter 10 value 94.527697 iter 20 value 93.920175 iter 30 value 86.848463 iter 40 value 85.716400 iter 50 value 85.566668 iter 60 value 84.472846 iter 70 value 83.565636 iter 80 value 83.251329 final value 83.231462 converged Fitting Repeat 1 # weights: 305 initial value 137.928402 iter 10 value 95.392340 iter 20 value 92.911936 iter 30 value 88.846131 iter 40 value 87.109284 iter 50 value 86.735800 iter 60 value 85.337912 iter 70 value 84.714701 iter 80 value 83.835087 iter 90 value 83.644221 iter 100 value 83.381188 final value 83.381188 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.040278 iter 10 value 94.556462 iter 20 value 94.410964 iter 30 value 91.851859 iter 40 value 88.401661 iter 50 value 86.665411 iter 60 value 85.846225 iter 70 value 85.744453 iter 80 value 84.928303 iter 90 value 84.145593 iter 100 value 83.056826 final value 83.056826 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 109.946567 iter 10 value 94.484904 iter 20 value 88.644542 iter 30 value 87.831463 iter 40 value 87.277364 iter 50 value 86.109886 iter 60 value 85.757402 iter 70 value 85.485636 iter 80 value 84.757156 iter 90 value 83.559838 iter 100 value 83.223195 final value 83.223195 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.386817 iter 10 value 94.475421 iter 20 value 92.640758 iter 30 value 92.425172 iter 40 value 89.822505 iter 50 value 86.062756 iter 60 value 85.628190 iter 70 value 85.416638 iter 80 value 85.077894 iter 90 value 84.342944 iter 100 value 83.449847 final value 83.449847 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 109.067590 iter 10 value 94.465383 iter 20 value 93.404594 iter 30 value 93.263085 iter 40 value 86.511971 iter 50 value 86.207733 iter 60 value 85.992766 iter 70 value 85.128367 iter 80 value 84.372763 iter 90 value 83.898872 iter 100 value 83.686642 final value 83.686642 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.843040 iter 10 value 92.492482 iter 20 value 86.792671 iter 30 value 85.968564 iter 40 value 84.849899 iter 50 value 83.343054 iter 60 value 83.205971 iter 70 value 83.155123 iter 80 value 82.655258 iter 90 value 82.256397 iter 100 value 82.041413 final value 82.041413 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.790205 iter 10 value 94.395931 iter 20 value 89.736891 iter 30 value 85.468598 iter 40 value 84.721022 iter 50 value 84.041142 iter 60 value 83.121892 iter 70 value 82.738200 iter 80 value 82.672677 iter 90 value 82.487800 iter 100 value 82.287864 final value 82.287864 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 121.880765 iter 10 value 94.766434 iter 20 value 94.254988 iter 30 value 92.152267 iter 40 value 90.772834 iter 50 value 88.083319 iter 60 value 85.467725 iter 70 value 84.311587 iter 80 value 82.912245 iter 90 value 82.375253 iter 100 value 82.070113 final value 82.070113 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.290265 iter 10 value 94.167621 iter 20 value 90.112091 iter 30 value 87.222852 iter 40 value 86.491898 iter 50 value 85.955782 iter 60 value 84.614689 iter 70 value 84.019006 iter 80 value 83.591159 iter 90 value 83.381127 iter 100 value 83.230522 final value 83.230522 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.931126 iter 10 value 94.360839 iter 20 value 92.572985 iter 30 value 92.513901 iter 40 value 92.175227 iter 50 value 88.338155 iter 60 value 86.305854 iter 70 value 85.876951 iter 80 value 85.013081 iter 90 value 84.404255 iter 100 value 83.745039 final value 83.745039 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.233360 iter 10 value 94.485632 iter 20 value 94.471334 iter 30 value 88.827115 iter 40 value 88.466840 iter 50 value 88.316662 final value 88.316502 converged Fitting Repeat 2 # weights: 103 initial value 103.073649 final value 94.485793 converged Fitting Repeat 3 # weights: 103 initial value 98.213087 final value 94.486106 converged Fitting Repeat 4 # weights: 103 initial value 102.467268 final value 94.468420 converged Fitting Repeat 5 # weights: 103 initial value 96.121822 final value 94.485912 converged Fitting Repeat 1 # weights: 305 initial value 95.000578 iter 10 value 94.486662 iter 20 value 94.078790 iter 30 value 87.768945 iter 40 value 87.417425 iter 50 value 87.301895 iter 60 value 87.269594 iter 70 value 87.269531 final value 87.269529 converged Fitting Repeat 2 # weights: 305 initial value 99.131853 iter 10 value 94.488912 iter 20 value 94.449492 iter 30 value 87.892674 iter 40 value 87.353220 iter 50 value 87.339469 iter 60 value 87.337096 iter 70 value 87.331680 iter 80 value 86.750796 iter 90 value 86.644490 iter 100 value 86.642586 final value 86.642586 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.837076 iter 10 value 94.489067 iter 20 value 94.479661 iter 30 value 92.722994 iter 40 value 89.407373 iter 50 value 89.406307 iter 60 value 89.301156 iter 70 value 89.288655 iter 80 value 89.288543 final value 89.288528 converged Fitting Repeat 4 # weights: 305 initial value 102.647744 iter 10 value 94.489019 iter 20 value 94.428923 iter 30 value 87.578157 iter 40 value 87.532178 iter 50 value 87.000956 iter 60 value 86.386859 iter 70 value 85.699571 iter 80 value 85.698923 iter 90 value 85.696199 final value 85.695896 converged Fitting Repeat 5 # weights: 305 initial value 97.773765 iter 10 value 94.431472 iter 20 value 94.428319 iter 30 value 94.424272 iter 40 value 94.031984 iter 50 value 93.698227 iter 60 value 88.339201 iter 70 value 87.292127 iter 80 value 84.197929 iter 90 value 82.780949 iter 100 value 82.514928 final value 82.514928 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 121.852855 iter 10 value 94.544271 iter 20 value 94.462207 iter 30 value 91.610098 iter 40 value 87.691427 iter 50 value 87.538104 iter 60 value 87.513576 iter 70 value 87.499970 iter 80 value 85.408336 iter 90 value 85.068774 iter 100 value 85.059137 final value 85.059137 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 100.345991 iter 10 value 94.474631 iter 20 value 94.335011 iter 30 value 89.804546 iter 40 value 84.854270 iter 50 value 84.539262 iter 60 value 84.525972 iter 70 value 84.510378 final value 84.510310 converged Fitting Repeat 3 # weights: 507 initial value 99.306389 iter 10 value 94.484532 iter 20 value 94.213949 iter 30 value 86.711738 iter 40 value 86.556667 iter 50 value 86.549412 iter 60 value 86.549006 final value 86.547776 converged Fitting Repeat 4 # weights: 507 initial value 102.895566 iter 10 value 94.492386 iter 20 value 94.476248 iter 30 value 93.702951 final value 93.702940 converged Fitting Repeat 5 # weights: 507 initial value 96.928448 iter 10 value 94.473146 iter 20 value 92.095316 final value 91.907812 converged Fitting Repeat 1 # weights: 103 initial value 98.568229 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.403834 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 95.261373 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 100.098333 final value 94.466823 converged Fitting Repeat 5 # weights: 103 initial value 94.574727 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 101.865691 iter 10 value 93.956631 iter 20 value 93.918057 final value 93.918040 converged Fitting Repeat 2 # weights: 305 initial value 97.300910 final value 94.466823 converged Fitting Repeat 3 # weights: 305 initial value 95.576720 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 98.387439 iter 10 value 92.316148 iter 20 value 88.133414 iter 30 value 87.799779 iter 40 value 87.589861 iter 50 value 87.588902 final value 87.588893 converged Fitting Repeat 5 # weights: 305 initial value 96.966021 final value 94.461539 converged Fitting Repeat 1 # weights: 507 initial value 105.515846 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 103.121374 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 94.884301 final value 94.482932 converged Fitting Repeat 4 # weights: 507 initial value 105.367778 final value 94.449438 converged Fitting Repeat 5 # weights: 507 initial value 104.540087 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 103.787916 iter 10 value 94.491347 iter 20 value 92.955590 iter 30 value 87.531684 iter 40 value 87.375333 iter 50 value 87.257281 iter 60 value 87.195964 iter 70 value 86.543549 iter 80 value 85.926817 iter 90 value 85.831913 iter 100 value 85.342875 final value 85.342875 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 109.693461 iter 10 value 94.345737 iter 20 value 91.395663 iter 30 value 91.011213 iter 40 value 87.101238 iter 50 value 87.022212 iter 60 value 86.915006 iter 70 value 86.716416 iter 80 value 86.088742 iter 90 value 85.462714 iter 100 value 84.463768 final value 84.463768 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 97.772803 iter 10 value 94.287180 iter 20 value 90.451248 iter 30 value 88.611372 iter 40 value 87.792260 iter 50 value 86.036738 iter 60 value 84.392621 iter 70 value 83.915023 iter 80 value 83.803801 final value 83.803790 converged Fitting Repeat 4 # weights: 103 initial value 107.335193 iter 10 value 94.485404 iter 20 value 90.252547 iter 30 value 87.306608 iter 40 value 87.161028 iter 50 value 86.865044 iter 60 value 86.722086 iter 70 value 85.975063 iter 80 value 85.596384 final value 85.532314 converged Fitting Repeat 5 # weights: 103 initial value 98.459180 iter 10 value 94.490757 iter 20 value 93.870037 iter 30 value 88.932248 iter 40 value 87.179575 iter 50 value 86.896032 iter 60 value 86.713475 iter 70 value 86.462510 iter 80 value 85.578446 iter 90 value 85.532344 final value 85.532314 converged Fitting Repeat 1 # weights: 305 initial value 126.149757 iter 10 value 94.512562 iter 20 value 92.322605 iter 30 value 91.378239 iter 40 value 89.440002 iter 50 value 87.389089 iter 60 value 86.313366 iter 70 value 85.468789 iter 80 value 84.601815 iter 90 value 83.732675 iter 100 value 83.515597 final value 83.515597 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.524570 iter 10 value 94.532047 iter 20 value 93.453616 iter 30 value 86.145504 iter 40 value 84.852583 iter 50 value 83.462853 iter 60 value 83.295049 iter 70 value 83.202083 iter 80 value 82.970083 iter 90 value 82.824937 iter 100 value 82.713987 final value 82.713987 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.112434 iter 10 value 94.496908 iter 20 value 94.434338 iter 30 value 91.311874 iter 40 value 87.656395 iter 50 value 84.956733 iter 60 value 84.237181 iter 70 value 83.698048 iter 80 value 82.984118 iter 90 value 82.586665 iter 100 value 82.407632 final value 82.407632 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.338014 iter 10 value 93.591206 iter 20 value 87.910928 iter 30 value 87.761989 iter 40 value 87.386727 iter 50 value 86.649808 iter 60 value 86.034331 iter 70 value 84.416512 iter 80 value 83.767230 iter 90 value 83.659712 iter 100 value 83.641352 final value 83.641352 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 112.208085 iter 10 value 95.989350 iter 20 value 95.325070 iter 30 value 91.613493 iter 40 value 88.164470 iter 50 value 86.417690 iter 60 value 85.518029 iter 70 value 84.882714 iter 80 value 83.726722 iter 90 value 83.100038 iter 100 value 82.871740 final value 82.871740 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.357077 iter 10 value 93.875781 iter 20 value 88.747080 iter 30 value 87.755667 iter 40 value 86.130236 iter 50 value 84.827317 iter 60 value 84.165000 iter 70 value 83.403732 iter 80 value 82.996859 iter 90 value 82.321738 iter 100 value 82.175372 final value 82.175372 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 102.862579 iter 10 value 94.225651 iter 20 value 89.129616 iter 30 value 85.313857 iter 40 value 84.199761 iter 50 value 83.756916 iter 60 value 83.592967 iter 70 value 83.322999 iter 80 value 83.011424 iter 90 value 82.874920 iter 100 value 82.570354 final value 82.570354 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 106.037940 iter 10 value 95.629789 iter 20 value 90.245967 iter 30 value 87.170625 iter 40 value 85.158391 iter 50 value 83.329278 iter 60 value 83.076362 iter 70 value 82.798489 iter 80 value 82.598695 iter 90 value 82.458184 iter 100 value 82.428861 final value 82.428861 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.051048 iter 10 value 94.609071 iter 20 value 90.320223 iter 30 value 87.776510 iter 40 value 85.116646 iter 50 value 84.195300 iter 60 value 83.390477 iter 70 value 83.182660 iter 80 value 82.883664 iter 90 value 82.643551 iter 100 value 82.540161 final value 82.540161 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.899520 iter 10 value 94.561509 iter 20 value 91.597973 iter 30 value 87.862560 iter 40 value 87.491542 iter 50 value 87.208956 iter 60 value 85.954934 iter 70 value 83.475563 iter 80 value 82.880047 iter 90 value 82.791751 iter 100 value 82.598857 final value 82.598857 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.336805 final value 94.485562 converged Fitting Repeat 2 # weights: 103 initial value 100.143469 iter 10 value 94.485953 iter 20 value 94.484277 iter 30 value 93.838116 iter 40 value 86.273765 iter 50 value 86.207579 iter 60 value 85.893802 iter 70 value 85.164854 iter 80 value 85.155621 final value 85.155500 converged Fitting Repeat 3 # weights: 103 initial value 104.032091 iter 10 value 94.486062 iter 20 value 94.481409 iter 30 value 93.911465 iter 40 value 86.019947 iter 50 value 85.275848 iter 60 value 85.275206 iter 70 value 85.147423 final value 85.147369 converged Fitting Repeat 4 # weights: 103 initial value 98.418718 final value 94.485687 converged Fitting Repeat 5 # weights: 103 initial value 96.556126 final value 94.485654 converged Fitting Repeat 1 # weights: 305 initial value 104.047142 iter 10 value 90.998432 iter 20 value 89.605636 iter 30 value 89.063278 iter 40 value 89.061744 final value 89.060261 converged Fitting Repeat 2 # weights: 305 initial value 99.063012 iter 10 value 94.488881 iter 20 value 94.477823 iter 30 value 89.319361 iter 40 value 88.710907 iter 50 value 88.709332 iter 60 value 85.332570 iter 70 value 85.160636 iter 80 value 85.148513 iter 80 value 85.148512 iter 80 value 85.148512 final value 85.148512 converged Fitting Repeat 3 # weights: 305 initial value 99.778532 iter 10 value 94.471660 iter 20 value 94.463361 iter 30 value 94.429733 final value 94.429449 converged Fitting Repeat 4 # weights: 305 initial value 107.613563 iter 10 value 94.489514 iter 20 value 94.465009 iter 30 value 88.614573 iter 40 value 86.508195 final value 86.504498 converged Fitting Repeat 5 # weights: 305 initial value 97.785910 iter 10 value 94.489245 iter 20 value 94.484234 iter 30 value 93.995815 iter 40 value 87.342492 iter 50 value 86.454807 iter 60 value 86.366590 iter 70 value 86.357460 final value 86.353940 converged Fitting Repeat 1 # weights: 507 initial value 106.625961 iter 10 value 94.458189 iter 20 value 94.388520 iter 30 value 94.385048 iter 40 value 94.383404 iter 50 value 94.380095 iter 60 value 94.379748 final value 94.379690 converged Fitting Repeat 2 # weights: 507 initial value 119.363248 iter 10 value 94.492710 iter 20 value 94.410162 iter 30 value 90.541803 iter 40 value 90.448951 iter 50 value 90.399940 iter 60 value 87.525183 iter 70 value 84.559688 iter 80 value 83.772231 iter 90 value 83.548258 iter 100 value 83.468887 final value 83.468887 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.758405 iter 10 value 94.492170 iter 20 value 94.484492 iter 30 value 94.426180 iter 40 value 87.333397 iter 50 value 85.340668 iter 60 value 84.750474 final value 84.750417 converged Fitting Repeat 4 # weights: 507 initial value 94.679008 iter 10 value 94.474724 iter 20 value 94.463538 iter 30 value 90.189053 iter 40 value 88.916045 iter 50 value 88.895049 iter 60 value 88.567057 iter 70 value 87.867976 iter 80 value 87.827355 iter 90 value 87.822209 iter 100 value 87.812649 final value 87.812649 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 119.431996 iter 10 value 94.457631 iter 20 value 94.450976 final value 94.450953 converged Fitting Repeat 1 # weights: 103 initial value 117.412020 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.839881 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 103.568125 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 103.907377 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 103.297597 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 98.436232 iter 10 value 94.199750 iter 20 value 90.040289 iter 30 value 89.815382 final value 89.812156 converged Fitting Repeat 2 # weights: 305 initial value 102.774379 final value 94.448052 converged Fitting Repeat 3 # weights: 305 initial value 93.242969 iter 10 value 84.243341 iter 20 value 81.987241 iter 30 value 81.968514 iter 40 value 81.966771 final value 81.966696 converged Fitting Repeat 4 # weights: 305 initial value 97.682095 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 100.292771 final value 94.275363 converged Fitting Repeat 1 # weights: 507 initial value 101.931752 iter 10 value 89.231554 iter 20 value 86.760882 iter 30 value 86.130312 iter 40 value 86.129365 iter 50 value 85.577621 iter 60 value 85.490857 final value 85.490753 converged Fitting Repeat 2 # weights: 507 initial value 119.731489 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 100.240079 iter 10 value 88.571746 iter 20 value 86.854422 final value 86.644766 converged Fitting Repeat 4 # weights: 507 initial value 95.220038 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 97.714241 final value 94.275362 converged Fitting Repeat 1 # weights: 103 initial value 98.907117 iter 10 value 94.491157 iter 20 value 93.937625 iter 30 value 93.710466 iter 40 value 93.703720 iter 50 value 88.206139 iter 60 value 85.400205 iter 70 value 84.938816 iter 80 value 84.927486 iter 90 value 84.925184 iter 100 value 84.864431 final value 84.864431 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.863548 iter 10 value 94.489508 iter 20 value 94.194437 iter 30 value 90.236062 iter 40 value 89.824350 iter 50 value 89.632952 iter 60 value 82.613194 iter 70 value 81.662879 iter 80 value 81.500477 iter 90 value 80.925102 iter 100 value 80.576514 final value 80.576514 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 99.572995 iter 10 value 94.392417 iter 20 value 89.555187 iter 30 value 86.539828 iter 40 value 85.403572 iter 50 value 85.115067 iter 60 value 84.881282 iter 70 value 84.833666 final value 84.833656 converged Fitting Repeat 4 # weights: 103 initial value 96.389121 iter 10 value 94.466682 iter 20 value 88.873005 iter 30 value 85.801663 iter 40 value 85.590137 iter 50 value 85.443533 iter 60 value 85.329251 iter 70 value 84.812033 iter 80 value 81.857658 iter 90 value 81.114108 iter 100 value 80.669073 final value 80.669073 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 99.504983 iter 10 value 94.518898 iter 20 value 94.489737 iter 30 value 94.016322 iter 40 value 86.419146 iter 50 value 83.914982 iter 60 value 82.155323 iter 70 value 81.135867 iter 80 value 80.847205 iter 90 value 80.772875 iter 100 value 80.627244 final value 80.627244 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 108.523947 iter 10 value 94.378777 iter 20 value 86.481624 iter 30 value 85.276058 iter 40 value 84.867781 iter 50 value 84.814997 iter 60 value 84.780685 iter 70 value 84.198565 iter 80 value 83.088931 iter 90 value 81.098845 iter 100 value 80.030265 final value 80.030265 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.047129 iter 10 value 94.176689 iter 20 value 92.213559 iter 30 value 86.112533 iter 40 value 84.760081 iter 50 value 84.377479 iter 60 value 83.837739 iter 70 value 83.600358 iter 80 value 81.684820 iter 90 value 81.268761 iter 100 value 80.983328 final value 80.983328 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.599196 iter 10 value 93.801364 iter 20 value 82.897766 iter 30 value 82.061633 iter 40 value 81.650335 iter 50 value 81.028440 iter 60 value 80.796030 iter 70 value 80.695739 iter 80 value 80.522080 iter 90 value 80.394975 iter 100 value 80.309731 final value 80.309731 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.062015 iter 10 value 94.396601 iter 20 value 93.574407 iter 30 value 92.873785 iter 40 value 87.120188 iter 50 value 84.708951 iter 60 value 82.686607 iter 70 value 82.074959 iter 80 value 81.529757 iter 90 value 81.273222 iter 100 value 80.434359 final value 80.434359 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.038294 iter 10 value 94.545383 iter 20 value 87.399659 iter 30 value 85.834114 iter 40 value 84.798590 iter 50 value 84.258879 iter 60 value 82.500089 iter 70 value 80.183940 iter 80 value 79.508865 iter 90 value 79.400344 iter 100 value 79.322934 final value 79.322934 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 129.672671 iter 10 value 94.351110 iter 20 value 89.916955 iter 30 value 83.866161 iter 40 value 81.719506 iter 50 value 79.617169 iter 60 value 79.438961 iter 70 value 78.976461 iter 80 value 78.890457 iter 90 value 78.828494 iter 100 value 78.802411 final value 78.802411 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.645981 iter 10 value 94.275634 iter 20 value 84.042396 iter 30 value 83.192830 iter 40 value 82.532263 iter 50 value 81.895260 iter 60 value 81.110241 iter 70 value 80.787242 iter 80 value 80.626739 iter 90 value 80.464679 iter 100 value 80.034587 final value 80.034587 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.213478 iter 10 value 94.467350 iter 20 value 87.315496 iter 30 value 85.685218 iter 40 value 84.488524 iter 50 value 82.141060 iter 60 value 81.424999 iter 70 value 81.134384 iter 80 value 80.179090 iter 90 value 79.952706 iter 100 value 79.839188 final value 79.839188 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 121.834995 iter 10 value 94.189874 iter 20 value 87.764070 iter 30 value 84.974583 iter 40 value 84.429688 iter 50 value 81.967492 iter 60 value 80.865440 iter 70 value 80.098863 iter 80 value 79.932848 iter 90 value 79.835720 iter 100 value 79.504603 final value 79.504603 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.245956 iter 10 value 95.157664 iter 20 value 85.799459 iter 30 value 83.763768 iter 40 value 81.992360 iter 50 value 80.883928 iter 60 value 80.141392 iter 70 value 80.016622 iter 80 value 79.874354 iter 90 value 79.734644 iter 100 value 79.580596 final value 79.580596 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.754329 final value 94.485883 converged Fitting Repeat 2 # weights: 103 initial value 98.742584 final value 94.486071 converged Fitting Repeat 3 # weights: 103 initial value 98.019756 final value 94.485831 converged Fitting Repeat 4 # weights: 103 initial value 98.152443 final value 94.486139 converged Fitting Repeat 5 # weights: 103 initial value 95.212699 final value 94.485526 converged Fitting Repeat 1 # weights: 305 initial value 98.530762 iter 10 value 94.488481 iter 20 value 93.838932 iter 30 value 93.588869 iter 40 value 93.579846 iter 50 value 90.937357 iter 60 value 85.491837 final value 85.491427 converged Fitting Repeat 2 # weights: 305 initial value 101.105768 iter 10 value 94.488064 iter 20 value 94.401239 final value 93.637817 converged Fitting Repeat 3 # weights: 305 initial value 99.148659 iter 10 value 93.644114 iter 20 value 93.641921 iter 30 value 93.576477 iter 40 value 93.065532 iter 40 value 93.065531 iter 50 value 92.838364 iter 60 value 83.812889 iter 70 value 79.920476 iter 80 value 79.376523 iter 90 value 79.173424 iter 100 value 78.728176 final value 78.728176 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 96.531005 iter 10 value 94.489115 iter 20 value 94.483913 iter 30 value 91.738378 final value 91.580858 converged Fitting Repeat 5 # weights: 305 initial value 107.189838 iter 10 value 93.988909 iter 20 value 93.985648 iter 30 value 87.767398 iter 40 value 83.920571 iter 50 value 81.050586 iter 60 value 80.913238 iter 70 value 80.912819 iter 80 value 80.912212 final value 80.912047 converged Fitting Repeat 1 # weights: 507 initial value 102.937398 iter 10 value 94.456033 iter 20 value 94.449781 final value 94.449598 converged Fitting Repeat 2 # weights: 507 initial value 116.270475 iter 10 value 94.492515 iter 20 value 94.484162 iter 30 value 85.046325 iter 40 value 82.763093 iter 50 value 82.130200 iter 60 value 82.098814 iter 70 value 81.667644 iter 80 value 79.596177 iter 90 value 79.374655 iter 100 value 79.368134 final value 79.368134 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.860945 iter 10 value 93.781514 iter 20 value 93.764030 iter 30 value 93.579023 iter 40 value 93.476378 iter 50 value 93.476271 iter 60 value 93.475724 iter 70 value 93.475587 final value 93.475556 converged Fitting Repeat 4 # weights: 507 initial value 109.218106 iter 10 value 94.283845 iter 20 value 94.277413 iter 30 value 94.015935 iter 40 value 91.444173 iter 50 value 91.272520 iter 60 value 80.847927 iter 70 value 79.811985 final value 79.811531 converged Fitting Repeat 5 # weights: 507 initial value 96.761344 iter 10 value 94.283112 iter 20 value 94.173713 iter 30 value 83.352553 iter 40 value 81.954933 iter 50 value 81.781035 iter 60 value 81.585799 iter 70 value 81.391882 iter 80 value 78.954189 iter 90 value 78.336638 iter 100 value 78.315215 final value 78.315215 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 129.206597 iter 10 value 117.895848 iter 20 value 115.550654 iter 30 value 107.050275 iter 40 value 106.715079 iter 50 value 106.645360 final value 106.645172 converged Fitting Repeat 2 # weights: 507 initial value 123.355089 iter 10 value 117.899157 iter 20 value 117.872993 iter 30 value 114.812861 iter 40 value 114.039526 iter 50 value 114.032297 iter 60 value 108.627735 iter 70 value 108.401831 iter 80 value 108.369145 iter 90 value 108.366311 iter 100 value 108.362982 final value 108.362982 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 158.090359 iter 10 value 117.203318 iter 20 value 116.959323 iter 30 value 116.956498 iter 40 value 116.871933 final value 116.869127 converged Fitting Repeat 4 # weights: 507 initial value 123.727945 iter 10 value 117.898439 iter 20 value 117.887797 iter 30 value 114.755351 iter 40 value 108.132238 iter 50 value 107.004679 iter 60 value 106.746255 iter 70 value 102.517258 iter 80 value 101.111117 iter 90 value 101.062518 iter 100 value 101.054332 final value 101.054332 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 131.002655 iter 10 value 116.630956 iter 20 value 112.021345 iter 30 value 109.838292 iter 40 value 109.659431 iter 50 value 109.270335 iter 60 value 109.162416 iter 70 value 109.160172 iter 80 value 109.151092 final value 109.150989 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Fri Feb 24 12:41:12 2023 *********************************************** Number of test functions: 8 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 8 test functions, 0 errors, 0 failures Number of test functions: 8 Number of errors: 0 Number of failures: 0 Warning messages: 1: The `.data` argument of `add_column()` must have unique names as of tibble 3.0.0. ℹ Use `.name_repair = "minimal"`. ℹ The deprecated feature was likely used in the tibble package. Please report the issue at <https://github.com/tidyverse/tibble/issues>. 2: `repeats` has no meaning for this resampling method. 3: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 53.470 1.805 68.822
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 37.915 | 0.548 | 38.475 | |
FreqInteractors | 0.289 | 0.008 | 0.299 | |
calculateAAC | 0.066 | 0.015 | 0.082 | |
calculateAutocor | 0.762 | 0.003 | 0.768 | |
calculateBE | 0.242 | 0.000 | 0.242 | |
calculateCTDC | 0.134 | 0.004 | 0.138 | |
calculateCTDD | 0.945 | 0.012 | 0.958 | |
calculateCTDT | 0.311 | 0.000 | 0.311 | |
calculateCTriad | 0.475 | 0.008 | 0.483 | |
calculateDC | 0.137 | 0.004 | 0.141 | |
calculateF | 0.755 | 0.001 | 0.756 | |
calculateKSAAP | 0.167 | 0.019 | 0.187 | |
calculateQD_Sm | 2.389 | 0.024 | 2.414 | |
calculateTC | 2.427 | 0.064 | 2.490 | |
calculateTC_Sm | 0.375 | 0.004 | 0.378 | |
corr_plot | 38.216 | 0.415 | 38.638 | |
enrichfindP | 0.407 | 0.057 | 15.516 | |
enrichfind_hp | 0.041 | 0.003 | 1.549 | |
enrichplot | 0.350 | 0.028 | 0.378 | |
filter_missing_values | 0.000 | 0.002 | 0.002 | |
getFASTA | 0.721 | 0.024 | 9.702 | |
getHPI | 0.001 | 0.000 | 0.001 | |
get_negativePPI | 0.003 | 0.000 | 0.002 | |
get_positivePPI | 0.000 | 0.000 | 0.001 | |
impute_missing_data | 0.002 | 0.000 | 0.002 | |
plotPPI | 0.083 | 0.000 | 0.086 | |
pred_ensembel | 18.420 | 0.517 | 16.636 | |
var_imp | 38.415 | 0.692 | 39.108 | |