| Back to Build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-03-01 07:38:49 -0000 (Wed, 01 Mar 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" | 4266 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the rfaRm package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rfaRm.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1648/2171 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rfaRm 1.11.2 (landing page) Lara Selles Vidal
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | ERROR | OK | ERROR | |||||||||
| Package: rfaRm |
| Version: 1.11.2 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:rfaRm.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings rfaRm_1.11.2.tar.gz |
| StartedAt: 2023-02-28 12:56:34 -0000 (Tue, 28 Feb 2023) |
| EndedAt: 2023-02-28 12:56:40 -0000 (Tue, 28 Feb 2023) |
| EllapsedTime: 6.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: rfaRm.Rcheck |
| Warnings: NA |
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### Running command:
###
### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:rfaRm.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/library --timings rfaRm_1.11.2.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/rfaRm.Rcheck’
* using R Under development (unstable) (2023-01-14 r83615)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.1 LTS
* using session charset: UTF-8
* checking for file ‘rfaRm/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘rfaRm’ version ‘1.11.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘rfaRm’ can be installed ... ERROR
Installation failed.
See ‘/home/biocbuild/bbs-3.17-bioc/meat/rfaRm.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
See
‘/home/biocbuild/bbs-3.17-bioc/meat/rfaRm.Rcheck/00check.log’
for details.
rfaRm.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL rfaRm ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/library’ * installing *source* package ‘rfaRm’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location Error: package or namespace load failed for ‘rfaRm’: .onLoad failed in loadNamespace() for 'rfaRm', details: call: open.connection(x, "rb") error: Timeout was reached: [rfam.org] SSL connection timeout Error: loading failed Execution halted ERROR: loading failed * removing ‘/home/biocbuild/bbs-3.17-bioc/R/library/rfaRm’ * restoring previous ‘/home/biocbuild/bbs-3.17-bioc/R/library/rfaRm’