Back to Build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-03-27 05:50:36 -0000 (Mon, 27 Mar 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng1 | Linux (Ubuntu 22.04.1 LTS) | aarch64 | R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" | 6083 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 935/2195 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.5.3 (landing page) Matineh Rahmatbakhsh
| kunpeng1 | Linux (Ubuntu 22.04.1 LTS) / aarch64 | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.5.3 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings HPiP_1.5.3.tar.gz |
StartedAt: 2023-03-25 04:39:02 -0000 (Sat, 25 Mar 2023) |
EndedAt: 2023-03-25 04:54:32 -0000 (Sat, 25 Mar 2023) |
EllapsedTime: 930.3 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings HPiP_1.5.3.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck’ * using R Under development (unstable) (2023-03-12 r83975) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0 * running under: Ubuntu 22.04.2 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.5.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 38.989 0.512 39.505 corr_plot 36.911 0.312 37.225 FSmethod 36.662 0.444 37.115 pred_ensembel 17.450 0.400 15.555 getFASTA 0.700 0.020 6.803 enrichfindP 0.417 0.044 15.211 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.17-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 109.573164 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 104.067202 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 95.597877 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 96.255857 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 95.511383 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 96.196353 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 99.287522 iter 10 value 88.785627 iter 20 value 81.023222 iter 30 value 80.897609 iter 40 value 80.706461 iter 50 value 80.675119 iter 60 value 80.674593 final value 80.674590 converged Fitting Repeat 3 # weights: 305 initial value 100.800121 final value 94.008696 converged Fitting Repeat 4 # weights: 305 initial value 113.139639 final value 94.008697 converged Fitting Repeat 5 # weights: 305 initial value 109.551337 iter 10 value 91.154342 iter 20 value 88.146803 iter 30 value 88.138961 final value 88.138950 converged Fitting Repeat 1 # weights: 507 initial value 96.291151 iter 10 value 93.893275 iter 20 value 93.879918 final value 93.879912 converged Fitting Repeat 2 # weights: 507 initial value 95.771318 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 102.592401 iter 10 value 91.923825 iter 20 value 90.915928 iter 30 value 90.866769 final value 90.817139 converged Fitting Repeat 4 # weights: 507 initial value 108.157061 final value 94.008696 converged Fitting Repeat 5 # weights: 507 initial value 119.178164 final value 93.371808 converged Fitting Repeat 1 # weights: 103 initial value 106.771660 iter 10 value 94.054843 iter 20 value 91.043061 iter 30 value 85.676274 iter 40 value 85.307552 iter 50 value 84.130098 iter 60 value 84.052564 iter 70 value 83.328022 final value 83.311106 converged Fitting Repeat 2 # weights: 103 initial value 98.945595 iter 10 value 93.984587 iter 20 value 86.528521 iter 30 value 84.077285 iter 40 value 83.222507 iter 50 value 82.802340 iter 60 value 82.642187 iter 70 value 81.790196 iter 80 value 81.062656 iter 90 value 81.016365 iter 100 value 80.772461 final value 80.772461 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.605279 iter 10 value 94.055550 iter 20 value 91.764078 iter 30 value 91.140379 iter 40 value 90.599846 iter 50 value 89.909511 iter 60 value 89.756662 iter 70 value 89.578121 final value 89.573554 converged Fitting Repeat 4 # weights: 103 initial value 101.751157 iter 10 value 94.386851 iter 20 value 94.059096 iter 30 value 93.270548 iter 40 value 92.495664 iter 50 value 91.491462 iter 60 value 91.278673 iter 70 value 89.802786 iter 80 value 89.784805 final value 89.784803 converged Fitting Repeat 5 # weights: 103 initial value 99.895187 iter 10 value 94.056732 iter 20 value 87.777219 iter 30 value 85.747236 iter 40 value 85.302499 iter 50 value 82.875482 iter 60 value 82.516499 iter 70 value 81.241499 iter 80 value 80.653394 iter 90 value 80.572913 final value 80.571485 converged Fitting Repeat 1 # weights: 305 initial value 106.303652 iter 10 value 93.899043 iter 20 value 87.080516 iter 30 value 86.486556 iter 40 value 85.446193 iter 50 value 85.071073 iter 60 value 84.211544 iter 70 value 83.113921 iter 80 value 81.429396 iter 90 value 81.240249 iter 100 value 81.144800 final value 81.144800 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.303567 iter 10 value 92.133382 iter 20 value 84.423854 iter 30 value 83.698591 iter 40 value 83.232417 iter 50 value 83.058803 iter 60 value 83.017916 iter 70 value 83.001287 iter 80 value 82.958731 iter 90 value 82.725365 iter 100 value 81.612045 final value 81.612045 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.414371 iter 10 value 94.093592 iter 20 value 90.957283 iter 30 value 86.623919 iter 40 value 83.683967 iter 50 value 82.073610 iter 60 value 81.469145 iter 70 value 80.602942 iter 80 value 80.288132 iter 90 value 80.224399 iter 100 value 79.923277 final value 79.923277 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 102.636975 iter 10 value 94.016971 iter 20 value 88.140272 iter 30 value 87.393594 iter 40 value 86.721370 iter 50 value 82.810965 iter 60 value 80.924142 iter 70 value 80.349639 iter 80 value 79.975111 iter 90 value 79.412309 iter 100 value 79.231715 final value 79.231715 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 129.788294 iter 10 value 95.189915 iter 20 value 85.298752 iter 30 value 85.032396 iter 40 value 82.504929 iter 50 value 80.892914 iter 60 value 80.152731 iter 70 value 79.956568 iter 80 value 79.920254 iter 90 value 79.891367 iter 100 value 79.822481 final value 79.822481 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.185043 iter 10 value 94.058535 iter 20 value 87.627923 iter 30 value 85.498520 iter 40 value 84.857843 iter 50 value 82.522553 iter 60 value 80.590956 iter 70 value 80.060719 iter 80 value 79.763793 iter 90 value 79.295010 iter 100 value 79.041575 final value 79.041575 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.720817 iter 10 value 92.845580 iter 20 value 84.505539 iter 30 value 84.239007 iter 40 value 83.091727 iter 50 value 81.543456 iter 60 value 81.072984 iter 70 value 81.006795 iter 80 value 80.570291 iter 90 value 80.068031 iter 100 value 79.567416 final value 79.567416 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.538092 iter 10 value 93.504158 iter 20 value 86.158730 iter 30 value 83.886886 iter 40 value 82.992089 iter 50 value 82.804335 iter 60 value 82.547852 iter 70 value 81.816040 iter 80 value 80.482985 iter 90 value 79.745300 iter 100 value 79.414090 final value 79.414090 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.939831 iter 10 value 94.084255 iter 20 value 91.768503 iter 30 value 87.374149 iter 40 value 83.497121 iter 50 value 81.778432 iter 60 value 80.635744 iter 70 value 80.192574 iter 80 value 79.495091 iter 90 value 79.100900 iter 100 value 78.944421 final value 78.944421 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.527938 iter 10 value 94.829365 iter 20 value 91.443829 iter 30 value 86.358179 iter 40 value 82.633461 iter 50 value 81.373884 iter 60 value 80.749224 iter 70 value 80.258737 iter 80 value 80.097016 iter 90 value 79.777170 iter 100 value 79.431544 final value 79.431544 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.444283 final value 93.373581 converged Fitting Repeat 2 # weights: 103 initial value 95.293837 iter 10 value 93.917389 iter 20 value 93.916655 iter 30 value 93.913309 final value 93.904169 converged Fitting Repeat 3 # weights: 103 initial value 95.018988 iter 10 value 94.010969 iter 20 value 94.010054 iter 30 value 94.008842 iter 40 value 92.267265 iter 50 value 84.816251 iter 60 value 84.786065 iter 70 value 83.816958 iter 80 value 83.436952 iter 90 value 83.434876 iter 100 value 83.434324 final value 83.434324 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 94.571613 final value 94.054619 converged Fitting Repeat 5 # weights: 103 initial value 100.749801 iter 10 value 94.010137 iter 20 value 93.182481 iter 30 value 83.980998 iter 40 value 83.979556 iter 40 value 83.979556 iter 40 value 83.979556 final value 83.979556 converged Fitting Repeat 1 # weights: 305 initial value 104.377381 iter 10 value 92.065169 iter 20 value 89.846084 iter 30 value 89.838419 iter 40 value 89.837332 iter 50 value 89.326491 iter 60 value 89.325390 iter 70 value 89.236497 iter 80 value 88.915652 iter 90 value 88.771879 final value 88.771860 converged Fitting Repeat 2 # weights: 305 initial value 98.461025 iter 10 value 93.903724 iter 20 value 92.347605 iter 30 value 83.665782 iter 40 value 82.786307 iter 50 value 82.700605 iter 60 value 82.700356 iter 60 value 82.700355 iter 60 value 82.700355 final value 82.700355 converged Fitting Repeat 3 # weights: 305 initial value 104.548311 iter 10 value 94.056737 iter 20 value 94.031884 iter 30 value 92.377884 iter 40 value 92.102556 iter 50 value 89.021400 iter 60 value 82.795656 iter 70 value 82.272071 iter 80 value 82.228447 iter 90 value 82.208290 final value 82.208229 converged Fitting Repeat 4 # weights: 305 initial value 104.073860 iter 10 value 94.057841 iter 20 value 93.998655 iter 30 value 89.930924 iter 40 value 89.925003 iter 50 value 89.168143 iter 60 value 89.006416 iter 70 value 88.895803 iter 80 value 88.894411 iter 90 value 87.413834 iter 100 value 86.991447 final value 86.991447 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.142088 iter 10 value 94.056295 iter 20 value 93.960212 iter 30 value 90.445062 iter 40 value 90.443008 iter 50 value 90.179640 iter 60 value 82.593937 iter 70 value 82.184739 iter 80 value 82.050153 iter 90 value 81.709887 iter 100 value 80.644525 final value 80.644525 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 97.108124 iter 10 value 93.747337 iter 20 value 93.740474 iter 30 value 93.374578 iter 40 value 93.178262 iter 50 value 85.111196 iter 60 value 84.701276 iter 70 value 84.695958 final value 84.695926 converged Fitting Repeat 2 # weights: 507 initial value 99.685049 iter 10 value 94.065213 iter 20 value 94.032293 iter 30 value 83.617902 iter 40 value 83.579943 iter 50 value 83.406231 iter 60 value 80.161538 iter 70 value 80.129073 final value 80.128628 converged Fitting Repeat 3 # weights: 507 initial value 97.238386 iter 10 value 94.019590 iter 20 value 94.006599 iter 30 value 87.413777 iter 40 value 83.746623 iter 50 value 83.135482 iter 60 value 82.741888 iter 70 value 82.730491 iter 80 value 82.590414 iter 90 value 82.587798 iter 100 value 82.502069 final value 82.502069 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.986570 iter 10 value 93.954224 iter 20 value 93.953479 iter 30 value 93.952587 iter 40 value 93.902176 iter 50 value 93.899346 final value 93.899343 converged Fitting Repeat 5 # weights: 507 initial value 101.752949 iter 10 value 94.060944 iter 20 value 90.949666 iter 30 value 83.542143 iter 40 value 83.243862 iter 50 value 82.678953 iter 60 value 82.084795 iter 70 value 81.523979 iter 80 value 79.716600 iter 90 value 78.728049 iter 100 value 78.487891 final value 78.487891 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.743298 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 103.223977 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.212662 final value 94.443243 converged Fitting Repeat 4 # weights: 103 initial value 107.318648 final value 94.275363 converged Fitting Repeat 5 # weights: 103 initial value 95.075290 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 96.866796 iter 10 value 94.275363 final value 94.275362 converged Fitting Repeat 2 # weights: 305 initial value 94.917579 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 108.228276 iter 10 value 92.342820 iter 20 value 91.741545 iter 30 value 91.739775 final value 91.739683 converged Fitting Repeat 4 # weights: 305 initial value 120.847937 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 97.839691 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 113.615373 iter 10 value 94.211080 iter 20 value 94.018076 iter 30 value 93.531234 final value 93.530034 converged Fitting Repeat 2 # weights: 507 initial value 100.639911 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 117.633882 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 98.766178 iter 10 value 94.175556 iter 20 value 94.092000 iter 30 value 94.060707 iter 40 value 92.534535 iter 50 value 92.534158 iter 60 value 92.443744 iter 70 value 92.439375 final value 92.439365 converged Fitting Repeat 5 # weights: 507 initial value 112.970825 final value 94.275362 converged Fitting Repeat 1 # weights: 103 initial value 101.277337 iter 10 value 94.483396 iter 20 value 93.315827 iter 30 value 86.102823 iter 40 value 84.258252 iter 50 value 83.735669 iter 60 value 83.230487 iter 70 value 82.771420 iter 80 value 82.667058 final value 82.667052 converged Fitting Repeat 2 # weights: 103 initial value 108.642744 iter 10 value 94.362190 iter 20 value 93.395768 iter 30 value 87.442577 iter 40 value 86.820565 iter 50 value 83.326738 iter 60 value 82.621885 iter 70 value 82.584191 final value 82.584180 converged Fitting Repeat 3 # weights: 103 initial value 102.007869 iter 10 value 94.486453 iter 20 value 94.297049 iter 30 value 94.280190 iter 40 value 92.155294 iter 50 value 88.907822 iter 60 value 87.372029 iter 70 value 85.916077 iter 80 value 85.721843 iter 90 value 85.510301 iter 100 value 85.498879 final value 85.498879 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.685862 iter 10 value 94.486354 iter 20 value 89.846636 iter 30 value 86.655791 iter 40 value 86.422919 iter 50 value 86.354138 final value 86.354126 converged Fitting Repeat 5 # weights: 103 initial value 115.055728 iter 10 value 94.204282 iter 20 value 87.542887 iter 30 value 86.714990 iter 40 value 86.117020 iter 50 value 85.606490 iter 60 value 85.596656 iter 70 value 85.515152 iter 80 value 85.499017 final value 85.498873 converged Fitting Repeat 1 # weights: 305 initial value 100.168822 iter 10 value 93.847833 iter 20 value 93.159310 iter 30 value 90.518225 iter 40 value 88.257001 iter 50 value 85.730594 iter 60 value 84.436779 iter 70 value 83.146437 iter 80 value 82.581472 iter 90 value 81.780769 iter 100 value 81.662977 final value 81.662977 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.369625 iter 10 value 94.417248 iter 20 value 90.194263 iter 30 value 89.494090 iter 40 value 88.969948 iter 50 value 88.174258 iter 60 value 86.731959 iter 70 value 82.727170 iter 80 value 82.153033 iter 90 value 81.709810 iter 100 value 81.339439 final value 81.339439 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.268260 iter 10 value 93.851348 iter 20 value 90.054243 iter 30 value 85.094435 iter 40 value 84.187155 iter 50 value 83.959099 iter 60 value 83.488396 iter 70 value 83.129812 iter 80 value 81.988851 iter 90 value 81.692036 iter 100 value 81.677101 final value 81.677101 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.628878 iter 10 value 96.297150 iter 20 value 89.275875 iter 30 value 86.933163 iter 40 value 85.002809 iter 50 value 84.372740 iter 60 value 83.491586 iter 70 value 82.862698 iter 80 value 81.642613 iter 90 value 81.230156 iter 100 value 81.180643 final value 81.180643 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 116.185453 iter 10 value 94.490157 iter 20 value 94.288214 iter 30 value 88.985815 iter 40 value 87.739699 iter 50 value 85.082491 iter 60 value 84.550855 iter 70 value 83.998812 iter 80 value 83.367287 iter 90 value 82.661025 iter 100 value 81.363966 final value 81.363966 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 119.820330 iter 10 value 94.542391 iter 20 value 94.493520 iter 30 value 93.013781 iter 40 value 86.424213 iter 50 value 84.038817 iter 60 value 83.253103 iter 70 value 82.071077 iter 80 value 81.728784 iter 90 value 81.475519 iter 100 value 81.267726 final value 81.267726 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 103.131931 iter 10 value 99.431360 iter 20 value 93.562931 iter 30 value 93.089188 iter 40 value 91.967398 iter 50 value 90.217659 iter 60 value 86.216390 iter 70 value 85.372292 iter 80 value 84.175045 iter 90 value 83.722116 iter 100 value 82.536301 final value 82.536301 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 121.862317 iter 10 value 94.647769 iter 20 value 91.834230 iter 30 value 89.248136 iter 40 value 87.405355 iter 50 value 86.463051 iter 60 value 85.719154 iter 70 value 83.474966 iter 80 value 82.793622 iter 90 value 82.522709 iter 100 value 82.236860 final value 82.236860 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.118874 iter 10 value 94.588900 iter 20 value 88.273415 iter 30 value 85.334538 iter 40 value 83.686411 iter 50 value 82.842829 iter 60 value 81.701630 iter 70 value 81.449810 iter 80 value 81.315035 iter 90 value 81.265215 iter 100 value 81.242359 final value 81.242359 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 124.355157 iter 10 value 94.485955 iter 20 value 93.899662 iter 30 value 89.961392 iter 40 value 87.728051 iter 50 value 84.829304 iter 60 value 82.174062 iter 70 value 80.976345 iter 80 value 80.644239 iter 90 value 80.600442 iter 100 value 80.564122 final value 80.564122 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 108.773583 final value 94.485953 converged Fitting Repeat 2 # weights: 103 initial value 99.759336 iter 10 value 94.486045 iter 20 value 94.480178 iter 30 value 93.376271 iter 40 value 88.645469 iter 50 value 83.439443 iter 60 value 83.064374 iter 70 value 83.063516 final value 83.063461 converged Fitting Repeat 3 # weights: 103 initial value 103.238192 iter 10 value 94.485838 iter 20 value 94.484206 iter 30 value 94.253979 iter 40 value 94.241020 final value 94.229026 converged Fitting Repeat 4 # weights: 103 initial value 96.337086 final value 94.485835 converged Fitting Repeat 5 # weights: 103 initial value 106.820712 final value 94.485911 converged Fitting Repeat 1 # weights: 305 initial value 120.177178 iter 10 value 94.488313 iter 20 value 94.315316 iter 30 value 88.136656 iter 40 value 87.205543 iter 50 value 86.248188 final value 86.248186 converged Fitting Repeat 2 # weights: 305 initial value 112.560303 iter 10 value 94.489188 iter 20 value 94.484219 iter 30 value 93.990331 iter 40 value 86.838720 iter 50 value 84.868774 iter 60 value 81.732401 iter 70 value 80.566643 iter 80 value 79.972353 iter 90 value 79.686409 iter 100 value 79.377655 final value 79.377655 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.674049 iter 10 value 94.490152 iter 20 value 88.068170 iter 30 value 87.954990 final value 87.954983 converged Fitting Repeat 4 # weights: 305 initial value 106.111274 iter 10 value 94.489340 iter 20 value 92.785278 iter 30 value 86.169674 iter 40 value 86.039532 iter 50 value 85.968794 final value 85.968184 converged Fitting Repeat 5 # weights: 305 initial value 104.984425 iter 10 value 94.297150 iter 20 value 92.045322 iter 30 value 91.882478 iter 40 value 91.881995 iter 50 value 91.880351 iter 60 value 91.878688 iter 70 value 91.737734 final value 91.737437 converged Fitting Repeat 1 # weights: 507 initial value 105.638828 iter 10 value 94.552547 iter 20 value 91.790420 iter 30 value 91.586428 iter 40 value 91.521943 iter 50 value 89.866820 iter 60 value 87.848845 iter 70 value 87.738964 iter 80 value 87.570910 iter 90 value 86.158034 iter 100 value 86.144863 final value 86.144863 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 121.704288 iter 10 value 94.331309 iter 20 value 93.732443 iter 30 value 86.853078 iter 40 value 85.761204 iter 50 value 85.753554 iter 60 value 85.741574 iter 70 value 85.530158 final value 85.529472 converged Fitting Repeat 3 # weights: 507 initial value 98.201073 iter 10 value 93.799443 iter 20 value 89.718590 iter 30 value 84.574741 iter 40 value 83.739285 iter 50 value 83.728259 iter 60 value 83.727648 iter 70 value 83.727142 iter 80 value 83.725000 iter 90 value 83.721663 final value 83.721175 converged Fitting Repeat 4 # weights: 507 initial value 124.801260 iter 10 value 94.492804 iter 20 value 94.459952 iter 30 value 93.833855 iter 40 value 88.267297 iter 50 value 88.258612 iter 60 value 88.257506 iter 70 value 88.256390 iter 80 value 88.256031 iter 90 value 85.972801 iter 100 value 84.775779 final value 84.775779 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 114.264390 iter 10 value 94.283869 iter 20 value 94.017002 iter 30 value 92.768738 iter 40 value 88.799174 iter 50 value 88.272650 iter 60 value 88.267747 iter 70 value 88.204898 iter 80 value 88.165825 iter 90 value 88.162844 iter 100 value 88.162166 final value 88.162166 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.610139 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 118.420698 final value 93.991525 converged Fitting Repeat 3 # weights: 103 initial value 103.737440 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.904540 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 102.171434 final value 93.836066 converged Fitting Repeat 1 # weights: 305 initial value 110.735684 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 96.173072 iter 10 value 93.153848 final value 93.153846 converged Fitting Repeat 3 # weights: 305 initial value 94.512754 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 108.860440 final value 93.481481 converged Fitting Repeat 5 # weights: 305 initial value 107.692471 iter 10 value 93.978619 final value 93.978617 converged Fitting Repeat 1 # weights: 507 initial value 102.363563 final value 93.836066 converged Fitting Repeat 2 # weights: 507 initial value 132.368876 iter 10 value 92.285922 iter 10 value 92.285922 iter 10 value 92.285922 final value 92.285922 converged Fitting Repeat 3 # weights: 507 initial value 108.413981 iter 10 value 93.038627 final value 92.966991 converged Fitting Repeat 4 # weights: 507 initial value 122.730963 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 99.074977 final value 94.052911 converged Fitting Repeat 1 # weights: 103 initial value 105.690474 iter 10 value 93.482153 iter 20 value 85.958639 iter 30 value 84.039501 iter 40 value 83.394101 iter 50 value 83.308520 iter 60 value 83.142278 iter 70 value 83.093220 final value 83.093137 converged Fitting Repeat 2 # weights: 103 initial value 98.108776 iter 10 value 94.055015 iter 20 value 93.336887 iter 30 value 93.248671 iter 40 value 93.220553 iter 50 value 91.493997 iter 60 value 83.903089 iter 70 value 81.850434 iter 80 value 81.409748 iter 90 value 81.170202 iter 100 value 80.927918 final value 80.927918 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.285941 iter 10 value 93.917479 iter 20 value 88.714957 iter 30 value 86.633059 iter 40 value 85.935877 iter 50 value 85.612757 iter 60 value 84.438661 iter 70 value 82.001067 iter 80 value 81.807905 iter 90 value 81.383273 iter 100 value 81.300279 final value 81.300279 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 105.396722 iter 10 value 94.006953 iter 20 value 93.729678 iter 30 value 84.910710 iter 40 value 84.492063 iter 50 value 84.122965 iter 60 value 83.306978 iter 70 value 82.867379 iter 80 value 81.600273 iter 90 value 81.006081 iter 100 value 80.964423 final value 80.964423 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 108.372194 iter 10 value 94.079149 iter 20 value 92.289700 iter 30 value 86.208056 iter 40 value 85.276683 iter 50 value 84.844037 iter 60 value 83.513577 iter 70 value 83.128402 iter 80 value 83.128171 final value 83.127179 converged Fitting Repeat 1 # weights: 305 initial value 103.489594 iter 10 value 94.168415 iter 20 value 86.130010 iter 30 value 84.173071 iter 40 value 83.819443 iter 50 value 83.442105 iter 60 value 83.290355 iter 70 value 83.186813 iter 80 value 82.628156 iter 90 value 81.750655 iter 100 value 80.843142 final value 80.843142 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.503130 iter 10 value 93.249427 iter 20 value 89.627062 iter 30 value 84.378349 iter 40 value 83.796625 iter 50 value 83.199638 iter 60 value 82.909380 iter 70 value 81.803626 iter 80 value 80.921663 iter 90 value 80.306337 iter 100 value 80.203013 final value 80.203013 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.790886 iter 10 value 94.230626 iter 20 value 92.012684 iter 30 value 90.737041 iter 40 value 84.949835 iter 50 value 82.601732 iter 60 value 81.144303 iter 70 value 80.269194 iter 80 value 79.940382 iter 90 value 79.836580 iter 100 value 79.783559 final value 79.783559 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.517286 iter 10 value 93.978354 iter 20 value 93.199113 iter 30 value 92.652613 iter 40 value 85.579231 iter 50 value 83.908252 iter 60 value 82.523755 iter 70 value 81.444057 iter 80 value 80.544996 iter 90 value 79.970301 iter 100 value 79.729054 final value 79.729054 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.833205 iter 10 value 93.892622 iter 20 value 88.112638 iter 30 value 87.182942 iter 40 value 86.188020 iter 50 value 85.371208 iter 60 value 84.527706 iter 70 value 82.957808 iter 80 value 81.740350 iter 90 value 80.808110 iter 100 value 80.369941 final value 80.369941 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 131.316913 iter 10 value 95.155647 iter 20 value 92.837857 iter 30 value 83.871078 iter 40 value 81.568962 iter 50 value 80.577352 iter 60 value 79.905627 iter 70 value 79.733643 iter 80 value 79.549818 iter 90 value 79.415089 iter 100 value 79.371322 final value 79.371322 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.735382 iter 10 value 93.963996 iter 20 value 93.486542 iter 30 value 86.623099 iter 40 value 83.939614 iter 50 value 83.138132 iter 60 value 82.915951 iter 70 value 82.850085 iter 80 value 82.788958 iter 90 value 82.467648 iter 100 value 81.909343 final value 81.909343 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.416499 iter 10 value 91.927670 iter 20 value 84.966601 iter 30 value 83.674474 iter 40 value 82.973655 iter 50 value 82.805146 iter 60 value 82.750052 iter 70 value 82.587671 iter 80 value 82.286247 iter 90 value 80.912553 iter 100 value 80.056137 final value 80.056137 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.890130 iter 10 value 86.238993 iter 20 value 83.825044 iter 30 value 83.603249 iter 40 value 83.029337 iter 50 value 81.870347 iter 60 value 80.547988 iter 70 value 80.046432 iter 80 value 79.895646 iter 90 value 79.707512 iter 100 value 79.624251 final value 79.624251 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 128.841976 iter 10 value 94.106477 iter 20 value 93.346601 iter 30 value 85.625848 iter 40 value 85.325142 iter 50 value 84.173519 iter 60 value 83.448865 iter 70 value 82.655494 iter 80 value 80.971038 iter 90 value 80.397774 iter 100 value 79.972997 final value 79.972997 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.254620 final value 94.054410 converged Fitting Repeat 2 # weights: 103 initial value 101.759330 final value 94.054672 converged Fitting Repeat 3 # weights: 103 initial value 103.358799 final value 93.837558 converged Fitting Repeat 4 # weights: 103 initial value 95.953785 final value 94.054837 converged Fitting Repeat 5 # weights: 103 initial value 104.468174 final value 94.054536 converged Fitting Repeat 1 # weights: 305 initial value 95.957846 iter 10 value 94.054242 final value 94.052933 converged Fitting Repeat 2 # weights: 305 initial value 101.224841 iter 10 value 94.057768 iter 20 value 94.027497 iter 30 value 85.583877 iter 40 value 82.786417 iter 50 value 82.602893 iter 60 value 81.866681 iter 70 value 81.415249 iter 80 value 80.775682 iter 90 value 79.518837 iter 100 value 78.949446 final value 78.949446 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.773561 iter 10 value 94.058905 iter 20 value 93.782585 iter 30 value 89.543084 iter 40 value 89.056454 iter 50 value 88.922594 iter 60 value 86.988290 iter 70 value 82.153114 iter 80 value 80.283600 iter 90 value 79.922533 iter 100 value 79.911593 final value 79.911593 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 124.069597 iter 10 value 94.057809 iter 20 value 94.053027 final value 94.053015 converged Fitting Repeat 5 # weights: 305 initial value 97.408966 iter 10 value 93.159657 iter 20 value 93.156854 iter 30 value 93.155823 iter 40 value 93.010944 iter 50 value 84.574872 iter 60 value 82.411221 iter 70 value 82.401256 iter 80 value 81.941668 iter 90 value 81.410269 iter 100 value 80.662783 final value 80.662783 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 97.703741 iter 10 value 94.059417 iter 20 value 91.984025 iter 30 value 84.504427 iter 40 value 84.245972 iter 50 value 84.216246 final value 84.216166 converged Fitting Repeat 2 # weights: 507 initial value 99.041097 iter 10 value 94.061174 iter 20 value 93.742355 iter 30 value 84.091972 iter 40 value 83.234859 iter 50 value 82.750009 iter 60 value 82.701665 iter 70 value 82.681436 iter 80 value 82.650755 iter 90 value 82.638024 iter 100 value 82.558054 final value 82.558054 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 99.613791 iter 10 value 94.060063 iter 20 value 93.950569 iter 30 value 93.327209 final value 93.327197 converged Fitting Repeat 4 # weights: 507 initial value 104.357675 iter 10 value 93.999727 iter 20 value 93.992864 iter 30 value 93.435398 iter 40 value 84.409953 iter 50 value 84.392561 final value 84.392213 converged Fitting Repeat 5 # weights: 507 initial value 113.559035 iter 10 value 93.999401 iter 20 value 93.332818 iter 30 value 93.328929 iter 40 value 89.117968 iter 50 value 82.881361 iter 60 value 82.629897 iter 60 value 82.629896 final value 82.629896 converged Fitting Repeat 1 # weights: 103 initial value 103.627930 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.023279 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 104.378545 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.984180 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 97.372415 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 97.215828 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 97.752226 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 96.858817 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 94.768199 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 110.553826 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 119.860156 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 104.080318 final value 94.466667 converged Fitting Repeat 3 # weights: 507 initial value 128.545344 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 108.572816 final value 94.466823 converged Fitting Repeat 5 # weights: 507 initial value 111.806737 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 106.165667 iter 10 value 94.462328 iter 20 value 91.937564 iter 30 value 84.873055 iter 40 value 84.306254 iter 50 value 84.070847 iter 60 value 83.187658 iter 70 value 82.784962 iter 80 value 82.583381 final value 82.583049 converged Fitting Repeat 2 # weights: 103 initial value 108.901484 iter 10 value 94.288164 iter 20 value 90.411850 iter 30 value 89.347344 iter 40 value 86.874984 iter 50 value 86.783414 iter 60 value 85.047532 iter 70 value 83.904119 iter 80 value 83.701897 iter 90 value 83.670386 iter 100 value 83.656241 final value 83.656241 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.761666 iter 10 value 94.488832 iter 20 value 90.333060 iter 30 value 84.879649 iter 40 value 84.623536 iter 50 value 84.493536 iter 60 value 84.457866 final value 84.457859 converged Fitting Repeat 4 # weights: 103 initial value 104.112651 iter 10 value 94.487073 iter 20 value 88.176492 iter 30 value 85.009338 iter 40 value 84.744452 iter 50 value 83.962265 iter 60 value 83.901034 iter 70 value 83.899889 iter 80 value 83.709640 iter 90 value 83.658499 iter 100 value 83.654905 final value 83.654905 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 99.520133 iter 10 value 93.037746 iter 20 value 85.121669 iter 30 value 84.821960 iter 40 value 84.560683 iter 50 value 84.497898 iter 60 value 84.462214 iter 70 value 84.457860 final value 84.457858 converged Fitting Repeat 1 # weights: 305 initial value 101.653165 iter 10 value 94.555587 iter 20 value 94.309449 iter 30 value 88.808116 iter 40 value 86.699207 iter 50 value 83.202827 iter 60 value 81.960281 iter 70 value 81.580663 iter 80 value 81.438166 iter 90 value 81.287198 iter 100 value 81.114706 final value 81.114706 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 116.729983 iter 10 value 94.423255 iter 20 value 87.178423 iter 30 value 84.904463 iter 40 value 84.491774 iter 50 value 83.596256 iter 60 value 83.430488 iter 70 value 83.392529 iter 80 value 83.372839 iter 90 value 83.272666 iter 100 value 82.766814 final value 82.766814 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.844137 iter 10 value 94.439396 iter 20 value 87.091097 iter 30 value 84.692573 iter 40 value 83.876514 iter 50 value 83.411774 iter 60 value 82.816590 iter 70 value 82.297783 iter 80 value 81.693018 iter 90 value 81.572004 iter 100 value 81.152311 final value 81.152311 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.416871 iter 10 value 94.377588 iter 20 value 91.272655 iter 30 value 87.178414 iter 40 value 85.977243 iter 50 value 85.879234 iter 60 value 84.688236 iter 70 value 82.756302 iter 80 value 82.083131 iter 90 value 81.645013 iter 100 value 81.447174 final value 81.447174 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.006985 iter 10 value 94.528035 iter 20 value 94.441173 iter 30 value 92.155428 iter 40 value 88.237384 iter 50 value 86.555330 iter 60 value 84.568101 iter 70 value 83.526402 iter 80 value 83.329346 iter 90 value 83.293360 iter 100 value 83.281142 final value 83.281142 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 112.361070 iter 10 value 94.076301 iter 20 value 88.736680 iter 30 value 86.792955 iter 40 value 86.115779 iter 50 value 84.438975 iter 60 value 83.973147 iter 70 value 82.703558 iter 80 value 81.284073 iter 90 value 80.834465 iter 100 value 80.556163 final value 80.556163 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.981124 iter 10 value 93.196651 iter 20 value 87.668905 iter 30 value 87.033481 iter 40 value 85.190055 iter 50 value 84.207738 iter 60 value 83.461880 iter 70 value 82.638899 iter 80 value 82.131106 iter 90 value 81.772696 iter 100 value 81.400401 final value 81.400401 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 134.882307 iter 10 value 95.236297 iter 20 value 93.939215 iter 30 value 87.368535 iter 40 value 84.723580 iter 50 value 84.627003 iter 60 value 84.343461 iter 70 value 83.500049 iter 80 value 83.231824 iter 90 value 82.867465 iter 100 value 82.128418 final value 82.128418 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.089385 iter 10 value 93.489673 iter 20 value 88.211902 iter 30 value 86.565212 iter 40 value 85.865856 iter 50 value 84.484734 iter 60 value 83.217204 iter 70 value 82.021317 iter 80 value 81.146728 iter 90 value 80.954634 iter 100 value 80.914384 final value 80.914384 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 131.013875 iter 10 value 94.374747 iter 20 value 89.666374 iter 30 value 85.072882 iter 40 value 84.091647 iter 50 value 83.619212 iter 60 value 83.546286 iter 70 value 83.385742 iter 80 value 83.315714 iter 90 value 83.297362 iter 100 value 83.286339 final value 83.286339 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.284090 final value 94.486218 converged Fitting Repeat 2 # weights: 103 initial value 102.494733 final value 94.485709 converged Fitting Repeat 3 # weights: 103 initial value 105.527320 iter 10 value 94.486397 iter 20 value 94.484902 iter 20 value 94.484902 iter 20 value 94.484902 final value 94.484902 converged Fitting Repeat 4 # weights: 103 initial value 101.495799 iter 10 value 94.485984 iter 20 value 94.448929 iter 30 value 93.547249 iter 40 value 93.411069 final value 93.410436 converged Fitting Repeat 5 # weights: 103 initial value 94.643251 final value 94.468643 converged Fitting Repeat 1 # weights: 305 initial value 94.999156 iter 10 value 94.489017 iter 20 value 94.436494 iter 30 value 86.327107 iter 40 value 86.298701 iter 50 value 86.258124 iter 60 value 85.153512 iter 70 value 85.093388 final value 85.093347 converged Fitting Repeat 2 # weights: 305 initial value 100.058106 iter 10 value 94.488976 iter 20 value 92.774610 iter 30 value 83.729000 final value 83.679111 converged Fitting Repeat 3 # weights: 305 initial value 99.059942 iter 10 value 94.489101 iter 20 value 94.402588 iter 30 value 87.126920 iter 40 value 83.307936 iter 50 value 81.961786 iter 60 value 81.938979 iter 70 value 81.938332 iter 80 value 81.936648 iter 90 value 81.735543 iter 100 value 81.582168 final value 81.582168 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 95.433292 iter 10 value 89.993491 iter 20 value 89.213020 iter 30 value 88.781120 iter 40 value 88.774161 iter 50 value 87.814802 iter 60 value 87.806921 iter 70 value 87.792828 iter 80 value 87.627092 iter 90 value 87.583334 iter 100 value 87.470619 final value 87.470619 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.959293 iter 10 value 94.490047 iter 20 value 94.484337 iter 30 value 85.816849 iter 40 value 83.679353 iter 50 value 83.650286 iter 60 value 82.738893 iter 70 value 82.490604 iter 80 value 81.959060 iter 90 value 81.563385 iter 100 value 81.034074 final value 81.034074 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 97.088647 iter 10 value 94.491066 iter 20 value 94.291646 iter 30 value 86.561179 iter 40 value 86.321400 iter 50 value 84.761977 iter 60 value 83.415680 iter 70 value 81.443576 iter 80 value 79.640094 iter 90 value 79.388910 iter 100 value 78.830863 final value 78.830863 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.468626 iter 10 value 94.485416 iter 20 value 94.475413 iter 30 value 94.472379 iter 40 value 94.467047 iter 50 value 94.376338 iter 60 value 91.839330 iter 70 value 91.313111 iter 80 value 91.105703 iter 90 value 91.102777 iter 100 value 86.924399 final value 86.924399 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 100.955242 iter 10 value 94.474484 iter 20 value 94.381558 iter 30 value 86.587419 iter 40 value 82.489457 iter 50 value 81.401278 iter 60 value 81.324964 iter 70 value 81.320950 iter 80 value 81.109527 iter 90 value 80.769175 iter 100 value 80.621850 final value 80.621850 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 98.679161 iter 10 value 94.490522 iter 20 value 94.434710 iter 30 value 85.781808 iter 40 value 85.427931 iter 50 value 80.540774 iter 60 value 80.092106 iter 70 value 79.729889 iter 80 value 79.615078 iter 90 value 79.484721 iter 100 value 79.484304 final value 79.484304 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.999786 iter 10 value 94.474787 iter 20 value 94.426555 final value 94.424959 converged Fitting Repeat 1 # weights: 103 initial value 96.231519 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 105.959427 final value 94.354396 converged Fitting Repeat 3 # weights: 103 initial value 97.267427 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 101.728819 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 100.715720 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 103.675539 iter 10 value 94.450026 final value 94.448053 converged Fitting Repeat 2 # weights: 305 initial value 116.021911 iter 10 value 94.342266 iter 20 value 94.309530 final value 94.309524 converged Fitting Repeat 3 # weights: 305 initial value 96.758784 iter 10 value 93.464290 final value 93.464286 converged Fitting Repeat 4 # weights: 305 initial value 107.501841 iter 10 value 94.164132 iter 20 value 94.127703 final value 94.076279 converged Fitting Repeat 5 # weights: 305 initial value 100.872644 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 105.620344 iter 10 value 94.457149 iter 20 value 94.448105 final value 94.448052 converged Fitting Repeat 2 # weights: 507 initial value 95.051368 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 118.711166 final value 94.354396 converged Fitting Repeat 4 # weights: 507 initial value 101.128140 iter 10 value 94.228736 iter 20 value 94.082831 final value 94.076279 converged Fitting Repeat 5 # weights: 507 initial value 117.494485 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 98.912037 iter 10 value 94.483100 iter 20 value 94.289849 iter 30 value 94.189757 iter 40 value 94.135388 iter 50 value 92.570933 iter 60 value 87.067116 iter 70 value 85.980695 iter 80 value 85.327114 iter 90 value 85.038512 iter 100 value 84.811906 final value 84.811906 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 98.514494 iter 10 value 94.539057 iter 20 value 92.857732 iter 30 value 86.461080 iter 40 value 83.627073 iter 50 value 83.252274 iter 60 value 82.594099 iter 70 value 82.373009 iter 70 value 82.373009 final value 82.373009 converged Fitting Repeat 3 # weights: 103 initial value 101.209936 iter 10 value 94.486545 iter 20 value 94.394384 iter 30 value 92.440439 iter 40 value 91.878765 iter 50 value 87.487386 iter 60 value 85.768703 iter 70 value 85.239850 iter 80 value 84.780591 iter 90 value 84.355574 final value 84.333668 converged Fitting Repeat 4 # weights: 103 initial value 98.836896 iter 10 value 94.513051 iter 20 value 91.735032 iter 30 value 89.743323 iter 40 value 87.497765 iter 50 value 86.573726 iter 60 value 86.316985 iter 70 value 85.935540 iter 80 value 82.607534 iter 90 value 82.221052 final value 82.115191 converged Fitting Repeat 5 # weights: 103 initial value 97.521611 iter 10 value 94.488443 iter 20 value 93.998595 iter 30 value 93.857539 iter 40 value 93.830728 iter 50 value 93.829636 iter 60 value 93.829304 iter 70 value 90.922391 iter 80 value 88.159572 iter 90 value 88.044206 iter 100 value 86.747288 final value 86.747288 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 101.807862 iter 10 value 94.400886 iter 20 value 89.035175 iter 30 value 86.456141 iter 40 value 85.567651 iter 50 value 85.287191 iter 60 value 84.812680 iter 70 value 84.385591 iter 80 value 83.464136 iter 90 value 82.434555 iter 100 value 82.255805 final value 82.255805 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.075947 iter 10 value 94.631100 iter 20 value 90.828326 iter 30 value 88.538009 iter 40 value 88.041769 iter 50 value 87.934765 iter 60 value 85.103382 iter 70 value 84.430125 iter 80 value 83.758977 iter 90 value 82.134284 iter 100 value 81.222981 final value 81.222981 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.656306 iter 10 value 94.525405 iter 20 value 94.286631 iter 30 value 87.030616 iter 40 value 86.569638 iter 50 value 85.644914 iter 60 value 84.677416 iter 70 value 84.504810 iter 80 value 83.948273 iter 90 value 82.800770 iter 100 value 82.195968 final value 82.195968 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.426731 iter 10 value 94.395306 iter 20 value 91.862917 iter 30 value 89.300669 iter 40 value 84.249792 iter 50 value 82.419292 iter 60 value 81.740687 iter 70 value 81.160448 iter 80 value 81.119507 iter 90 value 81.066656 iter 100 value 81.040568 final value 81.040568 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.726342 iter 10 value 94.458087 iter 20 value 92.751491 iter 30 value 91.945842 iter 40 value 86.957798 iter 50 value 86.405013 iter 60 value 85.440895 iter 70 value 83.429523 iter 80 value 82.349562 iter 90 value 81.775734 iter 100 value 81.157164 final value 81.157164 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 127.247892 iter 10 value 94.463757 iter 20 value 94.178249 iter 30 value 92.017298 iter 40 value 88.878361 iter 50 value 86.297145 iter 60 value 84.405019 iter 70 value 81.748014 iter 80 value 80.994570 iter 90 value 80.930656 iter 100 value 80.682773 final value 80.682773 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 123.548934 iter 10 value 94.452904 iter 20 value 91.884286 iter 30 value 88.121839 iter 40 value 83.943678 iter 50 value 82.427671 iter 60 value 82.017069 iter 70 value 81.681575 iter 80 value 81.352992 iter 90 value 81.324825 iter 100 value 81.277114 final value 81.277114 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 130.119540 iter 10 value 95.929933 iter 20 value 91.024952 iter 30 value 87.136965 iter 40 value 85.006500 iter 50 value 84.442308 iter 60 value 83.214029 iter 70 value 82.432615 iter 80 value 81.661265 iter 90 value 81.491943 iter 100 value 81.288249 final value 81.288249 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 115.091413 iter 10 value 95.459849 iter 20 value 94.226892 iter 30 value 92.205418 iter 40 value 85.294583 iter 50 value 85.203724 iter 60 value 83.558005 iter 70 value 82.184793 iter 80 value 81.723237 iter 90 value 80.913367 iter 100 value 80.253339 final value 80.253339 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.551156 iter 10 value 94.159799 iter 20 value 87.541486 iter 30 value 85.482227 iter 40 value 85.273865 iter 50 value 85.161125 iter 60 value 83.538789 iter 70 value 81.905449 iter 80 value 81.105805 iter 90 value 80.799245 iter 100 value 80.354938 final value 80.354938 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.498672 final value 94.485814 converged Fitting Repeat 2 # weights: 103 initial value 95.678591 iter 10 value 92.644093 iter 20 value 92.365335 iter 30 value 92.105849 iter 40 value 90.796318 iter 50 value 90.794605 iter 60 value 90.794137 iter 70 value 90.793423 final value 90.793386 converged Fitting Repeat 3 # weights: 103 initial value 103.989655 final value 94.486071 converged Fitting Repeat 4 # weights: 103 initial value 96.328996 final value 94.485810 converged Fitting Repeat 5 # weights: 103 initial value 97.828000 final value 94.485701 converged Fitting Repeat 1 # weights: 305 initial value 101.900328 iter 10 value 94.489638 iter 20 value 94.439736 iter 30 value 91.341476 iter 40 value 84.095309 iter 50 value 81.445492 iter 60 value 81.415869 iter 70 value 81.414957 iter 80 value 81.414219 iter 90 value 81.404405 iter 100 value 81.257249 final value 81.257249 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 96.269417 iter 10 value 94.485595 iter 20 value 91.358244 iter 30 value 90.544824 iter 40 value 90.075229 iter 50 value 90.073859 iter 60 value 90.073103 final value 90.072386 converged Fitting Repeat 3 # weights: 305 initial value 98.846514 iter 10 value 93.608665 iter 20 value 92.221542 iter 30 value 90.793987 iter 40 value 90.681045 iter 50 value 90.596758 iter 60 value 90.596334 iter 70 value 90.596261 final value 90.596228 converged Fitting Repeat 4 # weights: 305 initial value 120.796783 iter 10 value 94.489036 iter 20 value 91.327081 final value 88.330198 converged Fitting Repeat 5 # weights: 305 initial value 104.828053 iter 10 value 94.488934 iter 20 value 94.484224 iter 30 value 94.299934 iter 40 value 90.230306 iter 50 value 84.887547 iter 60 value 82.649951 iter 70 value 82.510554 iter 80 value 81.110156 iter 90 value 80.597595 iter 100 value 80.589452 final value 80.589452 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.247219 iter 10 value 94.465888 iter 20 value 94.463427 iter 30 value 93.286279 iter 40 value 87.797153 iter 50 value 87.796241 iter 50 value 87.796241 final value 87.796195 converged Fitting Repeat 2 # weights: 507 initial value 99.824442 iter 10 value 94.491603 iter 20 value 93.803391 iter 30 value 88.198195 iter 40 value 88.142311 iter 50 value 86.147504 iter 60 value 82.476388 iter 70 value 82.264371 iter 80 value 82.173798 iter 90 value 82.172763 iter 100 value 82.165200 final value 82.165200 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.723011 iter 10 value 93.576467 iter 20 value 93.570066 final value 93.568571 converged Fitting Repeat 4 # weights: 507 initial value 131.005188 iter 10 value 94.444437 iter 20 value 94.114563 iter 30 value 88.566421 iter 40 value 87.528633 iter 50 value 86.987617 iter 60 value 86.178180 iter 70 value 84.557901 iter 80 value 84.119310 iter 90 value 82.782276 iter 100 value 81.930623 final value 81.930623 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.547562 iter 10 value 94.140856 iter 20 value 94.136031 iter 30 value 94.115860 iter 40 value 94.060271 iter 50 value 94.058652 iter 60 value 94.058626 iter 70 value 94.058578 final value 94.058568 converged Fitting Repeat 1 # weights: 507 initial value 139.249549 iter 10 value 117.898546 iter 20 value 117.826290 iter 30 value 116.279550 iter 40 value 115.010655 final value 114.706405 converged Fitting Repeat 2 # weights: 507 initial value 124.363601 iter 10 value 117.216549 iter 20 value 117.210935 iter 30 value 107.285119 iter 40 value 107.185134 iter 50 value 107.184356 iter 60 value 107.183786 iter 70 value 107.182786 iter 70 value 107.182785 final value 107.182785 converged Fitting Repeat 3 # weights: 507 initial value 141.193110 iter 10 value 117.903020 iter 20 value 117.800538 final value 117.760033 converged Fitting Repeat 4 # weights: 507 initial value 128.081861 iter 10 value 117.765937 iter 20 value 117.633848 iter 30 value 117.608016 iter 40 value 117.607940 iter 40 value 117.607940 iter 40 value 117.607940 final value 117.607940 converged Fitting Repeat 5 # weights: 507 initial value 115.462921 iter 10 value 109.806005 iter 20 value 109.164118 iter 30 value 108.445100 iter 40 value 108.402955 iter 50 value 107.140933 iter 60 value 106.867063 iter 70 value 106.828106 final value 106.828101 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Sat Mar 25 04:44:23 2023 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 52.396 1.379 64.790
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 36.662 | 0.444 | 37.115 | |
FreqInteractors | 0.268 | 0.016 | 0.287 | |
calculateAAC | 0.036 | 0.012 | 0.049 | |
calculateAutocor | 0.692 | 0.016 | 0.709 | |
calculateCTDC | 0.098 | 0.000 | 0.098 | |
calculateCTDD | 0.804 | 0.008 | 0.812 | |
calculateCTDT | 0.255 | 0.004 | 0.258 | |
calculateCTriad | 0.422 | 0.016 | 0.437 | |
calculateDC | 0.138 | 0.000 | 0.138 | |
calculateF | 0.386 | 0.000 | 0.386 | |
calculateKSAAP | 0.133 | 0.000 | 0.132 | |
calculateQD_Sm | 2.340 | 0.055 | 2.397 | |
calculateTC | 2.229 | 0.088 | 2.318 | |
calculateTC_Sm | 0.343 | 0.000 | 0.344 | |
corr_plot | 36.911 | 0.312 | 37.225 | |
enrichfindP | 0.417 | 0.044 | 15.211 | |
enrichfind_hp | 0.044 | 0.008 | 1.329 | |
enrichplot | 0.336 | 0.032 | 0.368 | |
filter_missing_values | 0.001 | 0.000 | 0.001 | |
getFASTA | 0.700 | 0.020 | 6.803 | |
getHPI | 0.001 | 0.000 | 0.000 | |
get_negativePPI | 0.002 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.001 | 0.000 | 0.002 | |
plotPPI | 0.078 | 0.000 | 0.078 | |
pred_ensembel | 17.450 | 0.400 | 15.555 | |
var_imp | 38.989 | 0.512 | 39.505 | |