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This page was generated on 2023-03-01 07:38:47 -0000 (Wed, 01 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4266
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BUILD results for QuasR on kunpeng1


To the developers/maintainers of the QuasR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/QuasR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1567/2171HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.39.2  (landing page)
Michael Stadler
Snapshot Date: 2023-02-27 07:53:22 -0000 (Mon, 27 Feb 2023)
git_url: https://git.bioconductor.org/packages/QuasR
git_branch: master
git_last_commit: cd52416
git_last_commit_date: 2023-01-27 16:17:31 -0000 (Fri, 27 Jan 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: QuasR
Version: 1.39.2
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data QuasR
StartedAt: 2023-02-27 16:55:19 -0000 (Mon, 27 Feb 2023)
EndedAt: 2023-02-27 16:58:22 -0000 (Mon, 27 Feb 2023)
EllapsedTime: 183.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data QuasR
###
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* checking for file ‘QuasR/DESCRIPTION’ ... OK
* preparing ‘QuasR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘QuasR.Rmd’ using rmarkdown
Quitting from lines 902-910 (QuasR.Rmd) 
Error: processing vignette 'QuasR.Rmd' failed with diagnostics:
The Rhisat2 package is required for alignments, but not installed.
Install it using BiocManager::install("Rhisat2")
--- failed re-building ‘QuasR.Rmd’

SUMMARY: processing the following file failed:
  ‘QuasR.Rmd’

Error: Vignette re-building failed.
Execution halted