Back to Build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-03-01 07:38:42 -0000 (Wed, 01 Mar 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4266 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 915/2171 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.5.0 (landing page) Matineh Rahmatbakhsh
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz |
StartedAt: 2023-02-28 05:50:21 -0000 (Tue, 28 Feb 2023) |
EndedAt: 2023-02-28 06:06:35 -0000 (Tue, 28 Feb 2023) |
EllapsedTime: 974.3 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings HPiP_1.5.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck’ * using R Under development (unstable) (2023-01-14 r83615) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.1 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 39.834 0.912 40.748 corr_plot 37.970 0.459 38.432 FSmethod 37.751 0.581 38.332 pred_ensembel 18.026 0.304 15.995 getFASTA 0.848 0.004 8.634 enrichfindP 0.421 0.033 16.104 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 109.789517 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 101.339109 iter 10 value 88.331805 final value 87.862820 converged Fitting Repeat 3 # weights: 103 initial value 94.964940 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 104.240999 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 110.742329 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 103.891803 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 109.829226 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 114.799285 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 106.125547 iter 10 value 94.038442 final value 94.038251 converged Fitting Repeat 5 # weights: 305 initial value 115.140186 final value 94.038251 converged Fitting Repeat 1 # weights: 507 initial value 96.373988 iter 10 value 91.250977 iter 20 value 89.606791 iter 30 value 89.600055 final value 89.600000 converged Fitting Repeat 2 # weights: 507 initial value 106.540886 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 116.685983 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 123.013742 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 100.451338 iter 10 value 93.618796 iter 20 value 91.644231 iter 30 value 91.317240 iter 40 value 91.313737 iter 50 value 91.309279 final value 91.309261 converged Fitting Repeat 1 # weights: 103 initial value 113.593822 iter 10 value 93.794766 iter 20 value 85.306561 iter 30 value 84.204774 iter 40 value 84.007250 iter 50 value 83.941001 final value 83.940995 converged Fitting Repeat 2 # weights: 103 initial value 98.223411 iter 10 value 94.059089 iter 20 value 94.056398 iter 30 value 92.240933 iter 40 value 91.820195 iter 50 value 86.123076 iter 60 value 84.989921 iter 70 value 83.673972 iter 80 value 83.323116 iter 90 value 83.229952 iter 100 value 82.996956 final value 82.996956 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 98.359178 iter 10 value 94.056980 iter 20 value 93.886545 iter 30 value 93.352917 iter 40 value 88.560878 iter 50 value 86.834107 iter 60 value 86.587961 iter 70 value 86.577683 final value 86.577674 converged Fitting Repeat 4 # weights: 103 initial value 104.642079 iter 10 value 94.029674 iter 20 value 93.000932 iter 30 value 91.431398 iter 40 value 91.344949 iter 50 value 85.801094 iter 60 value 84.934593 iter 70 value 84.818679 iter 80 value 84.720722 iter 90 value 83.493638 iter 100 value 82.671470 final value 82.671470 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 102.666993 iter 10 value 93.997132 iter 20 value 91.012671 iter 30 value 89.327321 iter 40 value 86.029509 iter 50 value 84.534226 iter 60 value 83.817643 final value 83.800250 converged Fitting Repeat 1 # weights: 305 initial value 120.358758 iter 10 value 94.003842 iter 20 value 91.176260 iter 30 value 87.779909 iter 40 value 84.568435 iter 50 value 82.914244 iter 60 value 82.274340 iter 70 value 81.939067 iter 80 value 81.718826 iter 90 value 81.577851 iter 100 value 81.503607 final value 81.503607 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.046518 iter 10 value 97.929802 iter 20 value 91.319367 iter 30 value 86.290148 iter 40 value 85.968289 iter 50 value 85.720547 iter 60 value 85.493584 iter 70 value 84.891633 iter 80 value 82.800102 iter 90 value 81.508801 iter 100 value 80.949605 final value 80.949605 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.309089 iter 10 value 91.680350 iter 20 value 86.259014 iter 30 value 85.776343 iter 40 value 83.471586 iter 50 value 82.367178 iter 60 value 82.068489 iter 70 value 81.874144 iter 80 value 81.744738 iter 90 value 81.719755 iter 100 value 81.590751 final value 81.590751 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 112.766733 iter 10 value 94.017769 iter 20 value 92.713266 iter 30 value 85.352117 iter 40 value 84.884048 iter 50 value 84.585915 iter 60 value 83.901358 iter 70 value 83.435244 iter 80 value 83.278436 iter 90 value 83.030221 iter 100 value 82.702541 final value 82.702541 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 111.094006 iter 10 value 94.069409 iter 20 value 86.088785 iter 30 value 85.020114 iter 40 value 84.086037 iter 50 value 82.194678 iter 60 value 81.825448 iter 70 value 81.384646 iter 80 value 81.265130 iter 90 value 81.193431 iter 100 value 81.105207 final value 81.105207 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 114.960659 iter 10 value 94.088279 iter 20 value 93.808710 iter 30 value 90.998767 iter 40 value 85.810421 iter 50 value 84.366128 iter 60 value 84.095767 iter 70 value 83.452159 iter 80 value 83.287202 iter 90 value 82.930369 iter 100 value 82.075558 final value 82.075558 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 114.154629 iter 10 value 93.880281 iter 20 value 87.883704 iter 30 value 85.332105 iter 40 value 83.549834 iter 50 value 83.068765 iter 60 value 82.874546 iter 70 value 82.532580 iter 80 value 82.265738 iter 90 value 81.908446 iter 100 value 81.769606 final value 81.769606 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 120.995217 iter 10 value 94.023555 iter 20 value 87.748192 iter 30 value 86.636795 iter 40 value 83.005603 iter 50 value 82.225475 iter 60 value 81.774823 iter 70 value 81.392180 iter 80 value 81.339696 iter 90 value 81.226475 iter 100 value 81.201966 final value 81.201966 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.221497 iter 10 value 93.955617 iter 20 value 89.316504 iter 30 value 87.590955 iter 40 value 86.119445 iter 50 value 83.973087 iter 60 value 83.601217 iter 70 value 83.386261 iter 80 value 83.219058 iter 90 value 83.128585 iter 100 value 82.746939 final value 82.746939 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.602549 iter 10 value 94.166311 iter 20 value 92.960530 iter 30 value 92.127885 iter 40 value 91.277265 iter 50 value 90.096840 iter 60 value 87.646624 iter 70 value 85.342982 iter 80 value 83.874640 iter 90 value 83.209869 iter 100 value 82.654212 final value 82.654212 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.527169 iter 10 value 94.054705 final value 94.052931 converged Fitting Repeat 2 # weights: 103 initial value 94.877053 final value 94.054572 converged Fitting Repeat 3 # weights: 103 initial value 96.725059 final value 94.054164 converged Fitting Repeat 4 # weights: 103 initial value 101.205434 final value 94.054500 converged Fitting Repeat 5 # weights: 103 initial value 94.658430 iter 10 value 91.945410 iter 20 value 91.927451 iter 30 value 91.927012 iter 40 value 88.568365 iter 50 value 88.557947 iter 60 value 88.556427 iter 70 value 88.395332 iter 80 value 88.394251 iter 90 value 88.383783 iter 100 value 87.617381 final value 87.617381 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 120.773561 iter 10 value 94.057762 iter 20 value 94.053147 iter 30 value 93.062120 iter 40 value 93.056967 final value 93.056962 converged Fitting Repeat 2 # weights: 305 initial value 94.892151 iter 10 value 94.042955 iter 20 value 93.434230 iter 30 value 87.413639 iter 40 value 85.909069 iter 50 value 85.906281 iter 60 value 85.905712 iter 70 value 85.759633 iter 80 value 82.357405 iter 90 value 82.056391 iter 100 value 81.932979 final value 81.932979 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.665365 iter 10 value 94.058002 iter 20 value 93.568754 iter 30 value 88.171978 iter 40 value 88.164947 final value 88.164901 converged Fitting Repeat 4 # weights: 305 initial value 96.874839 iter 10 value 92.447781 iter 20 value 91.787193 iter 30 value 91.629283 iter 40 value 91.628569 iter 50 value 91.627824 iter 60 value 87.273676 iter 70 value 85.541968 iter 80 value 85.536058 final value 85.535956 converged Fitting Repeat 5 # weights: 305 initial value 106.160001 iter 10 value 94.057606 iter 20 value 93.956408 iter 30 value 90.158621 iter 40 value 89.051179 iter 50 value 87.298496 iter 60 value 87.288661 iter 70 value 85.642030 iter 80 value 85.504982 iter 90 value 85.474091 iter 100 value 85.464843 final value 85.464843 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.520258 iter 10 value 94.061479 iter 20 value 94.050162 iter 30 value 94.046390 iter 40 value 92.470734 iter 50 value 85.427018 iter 60 value 85.424170 iter 70 value 85.422754 iter 80 value 84.655034 iter 90 value 84.080841 iter 100 value 83.480333 final value 83.480333 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.683290 iter 10 value 93.590836 iter 20 value 90.012722 iter 30 value 86.973025 iter 40 value 83.500551 iter 50 value 81.985793 iter 60 value 81.886747 iter 70 value 81.886383 final value 81.885427 converged Fitting Repeat 3 # weights: 507 initial value 103.275516 iter 10 value 94.061566 iter 20 value 93.925726 iter 30 value 91.441808 iter 40 value 86.011529 iter 50 value 85.358692 iter 60 value 85.351255 iter 70 value 85.347847 iter 80 value 85.334014 iter 90 value 82.522886 iter 100 value 81.847292 final value 81.847292 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 97.708623 iter 10 value 86.414618 iter 20 value 85.665091 iter 30 value 85.604283 iter 40 value 85.603071 iter 50 value 85.602253 iter 60 value 85.601315 iter 70 value 85.594748 iter 80 value 85.578065 iter 90 value 85.577850 iter 100 value 85.576400 final value 85.576400 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.267880 iter 10 value 93.999333 iter 20 value 93.992062 iter 30 value 93.413757 iter 40 value 91.083530 iter 50 value 91.013296 iter 60 value 90.574058 iter 70 value 90.390900 final value 90.390654 converged Fitting Repeat 1 # weights: 103 initial value 102.804635 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.052878 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 106.250774 iter 10 value 94.485090 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 102.969390 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.708279 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 109.726242 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 98.350178 iter 10 value 94.354397 iter 10 value 94.354396 iter 10 value 94.354396 final value 94.354396 converged Fitting Repeat 3 # weights: 305 initial value 112.809853 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 116.218228 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 117.896775 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 100.962900 final value 94.354396 converged Fitting Repeat 2 # weights: 507 initial value 98.030547 iter 10 value 94.488339 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 145.280759 iter 10 value 94.354396 iter 10 value 94.354396 iter 10 value 94.354396 final value 94.354396 converged Fitting Repeat 4 # weights: 507 initial value 115.668032 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 99.688241 iter 10 value 86.991906 iter 20 value 81.177827 iter 30 value 80.226816 iter 40 value 80.001237 iter 50 value 79.664035 iter 60 value 79.297616 iter 70 value 79.275713 iter 80 value 79.270308 iter 90 value 79.269573 final value 79.269532 converged Fitting Repeat 1 # weights: 103 initial value 105.161684 iter 10 value 94.896006 iter 20 value 94.488414 iter 30 value 94.473692 iter 40 value 92.454871 iter 50 value 82.579604 iter 60 value 82.351776 iter 70 value 81.799440 iter 80 value 81.614824 iter 90 value 81.428418 iter 100 value 81.398982 final value 81.398982 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 103.368084 iter 10 value 93.756477 iter 20 value 86.170371 iter 30 value 84.857155 iter 40 value 82.344743 iter 50 value 80.712071 iter 60 value 80.391520 iter 70 value 79.986053 iter 80 value 79.812018 iter 90 value 79.719925 iter 100 value 79.687218 final value 79.687218 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 110.468043 iter 10 value 94.417568 iter 20 value 93.931277 iter 30 value 93.910016 iter 40 value 92.855917 iter 50 value 89.027625 iter 60 value 87.340033 iter 70 value 87.068886 iter 80 value 81.547366 iter 90 value 81.006360 iter 100 value 80.634456 final value 80.634456 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 97.302515 iter 10 value 94.448718 iter 20 value 87.591993 iter 30 value 83.184799 iter 40 value 82.392658 iter 50 value 81.634548 iter 60 value 81.584035 iter 70 value 81.470466 iter 80 value 81.408300 iter 90 value 81.399750 final value 81.399530 converged Fitting Repeat 5 # weights: 103 initial value 97.292185 iter 10 value 94.488493 iter 20 value 93.961043 iter 30 value 93.925819 iter 40 value 93.279931 iter 50 value 87.007467 iter 60 value 84.153107 iter 70 value 83.932829 iter 80 value 83.899830 iter 90 value 83.842028 iter 100 value 83.611831 final value 83.611831 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 107.230884 iter 10 value 94.335595 iter 20 value 88.587596 iter 30 value 86.193974 iter 40 value 85.620340 iter 50 value 82.084150 iter 60 value 81.138576 iter 70 value 80.689507 iter 80 value 80.067281 iter 90 value 78.371874 iter 100 value 78.248634 final value 78.248634 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 131.284760 iter 10 value 94.486936 iter 20 value 94.181117 iter 30 value 89.846741 iter 40 value 88.574699 iter 50 value 86.201647 iter 60 value 82.952134 iter 70 value 82.447912 iter 80 value 80.174285 iter 90 value 79.270733 iter 100 value 78.609546 final value 78.609546 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 114.266952 iter 10 value 94.994767 iter 20 value 87.327850 iter 30 value 84.188814 iter 40 value 83.908415 iter 50 value 83.133233 iter 60 value 81.002111 iter 70 value 79.935398 iter 80 value 79.621040 iter 90 value 79.494572 iter 100 value 79.115818 final value 79.115818 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.243397 iter 10 value 94.368179 iter 20 value 90.233120 iter 30 value 85.564903 iter 40 value 84.900847 iter 50 value 83.117635 iter 60 value 80.700119 iter 70 value 79.692655 iter 80 value 79.436273 iter 90 value 79.278539 iter 100 value 79.194793 final value 79.194793 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.967913 iter 10 value 94.497463 iter 20 value 93.023798 iter 30 value 87.784959 iter 40 value 84.965424 iter 50 value 81.865952 iter 60 value 81.040357 iter 70 value 80.688857 iter 80 value 80.350003 iter 90 value 79.935222 iter 100 value 79.299881 final value 79.299881 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 102.770015 iter 10 value 90.143459 iter 20 value 86.998346 iter 30 value 86.681893 iter 40 value 86.547398 iter 50 value 85.264871 iter 60 value 81.520457 iter 70 value 79.943564 iter 80 value 79.538175 iter 90 value 79.013568 iter 100 value 78.415399 final value 78.415399 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 115.796596 iter 10 value 94.502339 iter 20 value 92.277168 iter 30 value 82.071946 iter 40 value 81.658685 iter 50 value 81.228265 iter 60 value 80.060130 iter 70 value 79.392344 iter 80 value 79.139032 iter 90 value 78.752051 iter 100 value 78.117469 final value 78.117469 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 124.691112 iter 10 value 93.439662 iter 20 value 85.277292 iter 30 value 83.120523 iter 40 value 82.158807 iter 50 value 81.910720 iter 60 value 81.003390 iter 70 value 80.727983 iter 80 value 79.971301 iter 90 value 78.958133 iter 100 value 78.639430 final value 78.639430 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.897224 iter 10 value 83.821689 iter 20 value 79.818310 iter 30 value 78.818821 iter 40 value 78.229660 iter 50 value 77.981714 iter 60 value 77.914970 iter 70 value 77.694464 iter 80 value 77.522500 iter 90 value 77.443714 iter 100 value 77.427832 final value 77.427832 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.713191 iter 10 value 94.351969 iter 20 value 85.891668 iter 30 value 84.864320 iter 40 value 82.672199 iter 50 value 80.573457 iter 60 value 80.045728 iter 70 value 79.851751 iter 80 value 79.396043 iter 90 value 79.052799 iter 100 value 78.829477 final value 78.829477 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.139742 final value 94.356166 converged Fitting Repeat 2 # weights: 103 initial value 100.783681 iter 10 value 94.485748 iter 20 value 94.484225 iter 20 value 94.484224 iter 20 value 94.484224 final value 94.484224 converged Fitting Repeat 3 # weights: 103 initial value 94.803533 final value 94.485967 converged Fitting Repeat 4 # weights: 103 initial value 99.241501 final value 94.485690 converged Fitting Repeat 5 # weights: 103 initial value 96.844345 iter 10 value 94.485826 iter 20 value 94.298284 iter 30 value 89.284888 iter 40 value 88.288202 iter 50 value 86.589732 iter 60 value 82.227984 iter 70 value 81.965511 iter 80 value 81.958700 iter 90 value 81.851731 iter 100 value 81.807895 final value 81.807895 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 95.821219 iter 10 value 94.488630 iter 20 value 94.466263 iter 30 value 89.066698 iter 40 value 80.660548 iter 50 value 80.576704 iter 60 value 80.553954 iter 70 value 80.547475 iter 80 value 80.539992 iter 90 value 80.528656 iter 100 value 80.520814 final value 80.520814 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 110.404992 iter 10 value 94.489260 iter 20 value 94.469672 iter 30 value 88.230813 iter 40 value 82.168843 iter 50 value 81.057798 iter 60 value 81.052948 final value 81.052499 converged Fitting Repeat 3 # weights: 305 initial value 94.757408 iter 10 value 88.755673 iter 20 value 87.623490 iter 30 value 87.596816 iter 40 value 87.511724 iter 50 value 86.996696 iter 60 value 86.987812 final value 86.987322 converged Fitting Repeat 4 # weights: 305 initial value 96.845498 iter 10 value 94.489110 iter 20 value 94.475451 iter 30 value 84.116062 iter 40 value 82.512914 iter 50 value 82.086890 iter 60 value 81.990830 iter 70 value 81.987796 iter 80 value 81.987713 final value 81.987165 converged Fitting Repeat 5 # weights: 305 initial value 97.543167 iter 10 value 94.358871 iter 20 value 94.202036 iter 30 value 93.873166 iter 40 value 93.871657 iter 40 value 93.871656 iter 40 value 93.871656 final value 93.871656 converged Fitting Repeat 1 # weights: 507 initial value 97.248154 iter 10 value 94.321177 iter 20 value 94.316408 iter 30 value 94.308082 final value 94.307592 converged Fitting Repeat 2 # weights: 507 initial value 95.953988 iter 10 value 94.319807 iter 20 value 90.181180 iter 30 value 87.090098 iter 40 value 87.063057 iter 50 value 86.170888 final value 86.018947 converged Fitting Repeat 3 # weights: 507 initial value 98.787563 iter 10 value 94.492092 iter 20 value 94.431033 iter 30 value 93.865271 iter 40 value 93.839129 iter 50 value 93.838975 final value 93.838960 converged Fitting Repeat 4 # weights: 507 initial value 149.123773 iter 10 value 96.406168 iter 20 value 94.012531 iter 30 value 94.005346 iter 40 value 93.010498 iter 50 value 87.479516 iter 60 value 83.534902 iter 70 value 82.808288 iter 80 value 82.805080 final value 82.805013 converged Fitting Repeat 5 # weights: 507 initial value 97.650866 iter 10 value 94.155979 iter 20 value 92.227313 iter 30 value 92.205721 iter 40 value 92.005799 iter 50 value 91.978605 iter 60 value 91.972615 iter 60 value 91.972615 final value 91.972612 converged Fitting Repeat 1 # weights: 103 initial value 94.781615 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.166606 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 112.023196 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 102.074782 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.422817 final value 94.275362 converged Fitting Repeat 1 # weights: 305 initial value 103.628102 final value 94.088889 converged Fitting Repeat 2 # weights: 305 initial value 122.838604 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 105.329776 iter 10 value 86.990045 iter 20 value 85.600786 final value 85.600081 converged Fitting Repeat 4 # weights: 305 initial value 107.166084 iter 10 value 94.484211 iter 10 value 94.484211 iter 10 value 94.484211 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 107.542245 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 100.858269 iter 10 value 87.883525 iter 20 value 86.137182 iter 30 value 86.133349 final value 86.133335 converged Fitting Repeat 2 # weights: 507 initial value 97.734915 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 97.544190 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 100.334169 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 99.070600 final value 94.275362 converged Fitting Repeat 1 # weights: 103 initial value 96.172434 iter 10 value 94.288755 iter 20 value 91.240264 iter 30 value 84.230823 iter 40 value 81.561998 iter 50 value 80.955294 iter 60 value 80.320300 iter 70 value 79.978318 iter 80 value 79.972317 iter 90 value 79.927756 iter 100 value 79.897071 final value 79.897071 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 96.689688 iter 10 value 94.421163 iter 20 value 94.356649 iter 30 value 86.902226 iter 40 value 82.877730 iter 50 value 81.875854 iter 60 value 81.475960 iter 70 value 80.496176 iter 80 value 79.973963 final value 79.973061 converged Fitting Repeat 3 # weights: 103 initial value 109.674891 iter 10 value 94.486558 iter 20 value 94.213869 iter 30 value 94.078687 iter 40 value 92.550766 iter 50 value 83.910727 iter 60 value 82.715343 iter 70 value 81.614004 iter 80 value 81.292495 iter 90 value 81.265380 iter 100 value 80.382764 final value 80.382764 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 110.961813 iter 10 value 94.440632 iter 20 value 92.689302 iter 30 value 83.884640 iter 40 value 83.516053 iter 50 value 82.280755 iter 60 value 81.738535 iter 70 value 81.492682 iter 80 value 81.369956 iter 90 value 81.342230 iter 100 value 81.278130 final value 81.278130 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 115.273301 iter 10 value 94.429359 iter 20 value 93.049299 iter 30 value 91.537487 iter 40 value 85.630254 iter 50 value 84.188297 iter 60 value 81.953552 iter 70 value 80.808959 iter 80 value 80.774365 iter 90 value 80.764204 iter 100 value 80.049626 final value 80.049626 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 113.845471 iter 10 value 94.822860 iter 20 value 94.286102 iter 30 value 88.710383 iter 40 value 85.432836 iter 50 value 83.038736 iter 60 value 82.722054 iter 70 value 81.566324 iter 80 value 79.869802 iter 90 value 79.082945 iter 100 value 78.497669 final value 78.497669 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 110.014702 iter 10 value 94.746723 iter 20 value 83.416683 iter 30 value 81.102103 iter 40 value 80.820070 iter 50 value 80.776735 iter 60 value 80.730995 iter 70 value 80.252772 iter 80 value 80.010604 iter 90 value 79.316195 iter 100 value 78.717664 final value 78.717664 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 114.219669 iter 10 value 93.870025 iter 20 value 86.618206 iter 30 value 81.482082 iter 40 value 80.107658 iter 50 value 79.203088 iter 60 value 78.834169 iter 70 value 78.358516 iter 80 value 78.336954 iter 90 value 78.335661 final value 78.335137 converged Fitting Repeat 4 # weights: 305 initial value 106.656617 iter 10 value 94.563000 iter 20 value 94.257172 iter 30 value 83.286441 iter 40 value 82.029151 iter 50 value 81.252264 iter 60 value 80.483336 iter 70 value 80.041211 iter 80 value 78.995353 iter 90 value 78.281737 iter 100 value 78.190993 final value 78.190993 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.322030 iter 10 value 94.420234 iter 20 value 87.223467 iter 30 value 85.430947 iter 40 value 82.532812 iter 50 value 81.961929 iter 60 value 80.723320 iter 70 value 80.225155 iter 80 value 79.374561 iter 90 value 78.636662 iter 100 value 78.241737 final value 78.241737 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.572899 iter 10 value 94.835470 iter 20 value 92.599615 iter 30 value 87.433463 iter 40 value 83.285709 iter 50 value 81.999680 iter 60 value 80.944519 iter 70 value 80.165144 iter 80 value 79.514665 iter 90 value 78.923948 iter 100 value 78.530683 final value 78.530683 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 117.627533 iter 10 value 94.923941 iter 20 value 91.446058 iter 30 value 86.376481 iter 40 value 82.207171 iter 50 value 80.474635 iter 60 value 78.622867 iter 70 value 78.226560 iter 80 value 77.810384 iter 90 value 77.557504 iter 100 value 77.469012 final value 77.469012 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 130.480687 iter 10 value 97.060125 iter 20 value 91.977523 iter 30 value 90.942467 iter 40 value 84.777272 iter 50 value 84.101169 iter 60 value 79.297726 iter 70 value 78.093405 iter 80 value 77.811779 iter 90 value 77.686802 iter 100 value 77.593811 final value 77.593811 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 119.252886 iter 10 value 93.632753 iter 20 value 87.601752 iter 30 value 83.917828 iter 40 value 82.574163 iter 50 value 80.169198 iter 60 value 79.298242 iter 70 value 78.555714 iter 80 value 78.291499 iter 90 value 78.117793 iter 100 value 77.953564 final value 77.953564 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.368723 iter 10 value 94.066112 iter 20 value 84.290393 iter 30 value 83.098229 iter 40 value 82.687272 iter 50 value 81.396623 iter 60 value 81.090552 iter 70 value 80.984886 iter 80 value 80.644204 iter 90 value 79.903671 iter 100 value 79.628203 final value 79.628203 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.382907 final value 94.485928 converged Fitting Repeat 2 # weights: 103 initial value 101.523006 final value 94.485916 converged Fitting Repeat 3 # weights: 103 initial value 95.741175 final value 94.485986 converged Fitting Repeat 4 # weights: 103 initial value 104.159246 final value 94.485875 converged Fitting Repeat 5 # weights: 103 initial value 96.573820 iter 10 value 94.090703 iter 20 value 94.089246 iter 30 value 92.076385 iter 40 value 88.677973 iter 50 value 88.675416 iter 60 value 88.350397 iter 70 value 88.342324 iter 80 value 85.238117 iter 90 value 85.237681 iter 100 value 85.237323 final value 85.237323 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 99.871790 iter 10 value 94.280303 iter 20 value 94.275799 iter 30 value 82.865861 iter 40 value 81.904475 iter 50 value 81.653635 final value 81.653603 converged Fitting Repeat 2 # weights: 305 initial value 112.353187 iter 10 value 94.489236 iter 20 value 94.401485 final value 94.112707 converged Fitting Repeat 3 # weights: 305 initial value 102.352840 iter 10 value 94.487110 iter 20 value 94.426385 iter 30 value 94.053398 iter 40 value 93.666484 iter 50 value 81.913097 iter 60 value 81.657418 iter 70 value 81.653794 final value 81.653620 converged Fitting Repeat 4 # weights: 305 initial value 96.899286 iter 10 value 81.026347 iter 20 value 80.507872 iter 30 value 79.494412 iter 40 value 79.138211 iter 50 value 78.968176 iter 60 value 78.964745 iter 70 value 78.926998 iter 80 value 78.874310 iter 90 value 78.845113 iter 100 value 78.844489 final value 78.844489 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 105.859617 iter 10 value 94.489035 iter 20 value 94.479318 iter 30 value 84.926316 final value 83.229986 converged Fitting Repeat 1 # weights: 507 initial value 103.213442 iter 10 value 94.482314 iter 20 value 94.468781 iter 30 value 93.593633 iter 40 value 83.390170 iter 50 value 83.266955 iter 60 value 83.266267 final value 83.266218 converged Fitting Repeat 2 # weights: 507 initial value 108.468749 iter 10 value 94.492503 iter 20 value 94.470710 iter 30 value 93.125566 iter 40 value 85.330296 iter 50 value 83.248035 iter 60 value 83.247862 iter 70 value 81.882755 iter 80 value 81.634356 iter 90 value 81.633705 iter 100 value 81.633067 final value 81.633067 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.934527 iter 10 value 92.941943 iter 20 value 81.885702 iter 30 value 81.737576 iter 40 value 81.639034 iter 50 value 81.638687 iter 60 value 81.174648 iter 70 value 80.984423 iter 80 value 80.980846 iter 90 value 80.757906 final value 80.673378 converged Fitting Repeat 4 # weights: 507 initial value 104.208668 iter 10 value 94.314162 iter 20 value 93.879880 iter 30 value 84.094247 iter 40 value 82.848093 iter 50 value 80.961141 iter 60 value 80.726108 final value 80.721740 converged Fitting Repeat 5 # weights: 507 initial value 94.580766 iter 10 value 94.414050 iter 20 value 94.298820 iter 30 value 94.280616 iter 40 value 94.267127 iter 50 value 86.227930 iter 60 value 85.242928 iter 70 value 82.173434 iter 80 value 78.312915 iter 90 value 77.866323 iter 100 value 77.794276 final value 77.794276 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.994333 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.760341 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 96.245118 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 101.113768 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.674846 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 106.273018 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 95.329382 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 98.204894 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 107.055629 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 94.724211 iter 10 value 86.095510 iter 20 value 85.988325 final value 85.988096 converged Fitting Repeat 1 # weights: 507 initial value 102.258384 final value 94.484210 converged Fitting Repeat 2 # weights: 507 initial value 126.706139 final value 94.400000 converged Fitting Repeat 3 # weights: 507 initial value 116.818276 final value 94.467391 converged Fitting Repeat 4 # weights: 507 initial value 104.136793 iter 10 value 94.022728 iter 10 value 94.022727 iter 10 value 94.022727 final value 94.022727 converged Fitting Repeat 5 # weights: 507 initial value 95.218862 final value 94.430233 converged Fitting Repeat 1 # weights: 103 initial value 99.436770 iter 10 value 94.480123 iter 20 value 90.390015 iter 30 value 89.078612 iter 40 value 87.455972 iter 50 value 84.889153 iter 60 value 84.367160 iter 70 value 84.300746 final value 84.300744 converged Fitting Repeat 2 # weights: 103 initial value 100.025302 iter 10 value 91.824736 iter 20 value 86.392032 iter 30 value 85.970593 iter 40 value 85.818347 iter 50 value 84.505822 iter 60 value 83.957212 iter 70 value 83.783441 iter 80 value 83.383895 iter 90 value 83.230721 final value 83.228844 converged Fitting Repeat 3 # weights: 103 initial value 102.804204 iter 10 value 94.384081 iter 20 value 88.338945 iter 30 value 86.612869 iter 40 value 85.703813 iter 50 value 84.853667 iter 60 value 84.682738 final value 84.677997 converged Fitting Repeat 4 # weights: 103 initial value 104.143075 iter 10 value 94.489467 iter 20 value 93.642341 iter 30 value 87.115730 iter 40 value 84.699273 iter 50 value 83.631137 iter 60 value 83.521220 iter 70 value 83.435108 iter 80 value 83.305832 iter 90 value 83.228862 final value 83.228844 converged Fitting Repeat 5 # weights: 103 initial value 97.582903 iter 10 value 91.874894 iter 20 value 91.409952 iter 30 value 90.907885 iter 40 value 90.691137 final value 90.689153 converged Fitting Repeat 1 # weights: 305 initial value 104.668937 iter 10 value 94.160108 iter 20 value 89.530944 iter 30 value 85.564545 iter 40 value 84.611674 iter 50 value 83.664862 iter 60 value 82.378357 iter 70 value 81.278475 iter 80 value 80.934222 iter 90 value 80.415589 iter 100 value 80.143832 final value 80.143832 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 114.739809 iter 10 value 94.054341 iter 20 value 91.795486 iter 30 value 91.284502 iter 40 value 90.914236 iter 50 value 90.219405 iter 60 value 85.722713 iter 70 value 83.374237 iter 80 value 81.381389 iter 90 value 81.181780 iter 100 value 80.912965 final value 80.912965 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.811013 iter 10 value 94.508467 iter 20 value 94.494111 iter 30 value 92.946610 iter 40 value 89.166965 iter 50 value 87.825229 iter 60 value 87.075965 iter 70 value 85.284892 iter 80 value 84.808964 iter 90 value 82.784420 iter 100 value 82.180151 final value 82.180151 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.437479 iter 10 value 94.305065 iter 20 value 89.985563 iter 30 value 89.128088 iter 40 value 85.858005 iter 50 value 84.168152 iter 60 value 82.913205 iter 70 value 81.072399 iter 80 value 80.413392 iter 90 value 80.249136 iter 100 value 80.190487 final value 80.190487 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 139.265653 iter 10 value 94.734066 iter 20 value 92.749935 iter 30 value 88.812871 iter 40 value 87.982482 iter 50 value 85.527460 iter 60 value 84.811567 iter 70 value 84.556825 iter 80 value 84.421619 iter 90 value 83.182511 iter 100 value 81.661726 final value 81.661726 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 123.530331 iter 10 value 94.436221 iter 20 value 85.969000 iter 30 value 84.424096 iter 40 value 83.186438 iter 50 value 81.487099 iter 60 value 80.662938 iter 70 value 80.382926 iter 80 value 80.284733 iter 90 value 80.145252 iter 100 value 80.070768 final value 80.070768 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 122.040745 iter 10 value 93.742769 iter 20 value 92.035927 iter 30 value 87.170510 iter 40 value 84.525837 iter 50 value 82.695550 iter 60 value 81.819797 iter 70 value 81.090270 iter 80 value 80.866565 iter 90 value 80.664169 iter 100 value 80.613960 final value 80.613960 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.446293 iter 10 value 93.595550 iter 20 value 86.803714 iter 30 value 85.477122 iter 40 value 83.384252 iter 50 value 82.149435 iter 60 value 81.583185 iter 70 value 81.168819 iter 80 value 80.297440 iter 90 value 80.118038 iter 100 value 80.045198 final value 80.045198 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 141.108606 iter 10 value 96.156120 iter 20 value 93.581164 iter 30 value 86.708746 iter 40 value 83.559380 iter 50 value 83.259004 iter 60 value 82.477093 iter 70 value 82.464398 iter 80 value 82.087805 iter 90 value 81.280733 iter 100 value 80.825314 final value 80.825314 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 117.846825 iter 10 value 94.415169 iter 20 value 93.848843 iter 30 value 85.648503 iter 40 value 85.299087 iter 50 value 84.511338 iter 60 value 83.361235 iter 70 value 82.234003 iter 80 value 80.967501 iter 90 value 80.478900 iter 100 value 80.237792 final value 80.237792 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.108487 final value 94.485747 converged Fitting Repeat 2 # weights: 103 initial value 101.908643 iter 10 value 94.485764 iter 20 value 94.484177 iter 30 value 92.265561 iter 40 value 91.948011 iter 50 value 91.946074 iter 60 value 91.944520 iter 70 value 91.944152 iter 80 value 91.795145 iter 90 value 91.209943 iter 100 value 90.945517 final value 90.945517 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 97.826808 iter 10 value 94.486015 final value 94.484367 converged Fitting Repeat 4 # weights: 103 initial value 101.189813 iter 10 value 94.485602 iter 20 value 94.484245 iter 30 value 94.235375 iter 40 value 94.113841 final value 94.113458 converged Fitting Repeat 5 # weights: 103 initial value 104.856701 iter 10 value 94.486000 final value 94.484339 converged Fitting Repeat 1 # weights: 305 initial value 101.946393 iter 10 value 94.489220 iter 20 value 94.484683 iter 30 value 87.880946 iter 40 value 86.984385 iter 50 value 84.493956 iter 60 value 84.468806 iter 70 value 84.189795 iter 80 value 83.233683 iter 90 value 82.548950 iter 100 value 82.547702 final value 82.547702 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 112.313413 iter 10 value 94.434793 iter 20 value 94.406995 iter 30 value 93.713676 iter 40 value 87.957787 iter 50 value 84.107606 iter 60 value 84.056827 iter 70 value 83.208755 iter 80 value 83.157839 final value 83.157401 converged Fitting Repeat 3 # weights: 305 initial value 100.810273 iter 10 value 94.471973 iter 20 value 94.306954 iter 30 value 94.043526 iter 40 value 94.037941 iter 50 value 94.023403 final value 94.023397 converged Fitting Repeat 4 # weights: 305 initial value 95.142633 iter 10 value 94.454407 iter 20 value 94.449694 iter 30 value 94.108917 iter 40 value 86.137516 iter 50 value 86.111552 iter 60 value 86.111251 iter 70 value 84.639228 iter 80 value 84.622845 final value 84.622822 converged Fitting Repeat 5 # weights: 305 initial value 102.312264 iter 10 value 94.489180 iter 20 value 94.470293 iter 30 value 85.039192 final value 84.884545 converged Fitting Repeat 1 # weights: 507 initial value 93.900599 iter 10 value 93.255265 iter 20 value 93.254524 iter 30 value 93.226213 iter 40 value 93.178147 iter 50 value 93.177392 iter 60 value 93.175256 final value 93.175084 converged Fitting Repeat 2 # weights: 507 initial value 104.543266 iter 10 value 94.476410 iter 20 value 94.468870 final value 94.467635 converged Fitting Repeat 3 # weights: 507 initial value 108.688207 iter 10 value 91.429752 iter 20 value 91.156844 iter 30 value 91.145272 iter 40 value 91.144657 iter 50 value 90.852030 iter 60 value 84.277383 iter 70 value 83.504450 iter 80 value 83.503551 iter 90 value 82.907500 iter 100 value 82.248125 final value 82.248125 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 97.397076 iter 10 value 94.054648 iter 20 value 90.094828 iter 30 value 86.556841 iter 40 value 86.479271 iter 50 value 86.475886 iter 60 value 86.475405 iter 70 value 84.669378 iter 80 value 84.024846 iter 90 value 83.997023 iter 100 value 83.980001 final value 83.980001 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.212568 iter 10 value 94.067293 iter 20 value 94.052930 iter 30 value 94.051709 iter 40 value 86.715213 iter 50 value 86.703178 iter 60 value 86.693724 iter 70 value 84.624622 iter 80 value 83.940847 iter 90 value 83.774828 final value 83.771526 converged Fitting Repeat 1 # weights: 103 initial value 96.594140 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 99.423722 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 95.651824 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 101.365821 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 95.446829 final value 93.912644 converged Fitting Repeat 1 # weights: 305 initial value 98.973568 final value 94.052908 converged Fitting Repeat 2 # weights: 305 initial value 99.150436 iter 10 value 92.724020 final value 92.696797 converged Fitting Repeat 3 # weights: 305 initial value 104.433494 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 112.313065 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 112.458331 iter 10 value 93.226191 iter 10 value 93.226190 iter 10 value 93.226190 final value 93.226190 converged Fitting Repeat 1 # weights: 507 initial value 109.783189 iter 10 value 92.945415 final value 92.945355 converged Fitting Repeat 2 # weights: 507 initial value 100.145649 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 95.924442 iter 10 value 92.945501 final value 92.945355 converged Fitting Repeat 4 # weights: 507 initial value 95.631115 final value 92.945356 converged Fitting Repeat 5 # weights: 507 initial value 95.461049 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 102.922140 iter 10 value 94.055311 iter 20 value 93.590101 iter 30 value 93.242049 iter 40 value 93.236073 iter 50 value 92.681814 iter 60 value 85.235786 iter 70 value 84.910411 iter 80 value 84.374783 iter 90 value 84.098018 iter 100 value 83.908019 final value 83.908019 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.810435 iter 10 value 93.985097 iter 20 value 93.237902 iter 30 value 93.231096 iter 40 value 92.856376 iter 50 value 90.653607 iter 60 value 89.320958 iter 70 value 89.209601 iter 80 value 87.459854 iter 90 value 86.304214 iter 100 value 84.500199 final value 84.500199 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.034067 iter 10 value 94.056735 iter 20 value 88.486472 iter 30 value 86.866371 iter 40 value 86.089564 iter 50 value 85.759139 iter 60 value 85.728721 iter 70 value 85.722588 iter 80 value 85.720188 iter 90 value 85.621363 final value 85.619739 converged Fitting Repeat 4 # weights: 103 initial value 105.906849 iter 10 value 87.517728 iter 20 value 86.020562 iter 30 value 85.832961 iter 40 value 85.797299 iter 50 value 85.629588 iter 60 value 85.619761 final value 85.619742 converged Fitting Repeat 5 # weights: 103 initial value 97.223970 iter 10 value 94.072499 iter 20 value 93.670269 iter 30 value 93.245552 iter 40 value 92.178192 iter 50 value 85.890340 iter 60 value 84.952650 iter 70 value 84.416780 iter 80 value 84.269654 iter 90 value 84.129987 iter 100 value 84.007624 final value 84.007624 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 111.066108 iter 10 value 93.076097 iter 20 value 89.017538 iter 30 value 86.530354 iter 40 value 85.674691 iter 50 value 85.006496 iter 60 value 84.954948 iter 70 value 84.905583 iter 80 value 84.466018 iter 90 value 83.530877 iter 100 value 82.584960 final value 82.584960 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 108.449740 iter 10 value 92.849131 iter 20 value 88.855225 iter 30 value 87.458583 iter 40 value 87.072923 iter 50 value 86.682631 iter 60 value 85.926273 iter 70 value 84.092782 iter 80 value 83.630342 iter 90 value 83.469657 iter 100 value 83.282548 final value 83.282548 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.307706 iter 10 value 94.023195 iter 20 value 86.582251 iter 30 value 84.900819 iter 40 value 84.410177 iter 50 value 84.055014 iter 60 value 83.433147 iter 70 value 83.074347 iter 80 value 82.971102 iter 90 value 82.609859 iter 100 value 82.305272 final value 82.305272 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 112.624018 iter 10 value 93.518715 iter 20 value 89.677224 iter 30 value 83.863509 iter 40 value 83.295250 iter 50 value 82.793890 iter 60 value 82.665675 iter 70 value 82.592496 iter 80 value 82.579745 iter 90 value 82.572568 iter 100 value 82.552148 final value 82.552148 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 107.384233 iter 10 value 94.068156 iter 20 value 88.851059 iter 30 value 86.316769 iter 40 value 85.756608 iter 50 value 85.318148 iter 60 value 85.105847 iter 70 value 84.844337 iter 80 value 84.768377 iter 90 value 84.766216 iter 100 value 84.764536 final value 84.764536 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 105.539754 iter 10 value 93.542772 iter 20 value 92.677785 iter 30 value 90.476765 iter 40 value 90.126283 iter 50 value 89.099598 iter 60 value 88.972790 iter 70 value 88.518493 iter 80 value 86.319617 iter 90 value 84.805242 iter 100 value 84.545405 final value 84.545405 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.402545 iter 10 value 96.020160 iter 20 value 91.807984 iter 30 value 89.979111 iter 40 value 85.333400 iter 50 value 84.677068 iter 60 value 84.329968 iter 70 value 84.202423 iter 80 value 83.789775 iter 90 value 83.068426 iter 100 value 82.615727 final value 82.615727 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.160501 iter 10 value 93.940901 iter 20 value 89.088261 iter 30 value 87.815627 iter 40 value 86.536777 iter 50 value 85.669700 iter 60 value 84.011820 iter 70 value 83.709969 iter 80 value 82.917777 iter 90 value 82.698560 iter 100 value 82.632465 final value 82.632465 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.738857 iter 10 value 93.657877 iter 20 value 92.386009 iter 30 value 87.751285 iter 40 value 86.054992 iter 50 value 85.395390 iter 60 value 84.649158 iter 70 value 83.387350 iter 80 value 82.755008 iter 90 value 82.435745 iter 100 value 82.284665 final value 82.284665 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.227869 iter 10 value 93.935947 iter 20 value 89.278491 iter 30 value 86.911262 iter 40 value 86.288134 iter 50 value 84.642012 iter 60 value 84.055534 iter 70 value 83.935070 iter 80 value 83.690584 iter 90 value 83.115439 iter 100 value 82.635693 final value 82.635693 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.457346 final value 94.054551 converged Fitting Repeat 2 # weights: 103 initial value 96.135449 iter 10 value 92.947465 iter 20 value 92.946435 final value 92.945830 converged Fitting Repeat 3 # weights: 103 initial value 103.312733 iter 10 value 92.925596 iter 20 value 92.761609 iter 30 value 92.760435 final value 92.760033 converged Fitting Repeat 4 # weights: 103 initial value 101.752543 final value 94.054487 converged Fitting Repeat 5 # weights: 103 initial value 105.334134 final value 94.054700 converged Fitting Repeat 1 # weights: 305 initial value 128.303986 iter 10 value 94.061708 iter 20 value 94.055566 iter 30 value 92.700708 iter 40 value 89.013639 iter 50 value 88.157000 iter 60 value 88.154339 iter 70 value 86.046331 iter 80 value 86.021846 iter 90 value 86.016187 iter 100 value 86.015274 final value 86.015274 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.288419 iter 10 value 94.058050 iter 20 value 94.052927 final value 94.052924 converged Fitting Repeat 3 # weights: 305 initial value 96.746335 iter 10 value 94.057877 iter 20 value 94.011329 iter 30 value 89.090420 iter 40 value 89.084328 iter 50 value 88.518839 iter 60 value 88.421647 iter 70 value 85.871963 iter 80 value 85.484864 iter 90 value 85.482849 final value 85.481814 converged Fitting Repeat 4 # weights: 305 initial value 94.533944 iter 10 value 92.950621 iter 20 value 92.947476 iter 30 value 92.760296 final value 92.760132 converged Fitting Repeat 5 # weights: 305 initial value 102.098393 iter 10 value 92.951654 iter 20 value 92.950721 iter 30 value 92.946388 iter 40 value 92.762589 final value 92.760578 converged Fitting Repeat 1 # weights: 507 initial value 122.931311 iter 10 value 92.968945 iter 20 value 92.963917 iter 30 value 92.679916 iter 40 value 90.998734 iter 50 value 86.538393 iter 60 value 86.497240 iter 70 value 86.492655 iter 80 value 86.489703 iter 90 value 86.488241 iter 100 value 86.485231 final value 86.485231 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 101.553256 iter 10 value 92.954570 iter 20 value 92.950275 iter 30 value 91.989750 iter 40 value 85.783655 iter 50 value 84.926916 iter 60 value 84.923999 iter 70 value 84.923043 iter 80 value 84.154534 iter 90 value 83.968694 iter 100 value 83.528301 final value 83.528301 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.192225 iter 10 value 94.061547 iter 20 value 94.035819 iter 30 value 93.502344 iter 40 value 89.902351 iter 50 value 89.836947 iter 60 value 89.833956 iter 70 value 89.831016 iter 80 value 89.821943 iter 90 value 89.821268 iter 100 value 89.690854 final value 89.690854 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 95.098900 iter 10 value 94.062405 iter 20 value 92.950032 iter 30 value 92.949310 iter 40 value 92.945843 iter 50 value 91.272037 iter 60 value 88.249152 iter 70 value 87.212916 iter 80 value 86.679129 iter 90 value 85.710961 iter 100 value 82.923815 final value 82.923815 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.830148 iter 10 value 93.099433 iter 20 value 92.953734 iter 30 value 92.938381 iter 40 value 92.246203 iter 50 value 90.222149 iter 60 value 90.192584 iter 70 value 90.192261 iter 80 value 88.690126 iter 90 value 88.504064 iter 100 value 88.470456 final value 88.470456 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 123.685006 iter 10 value 117.892282 iter 20 value 117.702004 iter 30 value 117.534237 iter 40 value 107.723857 iter 50 value 107.186241 iter 60 value 107.183718 final value 107.183493 converged Fitting Repeat 2 # weights: 507 initial value 134.203461 iter 10 value 117.767214 iter 20 value 117.745091 iter 30 value 107.443720 iter 40 value 106.806547 iter 50 value 106.794717 iter 60 value 106.764299 final value 106.764215 converged Fitting Repeat 3 # weights: 507 initial value 150.578481 iter 10 value 117.874219 iter 20 value 117.615569 iter 30 value 109.122525 iter 40 value 106.481194 iter 50 value 102.445448 iter 60 value 102.412027 iter 70 value 102.148967 iter 80 value 102.090807 iter 90 value 102.046774 iter 100 value 100.878130 final value 100.878130 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 135.839554 iter 10 value 117.551781 iter 20 value 117.507890 iter 30 value 117.501912 iter 40 value 116.489708 iter 50 value 106.492062 iter 60 value 103.047426 iter 70 value 102.986368 iter 80 value 102.982244 iter 90 value 102.981801 iter 100 value 102.981693 final value 102.981693 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 126.608030 iter 10 value 117.619267 iter 20 value 117.614482 iter 30 value 117.609540 iter 40 value 117.552836 final value 117.551453 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Tue Feb 28 05:56:02 2023 *********************************************** Number of test functions: 8 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 8 test functions, 0 errors, 0 failures Number of test functions: 8 Number of errors: 0 Number of failures: 0 Warning messages: 1: The `.data` argument of `add_column()` must have unique names as of tibble 3.0.0. ℹ Use `.name_repair = "minimal"`. ℹ The deprecated feature was likely used in the tibble package. Please report the issue at <https://github.com/tidyverse/tibble/issues>. 2: `repeats` has no meaning for this resampling method. 3: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 53.827 1.459 66.745
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 37.751 | 0.581 | 38.332 | |
FreqInteractors | 0.284 | 0.007 | 0.295 | |
calculateAAC | 0.076 | 0.004 | 0.080 | |
calculateAutocor | 0.742 | 0.025 | 0.766 | |
calculateBE | 0.237 | 0.007 | 0.245 | |
calculateCTDC | 0.144 | 0.001 | 0.144 | |
calculateCTDD | 0.899 | 0.028 | 0.927 | |
calculateCTDT | 0.303 | 0.000 | 0.303 | |
calculateCTriad | 0.472 | 0.004 | 0.476 | |
calculateDC | 0.129 | 0.007 | 0.137 | |
calculateF | 0.698 | 0.005 | 0.702 | |
calculateKSAAP | 0.156 | 0.004 | 0.160 | |
calculateQD_Sm | 2.394 | 0.067 | 2.462 | |
calculateTC | 2.417 | 0.072 | 2.489 | |
calculateTC_Sm | 0.341 | 0.000 | 0.341 | |
corr_plot | 37.970 | 0.459 | 38.432 | |
enrichfindP | 0.421 | 0.033 | 16.104 | |
enrichfind_hp | 0.042 | 0.003 | 1.295 | |
enrichplot | 0.339 | 0.015 | 0.356 | |
filter_missing_values | 0.002 | 0.000 | 0.002 | |
getFASTA | 0.848 | 0.004 | 8.634 | |
getHPI | 0.001 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.000 | 0.001 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.000 | 0.001 | 0.002 | |
plotPPI | 0.072 | 0.006 | 0.078 | |
pred_ensembel | 18.026 | 0.304 | 15.995 | |
var_imp | 39.834 | 0.912 | 40.748 | |