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This page was generated on 2023-03-01 07:38:53 -0000 (Wed, 01 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-01-14 r83615) -- "Unsuffered Consequences" 4266
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BUILD results for xcms on kunpeng1


To the developers/maintainers of the xcms package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/xcms.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2156/2171HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
xcms 3.21.2  (landing page)
Steffen Neumann
Snapshot Date: 2023-02-27 07:53:22 -0000 (Mon, 27 Feb 2023)
git_url: https://git.bioconductor.org/packages/xcms
git_branch: master
git_last_commit: 19ed3b9
git_last_commit_date: 2023-02-12 13:32:58 -0000 (Sun, 12 Feb 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: xcms
Version: 3.21.2
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data xcms
StartedAt: 2023-02-27 19:41:46 -0000 (Mon, 27 Feb 2023)
EndedAt: 2023-02-27 19:44:49 -0000 (Mon, 27 Feb 2023)
EllapsedTime: 183.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data xcms
###
##############################################################################
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* checking for file ‘xcms/DESCRIPTION’ ... OK
* preparing ‘xcms’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘LC-MS-feature-grouping.Rmd’ using rmarkdown
Quitting from lines 69-77 (LC-MS-feature-grouping.Rmd) 
Error: processing vignette 'LC-MS-feature-grouping.Rmd' failed with diagnostics:
there is no package called 'faahKO'
--- failed re-building ‘LC-MS-feature-grouping.Rmd’

--- re-building ‘xcms-direct-injection.Rmd’ using rmarkdown
--- finished re-building ‘xcms-direct-injection.Rmd’

--- re-building ‘xcms-lcms-ms.Rmd’ using rmarkdown
--- finished re-building ‘xcms-lcms-ms.Rmd’

--- re-building ‘xcms.Rmd’ using rmarkdown
Quitting from lines 30-43 (xcms.Rmd) 
Error: processing vignette 'xcms.Rmd' failed with diagnostics:
there is no package called 'faahKO'
--- failed re-building ‘xcms.Rmd’

SUMMARY: processing the following files failed:
  ‘LC-MS-feature-grouping.Rmd’ ‘xcms.Rmd’

Error: Vignette re-building failed.
Execution halted