Build/check report for BioC 3.18 - CHECK results for BgeeDB on kunpeng1

Hostname	OS	Arch (*)	R version	Installed pkgs
kunpeng1	Linux (Ubuntu 22.04.1 LTS)	aarch64	R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences"	6211
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:BgeeDB.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings BgeeDB_2.27.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck’
* using R Under development (unstable) (2023-03-12 r83975)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
    GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
* running under: Ubuntu 22.04.2 LTS
* using session charset: UTF-8
* checking for file ‘BgeeDB/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘BgeeDB’ version ‘2.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘BgeeDB’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘BgeeDB-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geneList
> ### Title: Example of gene list object used to run a topAnat enrichment
> ###   test, created on June 2018. The format of the gene list is the same
> ###   as the gene list required to build a 'topGOdata' object in the
> ###   'topGO' package: a vector with background genes as names, and 0 or 1
> ###   values depending if a gene is in the foreground or not. In this
> ###   example the foreground genes are zebrafish genes with an annotated
> ###   phenotype related to "pectoral fin", and the background is composed
> ###   of all zebrafish Ensembl genes with an annotated phenotype from ZFIN.
> ###   The gene list was built using the biomaRt package, and the code used
> ###   can be found in the vignette of the package.
> ### Aliases: geneList
> ### Keywords: datasets
> 
> ### ** Examples
> 
> bgee <- Bgee$new(species = "Danio_rerio")

NOTE: You did not specify any data type. The argument dataType will be set to c("rna_seq","affymetrix","est","in_situ","sc_full_length") for the next steps.

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359
> myTopAnatData <- loadTopAnatData(bgee)

Building URLs to retrieve organ relationships from Bgee.........
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_anat_entity_relations&display_type=tsv&species_list=7955&attr_list=SOURCE_ID&attr_list=TARGET_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0)
   Submitting URL to Bgee webservice (can be long)
   Got results from Bgee webservice. Files are written in "/home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/Danio_rerio_Bgee_15_0"

Building URLs to retrieve organ names from Bgee.................
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_anat_entities&display_type=tsv&species_list=7955&attr_list=ID&attr_list=NAME&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0)
   Submitting URL to Bgee webservice (can be long)
   Got results from Bgee webservice. Files are written in "/home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/Danio_rerio_Bgee_15_0"

Building URLs to retrieve mapping of gene to organs from Bgee...
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=7955&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_qual=SILVER)
   Submitting URL to Bgee webservice (can be long)
Warning in download.file(url = url, destfile = destfile, quiet = quiet) :
  downloaded length 5368359121760235870414891528490663964317552158853786016275609710822194178695399138893332719749836647836800813529008606250955986594182807812773770643717048831262137586111765449802483529491827008662386243580906798949335727840241334432659215154402243379200 != reported length 0
Warning in download.file(url = url, destfile = destfile, quiet = quiet) :
  cannot open URL 'https://bgee.org/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=7955&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_qual=SILVER': HTTP status was '502 Bad Gateway'
Error in download.file(url = url, destfile = destfile, quiet = quiet) : 
  cannot open URL 'https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=7955&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_qual=SILVER'
Calls: loadTopAnatData -> bgee_download_file -> download.file
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
      ▆
   1. └─BgeeDB::loadTopAnatData(bgee, stage = "UBERON:0000092") at test_loadTopAnatData.R:6:2
   2.   └─BgeeDB:::bgee_download_file(...)
   3.     └─utils::download.file(url = url, destfile = destfile, quiet = quiet)
  ── Error ('test_topAnat.R:6:3'): Creating the topAnat object is working ────────
  Error in `download.file(url = url, destfile = destfile, quiet = quiet)`: cannot open URL 'https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=9913&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_type=RNA_SEQ&data_qual=SILVER&stage_id=UBERON:0000092'
  Backtrace:
      ▆
   1. └─BgeeDB::loadTopAnatData(bgee, stage = "UBERON:0000092") at test_topAnat.R:6:2
   2.   └─BgeeDB:::bgee_download_file(...)
   3.     └─utils::download.file(url = url, destfile = destfile, quiet = quiet)
  
  [ FAIL 2 | WARN 9 | SKIP 0 | PASS 22 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘BgeeDB_Manual.Rmd’ using ‘UTF-8’... OK
 NONE
* checking re-building of vignette outputs ...


R Under development (unstable) (2023-03-12 r83975) -- "Unsuffered Consequences"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu (64-bit)

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Type 'license()' or 'licence()' for distribution details.

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Type 'contributors()' for more information and
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Type 'demo()' for some demos, 'help()' for on-line help, or
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Type 'q()' to quit R.

> library(testthat)
> library(BgeeDB)
Loading required package: topGO
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Loading required package: graph
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    I, expand.grid, unname


Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve


groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.

Attaching package: 'topGO'

The following object is masked from 'package:IRanges':

    members

Loading required package: tidyr

Attaching package: 'tidyr'

The following object is masked from 'package:S4Vectors':

    expand

The following object is masked from 'package:testthat':

    matches

> 
> Sys.setenv("R_TESTS" = "")
> test_check("BgeeDB")

Querying Bgee to get release information...

Building URL to query species in Bgee release 15_0...

Submitting URL to Bgee webservice... (https://bgee.org/bgee15_0/api/?page=r_package&action=get_all_species&display_type=tsv&source=BgeeDB_R_package&source_version=2.27.0)

Query to Bgee webservice successful!

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

Saved annotation files in /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Mus_musculus_Bgee_15_0 folder.

Extracting expression data matrix...
  Keeping only present genes.

Extracting features information...

Extracting samples information...

Extracting expression data matrix...
  Keeping only present genes.

Extracting features information...

Extracting samples information...

Extracting expression data matrix...
  Keeping only present genes.

Extracting features information...

Extracting samples information...

Querying Bgee to get release information...

Building URL to query species in Bgee release 13_2...

Submitting URL to Bgee webservice... (https://r.bgee.org/bgee13/?page=species&display_type=tsv&source=BgeeDB_R_package&source_version=2.27.0)

Query to Bgee webservice successful!

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

IMPORTANT INFORMATION: Be careful! You are not using the last release of the Bgee database! If it is not intentional you should update to the last version of Bioconductor and of the BgeeDB package. To update Bioconductor, see https://www.bioconductor.org/install/

Saved annotation files in /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Mus_musculus_Bgee_13_2 folder.

Extracting expression data matrix...
  Keeping only present genes.

Extracting features information...

Extracting samples information...

Extracting expression data matrix...
  Keeping only present genes.

Extracting features information...

Extracting samples information...

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

Saved annotation files in /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Mus_musculus_Bgee_15_0 folder.

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 13_2 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

IMPORTANT INFORMATION: Be careful! You are not using the last release of the Bgee database! If it is not intentional you should update to the last version of Bioconductor and of the BgeeDB package. To update Bioconductor, see https://www.bioconductor.org/install/

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 13_2 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

IMPORTANT INFORMATION: Be careful! You are not using the last release of the Bgee database! If it is not intentional you should update to the last version of Bioconductor and of the BgeeDB package. To update Bioconductor, see https://www.bioconductor.org/install/

Saved annotation files in /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Mus_musculus_Bgee_13_2 folder.

Querying Bgee to get release information...

Building URL to query species in Bgee release 14_2...

Submitting URL to Bgee webservice... (https://r.bgee.org/bgee14_2/?page=r_package&action=get_all_species&display_type=tsv&source=BgeeDB_R_package&source_version=2.27.0)

Query to Bgee webservice successful!

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

Building URLs to retrieve organ relationships from Bgee.........
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_anat_entity_relations&display_type=tsv&species_list=9913&attr_list=SOURCE_ID&attr_list=TARGET_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0)
   Submitting URL to Bgee webservice (can be long)
   Got results from Bgee webservice. Files are written in "/home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Bos_taurus_Bgee_15_0"

Building URLs to retrieve organ names from Bgee.................
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_anat_entities&display_type=tsv&species_list=9913&attr_list=ID&attr_list=NAME&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0)
   Submitting URL to Bgee webservice (can be long)
   Got results from Bgee webservice. Files are written in "/home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Bos_taurus_Bgee_15_0"

Building URLs to retrieve mapping of gene to organs from Bgee...
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=9913&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_type=RNA_SEQ&data_qual=SILVER&stage_id=UBERON:0000092)
   Submitting URL to Bgee webservice (can be long)

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

Saved annotation files in /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Drosophila_simulans_Bgee_15_0 folder.

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

Querying Bgee to get release information...

NOTE: the file describing Bgee species information for release 15_0 was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat. Data will not be redownloaded.

API key built: edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359

NOTE: an organ relationships file was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Bos_taurus_Bgee_15_0. Data will not be redownloaded.

NOTE: an organ names file was found in the download directory /home/biocbuild/bbs-3.17-bioc/meat/BgeeDB.Rcheck/tests/testthat/Bos_taurus_Bgee_15_0. Data will not be redownloaded.

Building URLs to retrieve mapping of gene to organs from Bgee...
   URL successfully built (https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=9913&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_type=RNA_SEQ&data_qual=SILVER&stage_id=UBERON:0000092)
   Submitting URL to Bgee webservice (can be long)
[ FAIL 2 | WARN 9 | SKIP 0 | PASS 22 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loadTopAnatData.R:6:3'): Loading of topAnatData files is working ──
Error in `download.file(url = url, destfile = destfile, quiet = quiet)`: cannot open URL 'https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=9913&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_type=RNA_SEQ&data_qual=SILVER&stage_id=UBERON:0000092'
Backtrace:
    ▆
 1. └─BgeeDB::loadTopAnatData(bgee, stage = "UBERON:0000092") at test_loadTopAnatData.R:6:2
 2.   └─BgeeDB:::bgee_download_file(...)
 3.     └─utils::download.file(url = url, destfile = destfile, quiet = quiet)
── Error ('test_topAnat.R:6:3'): Creating the topAnat object is working ────────
Error in `download.file(url = url, destfile = destfile, quiet = quiet)`: cannot open URL 'https://bgee.org/bgee15_0/api/?page=r_package&action=get_expression_calls&display_type=tsv&species_list=9913&attr_list=GENE_ID&attr_list=ANAT_ENTITY_ID&api_key=edaed93863a3b3373bf8fe3eff43954c3249d76c868f7e4a44016d1d84d63a6934bf970fa3354e8248f5f3ea6e4c791187e7e1cafcaf44d51468c47d71575359&source=BgeeDB_R_package&source_version=2.27.0&data_type=RNA_SEQ&data_qual=SILVER&stage_id=UBERON:0000092'
Backtrace:
    ▆
 1. └─BgeeDB::loadTopAnatData(bgee, stage = "UBERON:0000092") at test_topAnat.R:6:2
 2.   └─BgeeDB:::bgee_download_file(...)
 3.     └─utils::download.file(url = url, destfile = destfile, quiet = quiet)

[ FAIL 2 | WARN 9 | SKIP 0 | PASS 22 ]
Error: Test failures
Execution halted

name	user	system	elapsed
Bgee-class	0.540	0.004	3.541
deleteLocalData	8.011	1.061	14.215
deleteOldData	0.179	0.000	1.002
formatData	4.755	0.583	10.014

CHECK results for BgeeDB on kunpeng1

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Command output

Installation output

Tests output

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