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This page was generated on 2023-03-01 07:38:49 -0000 (Wed, 01 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4266
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BUILD results for Risa on kunpeng1


To the developers/maintainers of the Risa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Risa.git to
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raw results

Package 1678/2171HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Risa 1.41.0  (landing page)
Alejandra Gonzalez-Beltran
Snapshot Date: 2023-02-27 07:53:22 -0000 (Mon, 27 Feb 2023)
git_url: https://git.bioconductor.org/packages/Risa
git_branch: master
git_last_commit: a579f19
git_last_commit_date: 2022-11-01 15:07:22 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: Risa
Version: 1.41.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Risa
StartedAt: 2023-02-27 17:23:07 -0000 (Mon, 27 Feb 2023)
EndedAt: 2023-02-27 17:24:10 -0000 (Mon, 27 Feb 2023)
EllapsedTime: 63.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Risa
###
##############################################################################
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* checking for file ‘Risa/DESCRIPTION’ ... OK
* preparing ‘Risa’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Risa.Rnw’ using Sweave
Loading required package: Biobase
Loading required package: BiocGenerics

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: Rcpp
Loading required package: biocViews
Loading required package: affy
Loading required package: faahKO
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘faahKO’

Error: processing vignette 'Risa.Rnw' failed with diagnostics:
 chunk 2 (label = Risa-readISAtab) 
Error in find.package("faahKO") : there is no package called ‘faahKO’

--- failed re-building ‘Risa.Rnw’

SUMMARY: processing the following file failed:
  ‘Risa.Rnw’

Error: Vignette re-building failed.
Execution halted