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This page was generated on 2023-03-27 05:50:31 -0000 (Mon, 27 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6083
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INSTALL results for chihaya on kunpeng1


To the developers/maintainers of the chihaya package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/chihaya.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
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raw results

Package 317/2195HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chihaya 0.99.2  (landing page)
Aaron Lun
Snapshot Date: 2023-03-24 01:40:07 -0000 (Fri, 24 Mar 2023)
git_url: https://git.bioconductor.org/packages/chihaya
git_branch: devel
git_last_commit: 07c3ab8
git_last_commit_date: 2023-02-20 06:28:57 -0000 (Mon, 20 Feb 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    OK    WARNINGS  

Summary

Package: chihaya
Version: 0.99.2
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL chihaya
StartedAt: 2023-03-24 03:48:33 -0000 (Fri, 24 Mar 2023)
EndedAt: 2023-03-24 03:49:24 -0000 (Fri, 24 Mar 2023)
EllapsedTime: 50.8 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL chihaya
###
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library’
* installing *source* package ‘chihaya’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
using C++17
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/include" -DNDEBUG -I../inst/include -D USE_HDF5=1 -D USE_ZLIB=1 -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/include' -I/usr/local/include    -fPIC  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/include" -DNDEBUG -I../inst/include -D USE_HDF5=1 -D USE_ZLIB=1 -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/include' -I/usr/local/include    -fPIC  -g -O2  -c get_best_type.cpp -o get_best_type.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/include" -DNDEBUG -I../inst/include -D USE_HDF5=1 -D USE_ZLIB=1 -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/include' -I/usr/local/include    -fPIC  -g -O2  -c h5exists.cpp -o h5exists.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/include" -DNDEBUG -I../inst/include -D USE_HDF5=1 -D USE_ZLIB=1 -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/include' -I/usr/local/include    -fPIC  -g -O2  -c validate.cpp -o validate.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/include" -DNDEBUG -I../inst/include -D USE_HDF5=1 -D USE_ZLIB=1 -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/lib/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/include' -I/usr/local/include    -fPIC  -g -O2  -c write_scalar.cpp -o write_scalar.o
g++ -std=gnu++17 -shared -L/usr/local/lib -o chihaya.so RcppExports.o get_best_type.o h5exists.o validate.o write_scalar.o /home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/lib/libhdf5_cpp.a /home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/Rhdf5lib/lib/libhdf5.a -lcrypto -lcurl -lsz -laec -lz -ldl -lm
installing to /home/biocbuild/bbs-3.17-bioc/R-devel_2023-03-12_r83975-bin/site-library/00LOCK-chihaya/00new/chihaya/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (chihaya)