| Back to Build/check report for BioC 3.17: simplified long |
|
This page was generated on 2023-02-27 02:34:35 -0000 (Mon, 27 Feb 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4259 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the graper package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 842/2169 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.15.0 (landing page) Britta Velten
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
| Package: graper |
| Version: 1.15.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings graper_1.15.0.tar.gz |
| StartedAt: 2023-02-24 12:04:58 -0000 (Fri, 24 Feb 2023) |
| EndedAt: 2023-02-24 12:06:56 -0000 (Fri, 24 Feb 2023) |
| EllapsedTime: 118.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings graper_1.15.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2023-01-14 r83615)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.1 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.15.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
* checking installed package size ... NOTE
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘example_linear.Rmd’ using ‘UTF-8’... OK
‘example_logistic.Rmd’ using ‘UTF-8’... OK
NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.17-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/iterator/iterator_facade.hpp:13,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/range/iterator_range_core.hpp:27,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/lexical_cast.hpp:30,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/tools/convert_from_string.hpp:15,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/constants/constants.hpp:14,
from /home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:20,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/bbs-3.17-bioc/R/library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.17-bioc/R/lib -lRblas -lgfortran -lm -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.831
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.424
ELB improved by 276.407
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.919
ELB improved by 55.5048
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.224
ELB improved by 35.6954
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.035
ELB improved by 17.1893
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.788
ELB improved by 7.24619
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.811
ELB improved by 3.97778
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.591
ELB improved by 3.21954
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.336
ELB improved by 3.25506
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.789
ELB improved by 3.54668
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.942
ELB improved by 3.84699
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.044
ELB improved by 3.8987
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.536
ELB improved by 3.50789
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.783
ELB improved by 2.75328
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.827
ELB improved by 1.95509
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.473
ELB improved by 1.35469
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.504
ELB improved by 0.968515
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.783
ELB improved by 0.721115
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.225
ELB improved by 0.558173
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.773
ELB improved by 0.451555
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.392
ELB improved by 0.381775
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.056
ELB improved by 0.336077
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.748
ELB improved by 0.308016
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.453
ELB improved by 0.29426
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.161
ELB improved by 0.292526
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.86
ELB improved by 0.300983
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.542
ELB improved by 0.318195
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.198
ELB improved by 0.343619
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.819
ELB improved by 0.378459
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.394
ELB improved by 0.425902
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.903
ELB improved by 0.490426
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.327
ELB improved by 0.575843
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.647
ELB improved by 0.680579
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.851
ELB improved by 0.796183
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.926
ELB improved by 0.924708
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.819
ELB improved by 1.10665
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.376
ELB improved by 1.44354
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.384
ELB improved by 1.99148
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.063
ELB improved by 2.32134
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.884
ELB improved by 2.17928
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.067
ELB improved by 1.81645
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.701
ELB improved by 1.36638
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.759
ELB improved by 0.941946
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.136
ELB improved by 0.622469
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.719
ELB improved by 0.417377
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.423
ELB improved by 0.295576
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.202
ELB improved by 0.221533
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.031
ELB improved by 0.171132
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.897
ELB improved by 0.133306
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.793
ELB improved by 0.104654
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.709
ELB improved by 0.0835544
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.641
ELB improved by 0.0680581
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.585
ELB improved by 0.0562666
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.538
ELB improved by 0.0468364
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.499
ELB improved by 0.0390324
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.466
ELB improved by 0.0325299
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.439
ELB improved by 0.0271847
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.416
ELB improved by 0.0228798
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.397
ELB improved by 0.0194697
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.38
ELB improved by 0.0167871
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.365
ELB improved by 0.0146693
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.353
ELB improved by 0.0129774
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.341
ELB improved by 0.0116024
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.33
ELB improved by 0.0104643
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.321
ELB improved by 0.00950529
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-875.523
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.766
ELB improved by 293.757
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.833
ELB improved by 56.9329
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.129
ELB improved by 35.7037
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.937
ELB improved by 16.1921
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.096
ELB improved by 6.84145
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.932
ELB improved by 4.1638
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.393
ELB improved by 3.53859
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.006
ELB improved by 3.38709
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.656
ELB improved by 3.34989
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.398
ELB improved by 3.25863
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.391
ELB improved by 3.00611
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.825
ELB improved by 2.56691
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.806
ELB improved by 2.01834
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.326
ELB improved by 1.48044
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.276
ELB improved by 1.05017
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.52
ELB improved by 0.755262
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.953
ELB improved by 0.567321
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.506
ELB improved by 0.447079
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.14
ELB improved by 0.36616
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.832
ELB improved by 0.308259
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.567
ELB improved by 0.264651
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.336
ELB improved by 0.230489
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.134
ELB improved by 0.202841
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.954
ELB improved by 0.179809
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.794
ELB improved by 0.160129
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.651
ELB improved by 0.142975
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.523
ELB improved by 0.127855
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.408
ELB improved by 0.114509
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.305
ELB improved by 0.102811
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.213
ELB improved by 0.0926705
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.129
ELB improved by 0.0839679
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.052
ELB improved by 0.0765442
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.982
ELB improved by 0.0702165
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.917
ELB improved by 0.0648024
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.857
ELB improved by 0.0601382
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.801
ELB improved by 0.0560865
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.748
ELB improved by 0.0525362
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.699
ELB improved by 0.0493992
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.652
ELB improved by 0.0466061
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.608
ELB improved by 0.0441015
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.567
ELB improved by 0.0418411
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.527
ELB improved by 0.0397887
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.489
ELB improved by 0.0379145
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.453
ELB improved by 0.0361935
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.418
ELB improved by 0.0346049
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.385
ELB improved by 0.0331307
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.353
ELB improved by 0.0317559
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.323
ELB improved by 0.0304676
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.293
ELB improved by 0.0292547
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.265
ELB improved by 0.0281079
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.238
ELB improved by 0.0270194
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.212
ELB improved by 0.0259826
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.187
ELB improved by 0.0249921
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.163
ELB improved by 0.0240434
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.14
ELB improved by 0.0231329
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.118
ELB improved by 0.0222578
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.096
ELB improved by 0.0214159
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.076
ELB improved by 0.0206055
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.056
ELB improved by 0.0198254
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.037
ELB improved by 0.0190747
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.019
ELB improved by 0.0183528
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.001
ELB improved by 0.0176593
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.984
ELB improved by 0.0169939
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.968
ELB improved by 0.0163564
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.952
ELB improved by 0.0157464
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.937
ELB improved by 0.0151639
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.922
ELB improved by 0.0146086
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.908
ELB improved by 0.01408
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.894
ELB improved by 0.0135779
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.881
ELB improved by 0.0131017
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.869
ELB improved by 0.012651
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.856
ELB improved by 0.012225
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.845
ELB improved by 0.011823
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.833
ELB improved by 0.0114444
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.822
ELB improved by 0.0110884
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.811
ELB improved by 0.010754
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.801
ELB improved by 0.0104405
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.791
ELB improved by 0.0101471
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.781
ELB improved by 0.00987283
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-890.108
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.843
ELB improved by 314.265
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.475
ELB improved by 56.3675
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.922
ELB improved by 31.5529
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.928
ELB improved by 12.9941
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.227
ELB improved by 6.70076
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.777
ELB improved by 5.45008
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.301
ELB improved by 5.47679
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.729
ELB improved by 5.57189
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.436
ELB improved by 5.29286
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.915
ELB improved by 4.5213
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.427
ELB improved by 3.488
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.911
ELB improved by 2.51577
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.134
ELB improved by 1.7764
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.858
ELB improved by 1.27624
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.912
ELB improved by 0.945666
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.194
ELB improved by 0.718496
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.636
ELB improved by 0.558244
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.191
ELB improved by 0.445243
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.826
ELB improved by 0.364839
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.52
ELB improved by 0.306069
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.258
ELB improved by 0.261701
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.031
ELB improved by 0.227235
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.831
ELB improved by 0.199851
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.653
ELB improved by 0.177711
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.494
ELB improved by 0.159571
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.349
ELB improved by 0.144553
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.217
ELB improved by 0.13202
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.095
ELB improved by 0.121495
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.983
ELB improved by 0.112617
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.878
ELB improved by 0.105106
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.779
ELB improved by 0.0987429
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.686
ELB improved by 0.0933521
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.597
ELB improved by 0.0887929
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.512
ELB improved by 0.0849507
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.43
ELB improved by 0.0817308
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.351
ELB improved by 0.079054
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.274
ELB improved by 0.0768534
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.199
ELB improved by 0.0750716
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.126
ELB improved by 0.0736588
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.053
ELB improved by 0.072571
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.981
ELB improved by 0.0717695
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.91
ELB improved by 0.0712198
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.839
ELB improved by 0.0708913
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.768
ELB improved by 0.0707577
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.698
ELB improved by 0.0707971
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.627
ELB improved by 0.0709926
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.555
ELB improved by 0.071334
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.483
ELB improved by 0.071819
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.411
ELB improved by 0.0724568
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.338
ELB improved by 0.0732718
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.263
ELB improved by 0.074312
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.188
ELB improved by 0.0756608
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.11
ELB improved by 0.0774592
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.03
ELB improved by 0.0799442
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.947
ELB improved by 0.0835168
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.858
ELB improved by 0.0888595
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.761
ELB improved by 0.0971239
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.651
ELB improved by 0.110163
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.52
ELB improved by 0.130581
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.359
ELB improved by 0.160869
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.159
ELB improved by 0.200544
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.916
ELB improved by 0.242525
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.641
ELB improved by 0.275266
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.348
ELB improved by 0.292788
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.049
ELB improved by 0.298829
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.75
ELB improved by 0.299358
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.297182
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.16
ELB improved by 0.292904
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.873
ELB improved by 0.286662
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.594
ELB improved by 0.278628
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.326
ELB improved by 0.268901
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.068
ELB improved by 0.257371
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.825
ELB improved by 0.243693
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.597
ELB improved by 0.227434
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.389
ELB improved by 0.208436
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.201
ELB improved by 0.187281
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.036
ELB improved by 0.165489
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.891
ELB improved by 0.145151
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.762
ELB improved by 0.12823
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.646
ELB improved by 0.116022
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.538
ELB improved by 0.10897
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.431
ELB improved by 0.106636
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.323
ELB improved by 0.107628
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.214
ELB improved by 0.109472
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.105
ELB improved by 0.108847
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.002
ELB improved by 0.102906
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.911
ELB improved by 0.0913149
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.834
ELB improved by 0.0766096
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.772
ELB improved by 0.062011
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.723
ELB improved by 0.0494094
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.683
ELB improved by 0.0392474
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.652
ELB improved by 0.0312641
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.627
ELB improved by 0.0250346
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.607
ELB improved by 0.0201727
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.591
ELB improved by 0.0163704
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.577
ELB improved by 0.01339
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.566
ELB improved by 0.0110481
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.557
ELB improved by 0.00920337
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-918.162
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.183
ELB improved by 352.979
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.445
ELB improved by 55.7378
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.184
ELB improved by 30.2606
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.305
ELB improved by 10.8795
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.913
ELB improved by 4.39181
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.157
ELB improved by 2.75659
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.995
ELB improved by 2.16172
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.994
ELB improved by 2.00103
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.948
ELB improved by 2.04574
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.756
ELB improved by 2.19225
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.375
ELB improved by 2.3807
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.832
ELB improved by 2.54281
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.253
ELB improved by 2.57909
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.857
ELB improved by 2.39637
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.853
ELB improved by 2.00346
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.317
ELB improved by 1.53638
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.176
ELB improved by 1.14055
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.308
ELB improved by 0.868559
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.608
ELB improved by 0.6995
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.012
ELB improved by 0.596411
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.479
ELB improved by 0.532962
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.983
ELB improved by 0.495928
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.501
ELB improved by 0.482526
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434
ELB improved by 0.500419
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.429
ELB improved by 0.571226
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.705
ELB improved by 0.723596
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.774
ELB improved by 0.931586
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.691
ELB improved by 1.08264
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.561
ELB improved by 1.12967
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.461
ELB improved by 1.10075
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.359
ELB improved by 1.10155
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.121
ELB improved by 1.23776
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.593
ELB improved by 1.52813
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.852
ELB improved by 1.74128
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.192
ELB improved by 1.6597
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.705
ELB improved by 1.48768
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.385
ELB improved by 1.31945
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.255
ELB improved by 1.12968
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.358
ELB improved by 0.897881
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.696
ELB improved by 0.661643
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.225
ELB improved by 0.47064
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.888
ELB improved by 0.337675
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.635
ELB improved by 0.252497
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.433
ELB improved by 0.201608
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.258
ELB improved by 0.175147
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.092
ELB improved by 0.166568
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.923
ELB improved by 0.168704
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.753
ELB improved by 0.169651
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.596
ELB improved by 0.157853
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.461
ELB improved by 0.134494
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.351
ELB improved by 0.110402
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.257
ELB improved by 0.0932052
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.172
ELB improved by 0.0850544
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.087
ELB improved by 0.0856738
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.993
ELB improved by 0.0935573
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.888
ELB improved by 0.105514
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.771
ELB improved by 0.116939
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.647
ELB improved by 0.123885
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.522
ELB improved by 0.124402
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.403
ELB improved by 0.119108
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.291
ELB improved by 0.11243
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.18
ELB improved by 0.110874
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.061
ELB improved by 0.118811
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.926
ELB improved by 0.135219
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.776
ELB improved by 0.150157
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.63
ELB improved by 0.146169
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.512
ELB improved by 0.117847
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.428
ELB improved by 0.0833143
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.369
ELB improved by 0.0595486
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.32
ELB improved by 0.0487202
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.273
ELB improved by 0.0473359
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.22
ELB improved by 0.052406
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.16
ELB improved by 0.0607227
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.093
ELB improved by 0.0663756
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.031
ELB improved by 0.0626022
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.981
ELB improved by 0.0493437
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.948
ELB improved by 0.0339332
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.925
ELB improved by 0.0222609
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.91
ELB improved by 0.0151607
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.899
ELB improved by 0.0112106
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.89
ELB improved by 0.00902442
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.948 0.144 3.075
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.082 | 0.016 | 0.098 | |
| getPIPs | 0.083 | 0.008 | 0.091 | |
| graper | 0.131 | 0.012 | 0.142 | |
| makeExampleData | 0.013 | 0.000 | 0.013 | |
| makeExampleDataWithUnequalGroups | 0.016 | 0.000 | 0.017 | |
| plotELBO | 0.308 | 0.012 | 0.320 | |
| plotGroupPenalties | 1.192 | 0.036 | 1.227 | |
| plotPosterior | 0.738 | 0.027 | 0.766 | |
| predict.graper | 3.194 | 0.027 | 3.224 | |
| print.graper | 0.069 | 0.024 | 0.093 | |