Back to Build/check report for BioC 3.17:   simplified   long
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This page was generated on 2023-03-27 05:50:33 -0000 (Mon, 27 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6083
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for epigraHMM on kunpeng1


To the developers/maintainers of the epigraHMM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/epigraHMM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 629/2195HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epigraHMM 1.7.2  (landing page)
Pedro Baldoni
Snapshot Date: 2023-03-24 01:40:07 -0000 (Fri, 24 Mar 2023)
git_url: https://git.bioconductor.org/packages/epigraHMM
git_branch: devel
git_last_commit: 3fad014
git_last_commit_date: 2023-03-22 21:58:28 -0000 (Wed, 22 Mar 2023)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: epigraHMM
Version: 1.7.2
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epigraHMM
StartedAt: 2023-03-24 09:10:56 -0000 (Fri, 24 Mar 2023)
EndedAt: 2023-03-24 09:16:27 -0000 (Fri, 24 Mar 2023)
EllapsedTime: 330.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epigraHMM
###
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* checking for file ‘epigraHMM/DESCRIPTION’ ... OK
* preparing ‘epigraHMM’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘epigraHMM.Rmd’ using rmarkdown
Quitting from lines 191-212 (epigraHMM.Rmd) 
Error: processing vignette 'epigraHMM.Rmd' failed with diagnostics:
there is no package called 'BSgenome.Rnorvegicus.UCSC.rn4'
--- failed re-building ‘epigraHMM.Rmd’

SUMMARY: processing the following file failed:
  ‘epigraHMM.Rmd’

Error: Vignette re-building failed.
Execution halted