| Back to Build/check report for BioC 3.17: simplified long | 
  | 
This page was generated on 2023-03-01 07:38:36 -0000 (Wed, 01 Mar 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs | 
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4266 | 
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| 
To the developers/maintainers of the biomvRCNS package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomvRCNS.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page.  | 
| Package 193/2171 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| biomvRCNS 1.39.0  (landing page) Yang Du 
  | kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | ERROR | ERROR | skipped | |||||||||
| Package: biomvRCNS | 
| Version: 1.39.0 | 
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL biomvRCNS | 
| StartedAt: 2023-02-27 10:12:09 -0000 (Mon, 27 Feb 2023) | 
| EndedAt: 2023-02-27 10:12:10 -0000 (Mon, 27 Feb 2023) | 
| EllapsedTime: 1.0 seconds | 
| RetCode: 1 | 
| Status: ERROR | 
##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL biomvRCNS
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’
* installing *source* package ‘biomvRCNS’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -c biomvRCNS.c -o biomvRCNS.o
biomvRCNS.c: In function ‘forward’:
biomvRCNS.c:153:43: error: ‘DOUBLE_XMIN’ undeclared (first use in this function); did you mean ‘DBL_MIN’?
  153 |                         m_e(F, t, j, T)+= DOUBLE_XMIN;
      |                                           ^~~~~~~~~~~
      |                                           DBL_MIN
biomvRCNS.c:153:43: note: each undeclared identifier is reported only once for each function it appears in
biomvRCNS.c: In function ‘viterbi’:
biomvRCNS.c:294:36: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’?
  294 |         double obs, prod, maxprod=-DOUBLE_XMAX;
      |                                    ^~~~~~~~~~~
      |                                    DBL_MAX
biomvRCNS.c: In function ‘logviterbi’:
biomvRCNS.c:401:36: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’?
  401 |         double obs, prod, maxprod=-DOUBLE_XMAX;
      |                                    ^~~~~~~~~~~
      |                                    DBL_MAX
make: *** [/home/biocbuild/bbs-3.17-bioc/R/etc/Makeconf:191: biomvRCNS.o] Error 1
ERROR: compilation failed for package ‘biomvRCNS’
* removing ‘/home/biocbuild/bbs-3.17-bioc/R/library/biomvRCNS’