Back to Build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-02-27 02:34:39 -0000 (Mon, 27 Feb 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4259 |
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To the developers/maintainers of the onlineFDR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/onlineFDR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1390/2169 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
onlineFDR 2.7.0 (landing page) David S. Robertson
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
Package: onlineFDR |
Version: 2.7.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL onlineFDR |
StartedAt: 2023-02-23 11:11:57 -0000 (Thu, 23 Feb 2023) |
EndedAt: 2023-02-23 11:13:28 -0000 (Thu, 23 Feb 2023) |
EllapsedTime: 91.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL onlineFDR ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘onlineFDR’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’ g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c addis.cpp -o addis.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c addis_spending.cpp -o addis_spending.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c alphainvesting.cpp -o alphainvesting.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c lond.cpp -o lond.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c londstar.cpp -o londstar.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c lord.cpp -o lord.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c lordstar.cpp -o lordstar.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c online_fallback.cpp -o online_fallback.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c saffron.cpp -o saffron.o g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R/library/RcppProgress/include' -I/usr/local/include -fPIC -g -O2 -Wall -c saffronstar.cpp -o saffronstar.o g++ -std=gnu++14 -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o onlineFDR.so RcppExports.o addis.o addis_spending.o alphainvesting.o lond.o londstar.o lord.o lordstar.o online_fallback.o saffron.o saffronstar.o -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-onlineFDR/00new/onlineFDR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ℹ Using R 4.3.0 (lockfile was generated with R 4.2.0) Warning message: This project is configured to use Bioconductor '3.16', which is not compatible with R '4.3.0'. Use 'renv::init(bioconductor = TRUE)' to re-initialize this project with the latest Bioconductor release. ** help *** installing help indices *** copying figures ** building package indices ℹ Using R 4.3.0 (lockfile was generated with R 4.2.0) Warning message: This project is configured to use Bioconductor '3.16', which is not compatible with R '4.3.0'. Use 'renv::init(bioconductor = TRUE)' to re-initialize this project with the latest Bioconductor release. ** installing vignettes ** testing if installed package can be loaded from temporary location ℹ Using R 4.3.0 (lockfile was generated with R 4.2.0) Warning message: This project is configured to use Bioconductor '3.16', which is not compatible with R '4.3.0'. Use 'renv::init(bioconductor = TRUE)' to re-initialize this project with the latest Bioconductor release. ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ℹ Using R 4.3.0 (lockfile was generated with R 4.2.0) Warning message: This project is configured to use Bioconductor '3.16', which is not compatible with R '4.3.0'. Use 'renv::init(bioconductor = TRUE)' to re-initialize this project with the latest Bioconductor release. ** testing if installed package keeps a record of temporary installation path * DONE (onlineFDR)