| Back to Build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-03-01 07:38:38 -0000 (Wed, 01 Mar 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4266 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the CNAnorm package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNAnorm.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 356/2171 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CNAnorm 1.45.0 (landing page) Stefano Berri
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
| Package: CNAnorm |
| Version: 1.45.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL CNAnorm |
| StartedAt: 2023-02-27 09:38:23 -0000 (Mon, 27 Feb 2023) |
| EndedAt: 2023-02-27 09:38:41 -0000 (Mon, 27 Feb 2023) |
| EllapsedTime: 18.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL CNAnorm
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘CNAnorm’ ...
** using staged installation
** libs
using Fortran compiler: ‘GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gfortran -fPIC -g -O2 -Wall -c daxpy.f -o daxpy.o
gfortran -fPIC -g -O2 -Wall -c ddot.f -o ddot.o
gfortran -fPIC -g -O2 -Wall -c dgbfa.f -o dgbfa.o
gfortran -fPIC -g -O2 -Wall -c dgbsl.f -o dgbsl.o
gfortran -fPIC -g -O2 -Wall -c dscal.f -o dscal.o
gfortran -fPIC -g -O2 -Wall -c dsmooth.f -o dsmooth.o
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dsmooth.f:62:21:
62 | do 10 i=1,n-1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
dsmooth.f:70:8:
70 | & diff(i-1)*diff(i+1) .lt. 0.) isplit(i)=1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
dsmooth.f:50:6:
50 | function amed3(a,b,c)
| ^
Warning: ‘__result_amed3’ may be used uninitialized in this function [-Wmaybe-uninitialized]
gfortran -fPIC -g -O2 -Wall -c idamax.f -o idamax.o
gcc -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o CNAnorm.so daxpy.o ddot.o dgbfa.o dgbsl.o dscal.o dsmooth.o idamax.o -lgfortran -lm -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/library/00LOCK-CNAnorm/00new/CNAnorm/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNAnorm)