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This page was generated on 2023-03-27 05:50:30 -0000 (Mon, 27 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6083
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BUILD results for BioMM on kunpeng1


To the developers/maintainers of the BioMM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BioMM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 205/2195HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioMM 1.15.0  (landing page)
Junfang Chen
Snapshot Date: 2023-03-24 01:40:07 -0000 (Fri, 24 Mar 2023)
git_url: https://git.bioconductor.org/packages/BioMM
git_branch: devel
git_last_commit: df2cd53
git_last_commit_date: 2022-11-01 15:19:15 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: BioMM
Version: 1.15.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BioMM
StartedAt: 2023-03-24 06:35:02 -0000 (Fri, 24 Mar 2023)
EndedAt: 2023-03-24 06:36:25 -0000 (Fri, 24 Mar 2023)
EllapsedTime: 83.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BioMM
###
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* checking for file ‘BioMM/DESCRIPTION’ ... OK
* preparing ‘BioMM’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘BioMMtutorial.Rmd’ using rmarkdown
Quitting from lines 307-314 (BioMMtutorial.Rmd) 
Error: processing vignette 'BioMMtutorial.Rmd' failed with diagnostics:
BiocParallel errors
  4 remote errors, element index: 1, 13, 25, 37
  42 unevaluated and other errors
  first remote error:
Error in (function (..., row.names = NULL, check.rows = FALSE, check.names = TRUE, : 'row.names' should specify one of the variables

--- failed re-building ‘BioMMtutorial.Rmd’

SUMMARY: processing the following file failed:
  ‘BioMMtutorial.Rmd’

Error: Vignette re-building failed.
Execution halted