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This page was generated on 2023-03-01 07:38:41 -0000 (Wed, 01 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4266
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BUILD results for GeneGA on kunpeng1


To the developers/maintainers of the GeneGA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneGA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 748/2171HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneGA 1.49.0  (landing page)
Zhenpeng Li
Snapshot Date: 2023-02-27 07:53:22 -0000 (Mon, 27 Feb 2023)
git_url: https://git.bioconductor.org/packages/GeneGA
git_branch: master
git_last_commit: 8875d3f
git_last_commit_date: 2022-11-01 15:05:22 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: GeneGA
Version: 1.49.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GeneGA
StartedAt: 2023-02-27 13:48:26 -0000 (Mon, 27 Feb 2023)
EndedAt: 2023-02-27 13:48:32 -0000 (Mon, 27 Feb 2023)
EllapsedTime: 6.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data GeneGA
###
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* checking for file ‘GeneGA/DESCRIPTION’ ... OK
* preparing ‘GeneGA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GeneGA.Rnw’ using Sweave
Loading required package: seqinr
Loading required package: hash
hash-2.2.6.2 provided by Decision Patterns

sh: 1: RNAfold: not found

Error: processing vignette 'GeneGA.Rnw' failed with diagnostics:
 chunk 3 
Error in system(paste("echo ", x, "|RNAfold", sep = ""), intern = T) : 
  error in running command

--- failed re-building ‘GeneGA.Rnw’

SUMMARY: processing the following file failed:
  ‘GeneGA.Rnw’

Error: Vignette re-building failed.
Execution halted