Back to Build/check report for BioC 3.17:   simplified   long
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This page was generated on 2023-03-27 05:50:33 -0000 (Mon, 27 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng1Linux (Ubuntu 22.04.1 LTS)aarch64R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences" 6083
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for exomePeak2 on kunpeng1


To the developers/maintainers of the exomePeak2 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/exomePeak2.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 655/2195HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
exomePeak2 1.11.0  (landing page)
Zhen Wei
Snapshot Date: 2023-03-24 01:40:07 -0000 (Fri, 24 Mar 2023)
git_url: https://git.bioconductor.org/packages/exomePeak2
git_branch: devel
git_last_commit: 1b9534d
git_last_commit_date: 2022-11-01 15:21:28 -0000 (Tue, 01 Nov 2022)
kunpeng1Linux (Ubuntu 22.04.1 LTS) / aarch64  OK    ERROR  skipped

Summary

Package: exomePeak2
Version: 1.11.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data exomePeak2
StartedAt: 2023-03-24 09:20:12 -0000 (Fri, 24 Mar 2023)
EndedAt: 2023-03-24 09:21:19 -0000 (Fri, 24 Mar 2023)
EllapsedTime: 67.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data exomePeak2
###
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* checking for file ‘exomePeak2/DESCRIPTION’ ... OK
* preparing ‘exomePeak2’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Vignette_V_2.00.Rmd’ using rmarkdown
Quitting from lines 50-71 (Vignette_V_2.00.Rmd) 
Error: processing vignette 'Vignette_V_2.00.Rmd' failed with diagnostics:
Looks like you have more than one installed BSgenome data package
  that matches genome: hg19
  Please disambiguate by specifying the full name of the package you want
  to use (use 'installed.genomes()' to get the list).
--- failed re-building ‘Vignette_V_2.00.Rmd’

SUMMARY: processing the following file failed:
  ‘Vignette_V_2.00.Rmd’

Error: Vignette re-building failed.
Execution halted